Click here to switch to the map view.

The map label for this gene is tnp6c(ISCg6c)

Identifier: 62389794

GI number: 62389794

Start: 961626

End: 961847

Strand: Direct

Name: tnp6c(ISCg6c)

Synonym: cg1030

Alternate gene names: NA

Gene position: 961626-961847 (Clockwise)

Preceding gene: 62389791

Following gene: 62389795

Centisome position: 29.29

GC content: 52.25

Gene sequence:

>222_bases
ATGTGCAGAAAGTTGGGTGTGTCCAGAGCGTCGTATTACCGGTGGGCCAAGCCTGCGGGTCTGACTCCGACAGCCATAAG
GCATTTAGAACTCAGGGCTGAGGTTGCCCAGGAGTTTGAAAAAAGCAACCAGATGGCTGGCAGGGATCAGCTGACCACGT
TGCTCAACCAGCGTGGTGTCAAAGTTTCTACTGGGACTGTGGGATCAATTATGAACGAATGA

Upstream 100 bases:

>100_bases
TTTTGGGGAAAAGCCAGCGCCTTCTTTGGAAGCCGAAGCACCTGTAGAGGATCTCTCAGCGTTCATCGAGCAAGAGAAGG
CGTCGTTTCCCATTACATGG

Downstream 100 bases:

>100_bases
GGAGTGCGTGTCAGACGAATGCGGGCCTGGAAGAACACCACGGTCAGTGACCCTTTCTGCCCGGACCGAGCATATTAAAA
ATCATATGCTCGATAGCCAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MCRKLGVSRASYYRWAKPAGLTPTAIRHLELRAEVAQEFEKSNQMAGRDQLTTLLNQRGVKVSTGTVGSIMNE

Sequences:

>Translated_73_residues
MCRKLGVSRASYYRWAKPAGLTPTAIRHLELRAEVAQEFEKSNQMAGRDQLTTLLNQRGVKVSTGTVGSIMNE
>Mature_73_residues
MCRKLGVSRASYYRWAKPAGLTPTAIRHLELRAEVAQEFEKSNQMAGRDQLTTLLNQRGVKVSTGTVGSIMNE

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8123; Mature: 8123

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRKLGVSRASYYRWAKPAGLTPTAIRHLELRAEVAQEFEKSNQMAGRDQLTTLLNQRGV
CCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
KVSTGTVGSIMNE
CCCCCCHHHHCCC
>Mature Secondary Structure
MCRKLGVSRASYYRWAKPAGLTPTAIRHLELRAEVAQEFEKSNQMAGRDQLTTLLNQRGV
CCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
KVSTGTVGSIMNE
CCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA