| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is engD [H]
Identifier: 62389918
GI number: 62389918
Start: 1085849
End: 1086934
Strand: Direct
Name: engD [H]
Synonym: cg1171
Alternate gene names: 62389918
Gene position: 1085849-1086934 (Clockwise)
Preceding gene: 62389912
Following gene: 62389919
Centisome position: 33.08
GC content: 55.71
Gene sequence:
>1086_bases GTGACCCTTACTCTTGGAATCGTCGGCCTGCCCAACGTTGGCAAGTCCACCCTGTTCAACGCCCTGACTCGCAATGACGT GCTCGCAGCGAACTACCCGTTCGCCACCATCGAGCCAAACGTGGGCCTTGTCGAGCTTCCAGACGCTCGCCTTGAACGCC TTTCTGAAATCTTCGGCTCTGAGCGCATCCTGCCAGCAACCGTGTCTTTCGTTGACATCGCCGGAATCGTTAAGGGAGCT TCCGAAGGCGAAGGAATGGGCAACGCTTTCCTTGCCAACATCCGCGAAGCAGACGCTATCTGTCAGGTTGTGCGCGCATT CGCTGACGAAAACGTCATTCACGTCGATGGTGAAGTTAACCCAGCAACCGATATCTCTGTGATCAACACCGAGCTGATCC TCGCCGACCTGCAGACCGTGGAAAAAGCACTCCCACGCCTCGAAAAGGATGCACGCAAAGACAAGGGACTTGGCGAAGTC GTAGATGAGACCAAAAAAGCCCTTGCGATCTTGAGCGATGACCGCACCTTGTTCTCTGCAGCAAAAGCTGGCGACATTGA TCTGGCCCTCCTGCGCGATCTCCACCTGATGACAGCAAAGCCTTTCCTCTACGTCTTCAACTCCGACGAAAAAGTGCTCA CCGACGACGCCAAGAAGGACGAACTCCGCGCACTAGTCGCGCCAGCAGACTGCGTATTCCTTGACGCACAAACTGAAACC GAACTTCTTGAACTCGAAGAAGACGAAGCAGCAGAACTCCTCGAAGCTGTAGGCCAAACGGAACCAGGCCTACACTCCCT CGCACGTGCAGGATTTGAAACCCTCGGACTACAGACCTACCTCACCGCGGGTCCTAAGGAATCACGCGCCTGGACCATCC ACAAGGGCGACACCGCTCCACAGGCAGCAGGCGTTATCCATTCTGACTTCGAACGCGGCTTCATCAAGGCTGAAATCGTC TCCTTCGAAGATCTTGACGCTGCTGGTTCCATGGCGGAAGCCAAGGCCCAGGGCAAAGTCCGCCAAGAAGGTAAGGACTA CGTGATGGTCGATGGCGACGTTGTGGAGTTCCGGTTTAACGTCTAG
Upstream 100 bases:
>100_bases AGCGAAATTTCACCTTTTTGGAGGCAGTCGACAATGCTCTGGGCACTGTTTTGTGCCTCCTGATTAGGTTCTTACCCAAC GATTGCTAGGATATGTGCCT
Downstream 100 bases:
>100_bases CGTTATTGACGCTCCTCGTTATACGCTGGTCTCGTGATCAGATCGTTCGCCGACCGCGACACCGAGTTGGTCTGGTTGCG TGAAGGTGCGAAACGCGTCG
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGSERILPATVSFVDIAGIVKGA SEGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVNPATDISVINTELILADLQTVEKALPRLEKDARKDKGLGEV VDETKKALAILSDDRTLFSAAKAGDIDLALLRDLHLMTAKPFLYVFNSDEKVLTDDAKKDELRALVAPADCVFLDAQTET ELLELEEDEAAELLEAVGQTEPGLHSLARAGFETLGLQTYLTAGPKESRAWTIHKGDTAPQAAGVIHSDFERGFIKAEIV SFEDLDAAGSMAEAKAQGKVRQEGKDYVMVDGDVVEFRFNV
Sequences:
>Translated_361_residues MTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGSERILPATVSFVDIAGIVKGA SEGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVNPATDISVINTELILADLQTVEKALPRLEKDARKDKGLGEV VDETKKALAILSDDRTLFSAAKAGDIDLALLRDLHLMTAKPFLYVFNSDEKVLTDDAKKDELRALVAPADCVFLDAQTET ELLELEEDEAAELLEAVGQTEPGLHSLARAGFETLGLQTYLTAGPKESRAWTIHKGDTAPQAAGVIHSDFERGFIKAEIV SFEDLDAAGSMAEAKAQGKVRQEGKDYVMVDGDVVEFRFNV >Mature_360_residues TLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGSERILPATVSFVDIAGIVKGAS EGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVNPATDISVINTELILADLQTVEKALPRLEKDARKDKGLGEVV DETKKALAILSDDRTLFSAAKAGDIDLALLRDLHLMTAKPFLYVFNSDEKVLTDDAKKDELRALVAPADCVFLDAQTETE LLELEEDEAAELLEAVGQTEPGLHSLARAGFETLGLQTYLTAGPKESRAWTIHKGDTAPQAAGVIHSDFERGFIKAEIVS FEDLDAAGSMAEAKAQGKVRQEGKDYVMVDGDVVEFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=373, Percent_Identity=40.7506702412869, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI58761502, Length=188, Percent_Identity=39.8936170212766, Blast_Score=134, Evalue=9e-32, Organism=Escherichia coli, GI1787454, Length=372, Percent_Identity=50.8064516129032, Blast_Score=348, Evalue=2e-97, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=38.5245901639344, Blast_Score=253, Evalue=7e-68, Organism=Saccharomyces cerevisiae, GI6319499, Length=373, Percent_Identity=39.4101876675603, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6321773, Length=391, Percent_Identity=34.2710997442455, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321649, Length=114, Percent_Identity=38.5964912280702, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640873, Length=372, Percent_Identity=41.6666666666667, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640877, Length=372, Percent_Identity=41.6666666666667, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640875, Length=372, Percent_Identity=41.6666666666667, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24640879, Length=330, Percent_Identity=39.6969696969697, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24585318, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 38955; Mature: 38824
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGS CEEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEECCCCCEEECCHHHHHHHHHHHCC ERILPATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVN CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PATDISVINTELILADLQTVEKALPRLEKDARKDKGLGEVVDETKKALAILSDDRTLFSA CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCHHHHH AKAGDIDLALLRDLHLMTAKPFLYVFNSDEKVLTDDAKKDELRALVAPADCVFLDAQTET CCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHEEECCCCEEEEECCCCC ELLELEEDEAAELLEAVGQTEPGLHSLARAGFETLGLQTYLTAGPKESRAWTIHKGDTAP HHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCEEEEECCCCCCCEEEEECCCCCC QAAGVIHSDFERGFIKAEIVSFEDLDAAGSMAEAKAQGKVRQEGKDYVMVDGDVVEFRFN HHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHCCCCEEEECCEEEEEEEC V C >Mature Secondary Structure TLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGS EEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEECCCCCEEECCHHHHHHHHHHHCC ERILPATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVN CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PATDISVINTELILADLQTVEKALPRLEKDARKDKGLGEVVDETKKALAILSDDRTLFSA CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCHHHHH AKAGDIDLALLRDLHLMTAKPFLYVFNSDEKVLTDDAKKDELRALVAPADCVFLDAQTET CCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHEEECCCCEEEEECCCCC ELLELEEDEAAELLEAVGQTEPGLHSLARAGFETLGLQTYLTAGPKESRAWTIHKGDTAP HHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCEEEEECCCCCCCEEEEECCCCCC QAAGVIHSDFERGFIKAEIVSFEDLDAAGSMAEAKAQGKVRQEGKDYVMVDGDVVEFRFN HHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHCCCCEEEECCEEEEEEEC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]