| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ssiG [H]
Identifier: 62389903
GI number: 62389903
Start: 1070118
End: 1071317
Strand: Direct
Name: ssiG [H]
Synonym: cg1153
Alternate gene names: 62389903
Gene position: 1070118-1071317 (Clockwise)
Preceding gene: 62389902
Following gene: 62389904
Centisome position: 32.6
GC content: 58.92
Gene sequence:
>1200_bases ATGAGCCAAGAAATTTTGAGCCATTTTGCACCCGCATTAGAGCGCATTCGAAGCGGCGCCGTCGAGCGCGAACAGCAGCG CGCCTTGCCAGTGGAAGAGATTAAAGAGCTGGTAGAGCTAGGTTTTACTGGGCTTCGAGTGCCCGAAGAACTAGGCGGTG CGGGCGCTTCCCTGGAAAGCGTAGTTGAGTTACTGATCGAGATCGCGGGCGCCGATTCCAATATCGCCCAAGCCCTGCGC GGACATTTTGCCTTCGTGGAACTACTCCTGGAAGCGCCGGAGAGCGAATTCCGCACCCATTGGCTGCGCGAAGTCGCCAC CGGAAGACTTGTGGGCAACGCCGAAAGTGAGAAACGCGGCGTTTACGGCGATCCGCAGACCTTCATCGATGAGGTGGAGA CTGAAAACGGACCGATTTTCGTGCTCAACGGCACTAAGTTTTATACCACCGGCACCTATTTTGCGGACTACACCTGGACC ACCGCGCTGCTGCGCAACCTCAACGGCCAAGAAACTTTGGTCAGTTTGCCGGTCGATCTGCACGCGCCGGGCGTGGATGT TGTTGATGATTGGAGCGGGTTTGGGCAAAAGCTCACCGCCTCTGGAACGACCACGTTTAAAGACCTGGAGGTGGATCCGC GGTGGATCATTCCACGCACTGATGCGCCCACGCTGGTGTGGACGTATCTGCAGCTGAGCCTGCTGACCGTGCTGGTTGGC AGTGCCGCAGCAGCTGTCGATGAGGTGGTTGCCCGCGCCCAATCCTCCACCAGAAATGCGTGGAACCCTGGCGTCGAGCG CCGCAGCGATCCGGCCGCAACCATAGCGATCGGCGACGCACGCAGCCGAGTCACCGTTATTCGTGGAGCGCTTCTCGACG CCACCCGCCACGTTTCCAACGCCGCCACGATCGTAACCCCCGAAGCCTTCAACGAGGCGGACGCTATTGTTGCAGCGCTC TGGCCCATCGTCTCCGGACAAGCTTTGGTGGTGACATCCAACGTTTTCGATGCGGTGGGTGCATCTGCAGTGCTTGGTGA GCATTCCATTGATCGCCACTGGCGCAATGTGCGTACCGTGTCCTCAAACAACCCGGTGTTCCTGGCCAAGAATGCAGTGG GGGAGTATGCCCTCAACGGCACTCCTGTGGGTACCAACATTGGTAAAGCACTGAGCCGTCCGGTGAGCCTAAGCAGCTAG
Upstream 100 bases:
>100_bases CACCTTTGGTGCTGAGCCAGGCCACCCAGGCCTTTGAGGTTGGCGCAGATGCCTTAAACGGCGGCCACGTGGCTGCCCAA TACACGATCGGATCCTTGTC
Downstream 100 bases:
>100_bases ACGTGTGATTTCGCTGGTTTTTAGATGGTTTTCAAGCCAGCGAGACCACATTAGTTTCACGCTGGTTGAAACCTTTGAGA TCAATATAGACCGTGTGGTC
Product: monoxygenase
Products: gamma-butyrobetaine; Acceptor; gamma-butyrobetainyl-CoA [C]
Alternate protein names: DBT sulfur dioxygenase [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSQEILSHFAPALERIRSGAVEREQQRALPVEEIKELVELGFTGLRVPEELGGAGASLESVVELLIEIAGADSNIAQALR GHFAFVELLLEAPESEFRTHWLREVATGRLVGNAESEKRGVYGDPQTFIDEVETENGPIFVLNGTKFYTTGTYFADYTWT TALLRNLNGQETLVSLPVDLHAPGVDVVDDWSGFGQKLTASGTTTFKDLEVDPRWIIPRTDAPTLVWTYLQLSLLTVLVG SAAAAVDEVVARAQSSTRNAWNPGVERRSDPAATIAIGDARSRVTVIRGALLDATRHVSNAATIVTPEAFNEADAIVAAL WPIVSGQALVVTSNVFDAVGASAVLGEHSIDRHWRNVRTVSSNNPVFLAKNAVGEYALNGTPVGTNIGKALSRPVSLSS
Sequences:
>Translated_399_residues MSQEILSHFAPALERIRSGAVEREQQRALPVEEIKELVELGFTGLRVPEELGGAGASLESVVELLIEIAGADSNIAQALR GHFAFVELLLEAPESEFRTHWLREVATGRLVGNAESEKRGVYGDPQTFIDEVETENGPIFVLNGTKFYTTGTYFADYTWT TALLRNLNGQETLVSLPVDLHAPGVDVVDDWSGFGQKLTASGTTTFKDLEVDPRWIIPRTDAPTLVWTYLQLSLLTVLVG SAAAAVDEVVARAQSSTRNAWNPGVERRSDPAATIAIGDARSRVTVIRGALLDATRHVSNAATIVTPEAFNEADAIVAAL WPIVSGQALVVTSNVFDAVGASAVLGEHSIDRHWRNVRTVSSNNPVFLAKNAVGEYALNGTPVGTNIGKALSRPVSLSS >Mature_398_residues SQEILSHFAPALERIRSGAVEREQQRALPVEEIKELVELGFTGLRVPEELGGAGASLESVVELLIEIAGADSNIAQALRG HFAFVELLLEAPESEFRTHWLREVATGRLVGNAESEKRGVYGDPQTFIDEVETENGPIFVLNGTKFYTTGTYFADYTWTT ALLRNLNGQETLVSLPVDLHAPGVDVVDDWSGFGQKLTASGTTTFKDLEVDPRWIIPRTDAPTLVWTYLQLSLLTVLVGS AAAAVDEVVARAQSSTRNAWNPGVERRSDPAATIAIGDARSRVTVIRGALLDATRHVSNAATIVTPEAFNEADAIVAALW PIVSGQALVVTSNVFDAVGASAVLGEHSIDRHWRNVRTVSSNNPVFLAKNAVGEYALNGTPVGTNIGKALSRPVSLSS
Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]
COG id: COG1960
COG function: function code I; Acyl-CoA dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: 1.3.99.- [C]
Molecular weight: Translated: 42893; Mature: 42761
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50030 UBA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEILSHFAPALERIRSGAVEREQQRALPVEEIKELVELGFTGLRVPEELGGAGASLES CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCHHH VVELLIEIAGADSNIAQALRGHFAFVELLLEAPESEFRTHWLREVATGRLVGNAESEKRG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCCCHHCCC VYGDPQTFIDEVETENGPIFVLNGTKFYTTGTYFADYTWTTALLRNLNGQETLVSLPVDL CCCCHHHHHHHHCCCCCCEEEEECCEEEECCCEEEHHHHHHHHHHCCCCCCEEEECCCCC HAPGVDVVDDWSGFGQKLTASGTTTFKDLEVDPRWIIPRTDAPTLVWTYLQLSLLTVLVG CCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH SAAAAVDEVVARAQSSTRNAWNPGVERRSDPAATIAIGDARSRVTVIRGALLDATRHVSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC AATIVTPEAFNEADAIVAALWPIVSGQALVVTSNVFDAVGASAVLGEHSIDRHWRNVRTV CEEEECCHHCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCHHHHHCCHHHHHHHHHHEEE SSNNPVFLAKNAVGEYALNGTPVGTNIGKALSRPVSLSS CCCCCEEEEECCCCCEECCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure SQEILSHFAPALERIRSGAVEREQQRALPVEEIKELVELGFTGLRVPEELGGAGASLES CHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCHHH VVELLIEIAGADSNIAQALRGHFAFVELLLEAPESEFRTHWLREVATGRLVGNAESEKRG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCCCHHCCC VYGDPQTFIDEVETENGPIFVLNGTKFYTTGTYFADYTWTTALLRNLNGQETLVSLPVDL CCCCHHHHHHHHCCCCCCEEEEECCEEEECCCEEEHHHHHHHHHHCCCCCCEEEECCCCC HAPGVDVVDDWSGFGQKLTASGTTTFKDLEVDPRWIIPRTDAPTLVWTYLQLSLLTVLVG CCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH SAAAAVDEVVARAQSSTRNAWNPGVERRSDPAATIAIGDARSRVTVIRGALLDATRHVSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC AATIVTPEAFNEADAIVAALWPIVSGQALVVTSNVFDAVGASAVLGEHSIDRHWRNVRTV CEEEECCHHCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCHHHHHCCHHHHHHHHHHEEE SSNNPVFLAKNAVGEYALNGTPVGTNIGKALSRPVSLSS CCCCCEEEEECCCCCEECCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: crotono-betaine; reduced acceptor; crotonobetainyl-CoA [C]
Specific reaction: reduced acceptor + crotono-betaine = Acceptor + gamma-butyrobetaine reduced acceptor + crotonobetainyl-CoA = Acceptor + gamma-butyrobetainyl-CoA [C]
General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961424; 7574582 [H]