| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yghZ [H]
Identifier: 62390148
GI number: 62390148
Start: 1328630
End: 1329715
Strand: Direct
Name: yghZ [H]
Synonym: cg1423
Alternate gene names: 62390148
Gene position: 1328630-1329715 (Clockwise)
Preceding gene: 62390147
Following gene: 62390150
Centisome position: 40.47
GC content: 53.04
Gene sequence:
>1086_bases ATGGCTGTCATGGCATATCAACCAGCAGACAATCGCTATGACGACATGATCTACCGCAGGGTGGGAAATTCTGGGCTGAA GCTTCCGGCAATTTCGCTTGGGCTGTGGCACAACTTCGGTGATGACAAGCCGCTTTCAACGCAGCGCAGCATTATTCACC GCGCGTTTGATAGGGGAGTCACTCACTTCGATTTGGCTAATAACTATGGACCTCCAGCAGGTTCCGCAGAGACCAACTTT GGCAGGATTTTGCGTGAGGATCTCAAAAGCCACCGCGATGAGTTGATCATTTCTTCCAAGGCGGGTTGGGATATGTGGCC TGGACCTTATGGTTTTGGTGGTTCCCGAAAGTATCTAGTGAGTTCCCTTGATCAGTCCCTGACTCGCCTCGGCTTGGATT ACGTGGATATTTTCTATCATCACCGCCCGGATCCAGATACTCCTTTGGAAGAAACCATGTACGCATTGCGTGACATTGTT GCGTCTGGAAAGGCTCTTTACGTGGGTATTTCTTCCTACGGTCCAGAGCTCACAGCGGAGGCGGCTGAGTTCATGGCGGA GGAGGGCTGCCCGCTTCTGATTCATCAGCCAAGCTATTCCATCATTAATCGTTGGGTGGAGGAACCGGGCGATGACGGTG AGAACTTGTTGCAGTCAGCTGCCAACAATGGTCTTGGCGTCATTGCTTTCTCACCACTTGCGCAGGGCCTGCTCACGGAC AAATATCTCGATGGAATTCCAGAGGGTTCCCGCGCCAGCCAGGGTAAGTCCCTGTCTGAGGGCATGTTGAACGTGAACAA TATTGATATGGTCCGCAAGCTCAATGACATCGCCCAGGAACGCGGGCAGTCACTTGCGCAGATGGCGCTTGCATGGGTGC TGCGCGAGCAAGGAGAGTACGGCGCGGATACCGTGACCAGTGCATTGATTGGTGCTTCGTCAGTTGAGCAGCTGGACAAC AGCCTTGATTCACTCAACAACTTGGAGTTTTCTGACGCCGAGTTGGAGGCGATCGATGAGATTTCCCACGACGCCGGCAT CAACATTTGGGCGAAGGCCACCGATTCCAAAACCCGCGAAAACTAA
Upstream 100 bases:
>100_bases CTCAAAAGCACTGATAAAAGCAGTCAACCCACCTCGGGTTGGCTGCTTTTTTGCATCCAGATGCACAAAGCCGTGGCACA AACGAGACAAACTGAGCACA
Downstream 100 bases:
>100_bases CCCATCAACATCAGTTTGATGGCCAATGCGGTCATCACAACTGCCACGACGACGTTGATCCAGCGCCACACCTTGGGGCT GGACAGCGGGCGTGACAATG
Product: oxidoreductase (related to aryl-alcohol dehydrogenase)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAVMAYQPADNRYDDMIYRRVGNSGLKLPAISLGLWHNFGDDKPLSTQRSIIHRAFDRGVTHFDLANNYGPPAGSAETNF GRILREDLKSHRDELIISSKAGWDMWPGPYGFGGSRKYLVSSLDQSLTRLGLDYVDIFYHHRPDPDTPLEETMYALRDIV ASGKALYVGISSYGPELTAEAAEFMAEEGCPLLIHQPSYSIINRWVEEPGDDGENLLQSAANNGLGVIAFSPLAQGLLTD KYLDGIPEGSRASQGKSLSEGMLNVNNIDMVRKLNDIAQERGQSLAQMALAWVLREQGEYGADTVTSALIGASSVEQLDN SLDSLNNLEFSDAELEAIDEISHDAGINIWAKATDSKTREN
Sequences:
>Translated_361_residues MAVMAYQPADNRYDDMIYRRVGNSGLKLPAISLGLWHNFGDDKPLSTQRSIIHRAFDRGVTHFDLANNYGPPAGSAETNF GRILREDLKSHRDELIISSKAGWDMWPGPYGFGGSRKYLVSSLDQSLTRLGLDYVDIFYHHRPDPDTPLEETMYALRDIV ASGKALYVGISSYGPELTAEAAEFMAEEGCPLLIHQPSYSIINRWVEEPGDDGENLLQSAANNGLGVIAFSPLAQGLLTD KYLDGIPEGSRASQGKSLSEGMLNVNNIDMVRKLNDIAQERGQSLAQMALAWVLREQGEYGADTVTSALIGASSVEQLDN SLDSLNNLEFSDAELEAIDEISHDAGINIWAKATDSKTREN >Mature_360_residues AVMAYQPADNRYDDMIYRRVGNSGLKLPAISLGLWHNFGDDKPLSTQRSIIHRAFDRGVTHFDLANNYGPPAGSAETNFG RILREDLKSHRDELIISSKAGWDMWPGPYGFGGSRKYLVSSLDQSLTRLGLDYVDIFYHHRPDPDTPLEETMYALRDIVA SGKALYVGISSYGPELTAEAAEFMAEEGCPLLIHQPSYSIINRWVEEPGDDGENLLQSAANNGLGVIAFSPLAQGLLTDK YLDGIPEGSRASQGKSLSEGMLNVNNIDMVRKLNDIAQERGQSLAQMALAWVLREQGEYGADTVTSALIGASSVEQLDNS LDSLNNLEFSDAELEAIDEISHDAGINIWAKATDSKTREN
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=335, Percent_Identity=33.4328358208955, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI4504825, Length=334, Percent_Identity=32.9341317365269, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI27436962, Length=333, Percent_Identity=32.7327327327327, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI27436964, Length=345, Percent_Identity=31.5942028985507, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI27436966, Length=333, Percent_Identity=32.4324324324324, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI27436971, Length=330, Percent_Identity=32.7272727272727, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI41327764, Length=238, Percent_Identity=31.0924369747899, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI223718702, Length=321, Percent_Identity=30.8411214953271, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI41152114, Length=249, Percent_Identity=31.3253012048193, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1789375, Length=356, Percent_Identity=58.1460674157303, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=33.125, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1788070, Length=342, Percent_Identity=28.0701754385965, Blast_Score=98, Evalue=9e-22, Organism=Escherichia coli, GI1789199, Length=357, Percent_Identity=28.0112044817927, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788081, Length=315, Percent_Identity=25.3968253968254, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=352, Percent_Identity=25.5681818181818, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6322615, Length=264, Percent_Identity=24.6212121212121, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=24.1610738255034, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322556, Length=322, Percent_Identity=24.5341614906832, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=262, Percent_Identity=24.4274809160305, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640980, Length=334, Percent_Identity=27.2455089820359, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI45549126, Length=334, Percent_Identity=27.2455089820359, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24646155, Length=332, Percent_Identity=26.8072289156627, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646159, Length=321, Percent_Identity=23.6760124610592, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39661; Mature: 39529
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMAYQPADNRYDDMIYRRVGNSGLKLPAISLGLWHNFGDDKPLSTQRSIIHRAFDRGV CCEEEECCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCC THFDLANNYGPPAGSAETNFGRILREDLKSHRDELIISSKAGWDMWPGPYGFGGSRKYLV CEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHH SSLDQSLTRLGLDYVDIFYHHRPDPDTPLEETMYALRDIVASGKALYVGISSYGPELTAE HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH AAEFMAEEGCPLLIHQPSYSIINRWVEEPGDDGENLLQSAANNGLGVIAFSPLAQGLLTD HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHH KYLDGIPEGSRASQGKSLSEGMLNVNNIDMVRKLNDIAQERGQSLAQMALAWVLREQGEY HHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GADTVTSALIGASSVEQLDNSLDSLNNLEFSDAELEAIDEISHDAGINIWAKATDSKTRE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC N C >Mature Secondary Structure AVMAYQPADNRYDDMIYRRVGNSGLKLPAISLGLWHNFGDDKPLSTQRSIIHRAFDRGV CEEEECCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCC THFDLANNYGPPAGSAETNFGRILREDLKSHRDELIISSKAGWDMWPGPYGFGGSRKYLV CEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHH SSLDQSLTRLGLDYVDIFYHHRPDPDTPLEETMYALRDIVASGKALYVGISSYGPELTAE HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH AAEFMAEEGCPLLIHQPSYSIINRWVEEPGDDGENLLQSAANNGLGVIAFSPLAQGLLTD HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHH KYLDGIPEGSRASQGKSLSEGMLNVNNIDMVRKLNDIAQERGQSLAQMALAWVLREQGEY HHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GADTVTSALIGASSVEQLDNSLDSLNNLEFSDAELEAIDEISHDAGINIWAKATDSKTRE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]