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The map label for this gene is ywaC [H]

Identifier: 62390065

GI number: 62390065

Start: 1236451

End: 1237083

Strand: Direct

Name: ywaC [H]

Synonym: cg1330

Alternate gene names: 62390065

Gene position: 1236451-1237083 (Clockwise)

Preceding gene: 62390064

Following gene: 62390067

Centisome position: 37.67

GC content: 47.39

Gene sequence:

>633_bases
ATGTCAGAGAATTTGCCAGCGCCCGAGAATCTCCTGGACGCCGAGAGAATTCAGATGATCAAGAACTTCCGCAACGAATT
AACGGGGTTCATGCTCAACTACCAATTTGGCATTGATGAGATCCTGACCAAGATCAACATCCTGAAAACTGAATTCAGCC
AGCTGCACGAATACGCACCTATCGAGCACGTATCTTCACGATTGAAGACACCAGAAAGCATCGTCAAAAAGGTCATCCGA
AAAGGAGACGAGCTCTCCCTCGCAGCTATCAAAGACACAGTGTTTGATATCGCAGGCATTCGAATCGTCTGCAGTTTCCT
CAAAGATGCCTACGCAATCGCCGATATGCTGACCAACCAAAAAGACGTCACGGTCATCGAGGCCAAAGACTACATCGCTA
ACCCAAAGCCGAACGGCTACAAGAGTTTGCACCTTATCCTCCAAGTGCCTGTCTTCCTGTCTAACTCCGTGGAAAAGGTC
AATGTTGAAGTCCAGATCCGCACCATTGCCATGGACTTCTGGGCAAGCCTCGAGCACAAAATCTACTACAAATTTGAACA
AGAAGTTCCTCAGTCAATCCTTGATGAGCTCAGTGAAGATGGAAAGAATCCACGGGGAAGTGAAGTCACTTAA

Upstream 100 bases:

>100_bases
AACCAATGGCTGGGTACTGATGTGGTGATCAGTGCCCAGTTTCTTCTTTCTACTAGTGTCGGATAGAAGTACCCCCAGTC
CAGAATGAAGGTCACCACCA

Downstream 100 bases:

>100_bases
ACCTCCAGTTGAAACCACTGACAGCGGAGAGGCGAAGTTACCCTCTGCGATAACTTTCAACGAGATTTTTGGTCGAGACT
TCAGCGCTTGAAAGAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSENLPAPENLLDAERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKVIR
KGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEAKDYIANPKPNGYKSLHLILQVPVFLSNSVEKV
NVEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEDGKNPRGSEVT

Sequences:

>Translated_210_residues
MSENLPAPENLLDAERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKVIR
KGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEAKDYIANPKPNGYKSLHLILQVPVFLSNSVEKV
NVEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEDGKNPRGSEVT
>Mature_209_residues
SENLPAPENLLDAERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKVIRK
GDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEAKDYIANPKPNGYKSLHLILQVPVFLSNSVEKVN
VEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEDGKNPRGSEVT

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 23933; Mature: 23802

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENLPAPENLLDAERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCC
IEHVSSRLKTPESIVKKVIRKGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQ
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDVTVIEAKDYIANPKPNGYKSLHLILQVPVFLSNSVEKVNVEVQIRTIAMDFWASLEHK
CCEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHH
IYYKFEQEVPQSILDELSEDGKNPRGSEVT
HEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SENLPAPENLLDAERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCC
IEHVSSRLKTPESIVKKVIRKGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQ
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDVTVIEAKDYIANPKPNGYKSLHLILQVPVFLSNSVEKVNVEVQIRTIAMDFWASLEHK
CCEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHH
IYYKFEQEVPQSILDELSEDGKNPRGSEVT
HEEHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]