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The map label for this gene is 62390103

Identifier: 62390103

GI number: 62390103

Start: 1281738

End: 1282430

Strand: Direct

Name: 62390103

Synonym: cg1371

Alternate gene names: NA

Gene position: 1281738-1282430 (Clockwise)

Preceding gene: 62390102

Following gene: 62390104

Centisome position: 39.05

GC content: 49.78

Gene sequence:

>693_bases
ATGCGTTTAGTCATCGCCCGTTGCTCAGTTGATTATGTTGGCCGTTTGGAAGCTCATCTTCCGTCCGCCGATCGCCTTTT
GATGGTTAAGGCGGATGGTTCTGTATCCATCCATGCCGATGACCGTGCCTATAAGCCACTGAACTGGATGACACCTCCAT
GTTCTTTAGTTGAAACTCCCATCACTGATGAAGATGGTGAAGCAACAGGGGAAAGCCTGTGGGTGGTGGAAAACAAAAAG
GGCGAGCAGCTTCGAATTACTGTGGAAGAAATTCATTCGGAACAAAACTTCGATCTAGGCCAAGACCCAGGTTTGGTGAA
AGACGGAGTGGAAGATCATCTCCAAGAGCTTCTTGCAGAGCACATCACTACGTTGGGTGATGGGTACACATTGATTCGTC
GGGAGTATCCAACAGCTATTGGGCCTGTCGATATTTTGTGTCGCAACTCTGACGGCGAGACTGTCGCTGTGGAGATCAAG
CGTCGTGGTGGCATCGACGGCGTTGAGCAGTTGACCAGGTATTTGGAATTGCTCAACCGTGATGAATTGCTCAAGCCTGT
TCATGGAGTGTTTGCAGCCCAGGAGATTAAGCCTCAGGCAAAGACTCTCGCGGAGGATCGTGGCATCAAGTGCGTGACGT
TGGATTATCAAGCGCTTCGTGGCATTGAGTCCAATGAGCTGACATTGTTCTAA

Upstream 100 bases:

>100_bases
GGGCGGAGCATTCATTGAATCCACGTGATTTCAACCGCTTTCGAGCCAGCAAAGACACCCGCAAAAACCGCTAAGTAGAC
GTCATTGTTATGGTGGGTGC

Downstream 100 bases:

>100_bases
GAACATGGGCCGAAAAAATAGAAGAACCAATATTCAGCCAGCTAGGGACCTGCCGGTCGATGGTACCTCCTATTGGGGAA
CTCAAACTCAGGAGGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEEIHSEQNFDLGQDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF

Sequences:

>Translated_230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEEIHSEQNFDLGQDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
>Mature_230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEEIHSEQNFDLGQDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1215_CORGL (Q8NR49)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927151
- RefSeq:   NP_600440.1
- RefSeq:   YP_225505.1
- GeneID:   1019198
- GeneID:   3344411
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg1371
- KEGG:   cgl:NCgl1168
- HOGENOM:   HBG322466
- OMA:   VDYVGRL
- ProtClustDB:   PRK03298
- BioCyc:   CGLU196627:CG1371-MONOMER
- HAMAP:   MF_00722
- InterPro:   IPR002793

Pfam domain/function: PF01939 DUF91

EC number: NA

Molecular weight: Translated: 25616; Mature: 25616

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETP
CEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEECC
ITDEDGEATGESLWVVENKKGEQLRITVEEIHSEQNFDLGQDPGLVKDGVEDHLQELLAE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIKRRGGIDGVEQLTRYLELLNR
HHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCH
DELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC
>Mature Secondary Structure
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETP
CEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEECC
ITDEDGEATGESLWVVENKKGEQLRITVEEIHSEQNFDLGQDPGLVKDGVEDHLQELLAE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIKRRGGIDGVEQLTRYLELLNR
HHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCH
DELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626