Click here to switch to the map view.

The map label for this gene is 62389980

Identifier: 62389980

GI number: 62389980

Start: 1140703

End: 1140963

Strand: Direct

Name: 62389980

Synonym: cg4004

Alternate gene names: NA

Gene position: 1140703-1140963 (Clockwise)

Preceding gene: 62389979

Following gene: 62389981

Centisome position: 34.75

GC content: 50.57

Gene sequence:

>261_bases
TTGAGTCCGTCTAACATAATCCGCATCGCAGCTGTTCTAATCCCCAATGATCAGGATCAGATTCTCTGCGTCCGCAAAGA
GGGAACTGAATTGTTCATGTTTCCCGGAGGCAAGCAGGAGTTGTGGGAGACTCCTGCACAGGCAGCCGCGAACTCGAGGA
AGAAGACCTCGATCTTTATGGGCGTTTTCAGGCACCGGCAGCAAACGAACCTGGCTTCTATGTGGACTGCCATGTGTTTA
GCACATTTGATGTGTTCTTGA

Upstream 100 bases:

>100_bases
CGTTTTGAAAATGTCATCGGCGGCCATCTGGTCGGCTTCGCTCGGCGCGACGAGATGAAGATTGCTTTTCGACGTGGTGA
TGGATCAGAAGGGCTGTCTT

Downstream 100 bases:

>100_bases
ACTACACACCGGATGTGTACGAAGAACTCGCTGAGGCGAAGTACTTCTCGCCTAAACCACGATCGAAGAAGCTCGCGCCA
CTAACTCGTGACGTATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSPSNIIRIAAVLIPNDQDQILCVRKEGTELFMFPGGKQELWETPAQAAANSRKKTSIFMGVFRHRQQTNLASMWTAMCL
AHLMCS

Sequences:

>Translated_86_residues
MSPSNIIRIAAVLIPNDQDQILCVRKEGTELFMFPGGKQELWETPAQAAANSRKKTSIFMGVFRHRQQTNLASMWTAMCL
AHLMCS
>Mature_85_residues
SPSNIIRIAAVLIPNDQDQILCVRKEGTELFMFPGGKQELWETPAQAAANSRKKTSIFMGVFRHRQQTNLASMWTAMCLA
HLMCS

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9668; Mature: 9537

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSNIIRIAAVLIPNDQDQILCVRKEGTELFMFPGGKQELWETPAQAAANSRKKTSIFM
CCCCCEEEEEEEEECCCCCCEEEEECCCCEEEEECCCCHHHHCCHHHHHCCCCCHHHHHH
GVFRHRQQTNLASMWTAMCLAHLMCS
HHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPSNIIRIAAVLIPNDQDQILCVRKEGTELFMFPGGKQELWETPAQAAANSRKKTSIFM
CCCCEEEEEEEEECCCCCCEEEEECCCCEEEEECCCCHHHHCCHHHHHCCCCCHHHHHH
GVFRHRQQTNLASMWTAMCLAHLMCS
HHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA