| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yclO [H]
Identifier: 62389702
GI number: 62389702
Start: 855076
End: 856197
Strand: Direct
Name: yclO [H]
Synonym: cg0927
Alternate gene names: 62389702
Gene position: 855076-856197 (Clockwise)
Preceding gene: 62389701
Following gene: 62389703
Centisome position: 26.05
GC content: 53.65
Gene sequence:
>1122_bases GTGGCCGTGGATAAAGATATTGAAAACCGCACCTCAGACCTTTCTCGATGGGAAACTATGGAGGAATCAGCAACGGTCGA GGGACGCACCGATGTCGAACTAGCATCAGCGCCGAGCAAACGACGCACCTCAGGTGCATTCCAAACAGCGCGCGCCAAGC GCCGCTACTGGATCATCATGGCCGCGCTGCTGGTCACCGCGCTTGCCTTCACCTGGGGCCTCATTTGGTACAAGAACCCG ATGCCCGTTGGGCATCCGGCCTTCGCGCTGATTGCAGAACGACGCATGGAGTCGGTCTTTGTCATGCTGATTGTTGCGGT TTGCCAAGGCTTTGCGACGGTTGCGTTCCAGACCGTCACCAACAACCGCATTATCACGCCGTCGATCATGGGCTTTGAAT CTCTCTACACACTGATTCATACCTCCACAGTGTTCTTCTTCGGCGCAACTGCACTGCTGGCCACCAGAAATCTCGAAATG TTTGTCGGCCAGCTGGTGATCATGGTTCTTTTGACCTTGGTCCTCTACACCTGGCTGCTTTCCGGAAAACGCGGCGATAT GCACGCCATGCTGCTTGTCGGCATCATCATTGGTGGCGGACTCGGATCCATCTCCACCTTTATGCAGCGCATTCTGACCC CATCAGAATTCGATATTCTTTCCGCCCGACTTTTCGGATCAGTAAACAACGCGGAAACCGAATACTTCCCAATTGCTGTT CCACTAGTAGTAGTGGCGTCCGTCTTGTTGCTGCTAAGCTCTCGACGCCTCAACGTTGTAGGGCTTGGCAAAGATGCCGC AACCAACCTTGGAATTAATCACCGACGATCCTCCATTTACACACTGGTTCTCGTCTCTGTATTAATGGCAGTATCCACCG CACTTGTCGGACCGATGACATTCCTCGGATTCTTGGTCGCGACCTTGGCATATCAATTCGCCGACACTTACGACCACCGA TACATCCTTCCGATGTCCGCACTCATCGGATTCGTCGTACTCAGCGGCGCTTACTTTGTCATGAACCACGTGTTCCGCGC ACAAGGCGTCGTGTCCATCATTATTGAGATGGTCGGCGGTACCGTCTTCCTCATCGTCATCCTCAGAAAGGGCAGACTGT GA
Upstream 100 bases:
>100_bases TTGATCAGCCGAACCATCATCGCGCCTTTCGAAATTCCAGTTTCAGTAATCCTGGGCATCATCGGCGCAGTGGTCTTCGT GATCATGATTGTGAGGCAAC
Downstream 100 bases:
>100_bases TTACGTTAACTAATGTCCGCAAGGAATACTCCAGCGACGTTGCCATCGGCCCCGTCAACCTTGAGATCCCAGCCGGCGGC ATCACCGCGTTGGTCGGCCC
Product: ABC-type cobalamin/Fe3+-siderophores transport system, permease component
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MAVDKDIENRTSDLSRWETMEESATVEGRTDVELASAPSKRRTSGAFQTARAKRRYWIIMAALLVTALAFTWGLIWYKNP MPVGHPAFALIAERRMESVFVMLIVAVCQGFATVAFQTVTNNRIITPSIMGFESLYTLIHTSTVFFFGATALLATRNLEM FVGQLVIMVLLTLVLYTWLLSGKRGDMHAMLLVGIIIGGGLGSISTFMQRILTPSEFDILSARLFGSVNNAETEYFPIAV PLVVVASVLLLLSSRRLNVVGLGKDAATNLGINHRRSSIYTLVLVSVLMAVSTALVGPMTFLGFLVATLAYQFADTYDHR YILPMSALIGFVVLSGAYFVMNHVFRAQGVVSIIIEMVGGTVFLIVILRKGRL
Sequences:
>Translated_373_residues MAVDKDIENRTSDLSRWETMEESATVEGRTDVELASAPSKRRTSGAFQTARAKRRYWIIMAALLVTALAFTWGLIWYKNP MPVGHPAFALIAERRMESVFVMLIVAVCQGFATVAFQTVTNNRIITPSIMGFESLYTLIHTSTVFFFGATALLATRNLEM FVGQLVIMVLLTLVLYTWLLSGKRGDMHAMLLVGIIIGGGLGSISTFMQRILTPSEFDILSARLFGSVNNAETEYFPIAV PLVVVASVLLLLSSRRLNVVGLGKDAATNLGINHRRSSIYTLVLVSVLMAVSTALVGPMTFLGFLVATLAYQFADTYDHR YILPMSALIGFVVLSGAYFVMNHVFRAQGVVSIIIEMVGGTVFLIVILRKGRL >Mature_372_residues AVDKDIENRTSDLSRWETMEESATVEGRTDVELASAPSKRRTSGAFQTARAKRRYWIIMAALLVTALAFTWGLIWYKNPM PVGHPAFALIAERRMESVFVMLIVAVCQGFATVAFQTVTNNRIITPSIMGFESLYTLIHTSTVFFFGATALLATRNLEMF VGQLVIMVLLTLVLYTWLLSGKRGDMHAMLLVGIIIGGGLGSISTFMQRILTPSEFDILSARLFGSVNNAETEYFPIAVP LVVVASVLLLLSSRRLNVVGLGKDAATNLGINHRRSSIYTLVLVSVLMAVSTALVGPMTFLGFLVATLAYQFADTYDHRY ILPMSALIGFVVLSGAYFVMNHVFRAQGVVSIIIEMVGGTVFLIVILRKGRL
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG4605
COG function: function code P; ABC-type enterochelin transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=258, Percent_Identity=26.7441860465116, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790740, Length=252, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 40995; Mature: 40864
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDKDIENRTSDLSRWETMEESATVEGRTDVELASAPSKRRTSGAFQTARAKRRYWIIM CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH AALLVTALAFTWGLIWYKNPMPVGHPAFALIAERRMESVFVMLIVAVCQGFATVAFQTVT HHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEC NNRIITPSIMGFESLYTLIHTSTVFFFGATALLATRNLEMFVGQLVIMVLLTLVLYTWLL CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGKRGDMHAMLLVGIIIGGGLGSISTFMQRILTPSEFDILSARLFGSVNNAETEYFPIAV CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHHHH PLVVVASVLLLLSSRRLNVVGLGKDAATNLGINHRRSSIYTLVLVSVLMAVSTALVGPMT HHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGFLVATLAYQFADTYDHRYILPMSALIGFVVLSGAYFVMNHVFRAQGVVSIIIEMVGG HHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVFLIVILRKGRL HHHHHHHHHCCCC >Mature Secondary Structure AVDKDIENRTSDLSRWETMEESATVEGRTDVELASAPSKRRTSGAFQTARAKRRYWIIM CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH AALLVTALAFTWGLIWYKNPMPVGHPAFALIAERRMESVFVMLIVAVCQGFATVAFQTVT HHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEC NNRIITPSIMGFESLYTLIHTSTVFFFGATALLATRNLEMFVGQLVIMVLLTLVLYTWLL CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGKRGDMHAMLLVGIIIGGGLGSISTFMQRILTPSEFDILSARLFGSVNNAETEYFPIAV CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHHHH PLVVVASVLLLLSSRRLNVVGLGKDAATNLGINHRRSSIYTLVLVSVLMAVSTALVGPMT HHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGFLVATLAYQFADTYDHRYILPMSALIGFVVLSGAYFVMNHVFRAQGVVSIIIEMVGG HHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TVFLIVILRKGRL HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]