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The map label for this gene is ylbL [H]

Identifier: 62389672

GI number: 62389672

Start: 825663

End: 826715

Strand: Direct

Name: ylbL [H]

Synonym: cg0893

Alternate gene names: 62389672

Gene position: 825663-826715 (Clockwise)

Preceding gene: 62389670

Following gene: 62389675

Centisome position: 25.15

GC content: 55.18

Gene sequence:

>1053_bases
GTGAATCGCCGAATCAAGACTCTGACGTGGGGTGCTATCCCTTTGGTGCTGCTGGCATCGTTGGTAAGCATTGACCATAT
TCCGGGAACAAACATCAACTTGAGCGTGCCTTATGCCGCTGAAGGCCCAGGTCCTACGATCAATACGCTTGGTCAGGTCG
ACGGCGAGGATGTTGTGTCCATCAGTAGTGCTGATCTGGATGAGACCGAAGGTAACCTGAACATGACCACTGTGTCGGTT
CGTTCCGGCATGACATTGTCGCAGGTAATTTCCCGATGGCTGTTTACCGATGACACAATCGTTCCCATCGAGCAGGTTTT
CCCTCCCGGCCAATCCACCGAGGAAGTCGAAGAATCCAACCGCACCGCGTTCATCTCTTCGGAGTCTTCCGCAACGATCG
CCGCGATGAATTACCTCAACATTCCCGTCGAAGTTGAAGTTGCAGAAGTCCTCACCGACAGCGCCGCAACCGGAATTTTC
GAACCCGGCGACAAACTTCTCAGCATCGACGGCACCGCAATCTCCACTCCCGGCGATGCACAAACCATCGTGCGATCGAA
AGCTCCCGGCGATGAGATCACGATTTCCTACGAGAGAAACGATGCGGAATCTCAAGCAACCATCACTTTGAGGGAACACC
CGGATGATTCTTCGGTGGCGTTGTTGGGTATTTCAATGTTGTCGGTGCCTTCGAGCGCGATTGAGGTTGATTACAACTTG
GAAGATATCGGTGGTCCGAGCGCTGGCATGATGTTTTCGTTGGCGGTCGTCGATAAGCTTTCGCCTGGCGCGCTGAATGG
TGGCAAGTTTGTCGCTGGCACTGGCACCATCGCGGAGGACGGGTCGGTGGGCCCGATTGGCGGTATTGCGCACAAGGTGC
GCGCTGCGGAGGACGCGGGCGCGGAAGTGTTTTTGAGCCCTGCGGACAATTGCGCGGAGGCGATGAGTGCGAAGCCTCAG
GATATGACGATCTTGAAGGTGGATTCGTTGTCTCAGGCAATCGATCAGATGGCTGCCTACAACGAGGGCTCTGATTTCCA
GACGTGTGGCTAG

Upstream 100 bases:

>100_bases
GCCATTAGAGTTCATATTTACCAATCTACAAGGCAACTATTTCCTATTGCTACGATCCGAACAACGCTGTAAGCGAACAC
AGGTTGTAGGGTGGATATTC

Downstream 100 bases:

>100_bases
TTTTTAGACGCTGAGGTTTCTTCCGAGGACTCTTCAGTGTCCTTCGGTGTCGACAGCCCAAGTTCGTAGATGCGTTCCTC
CGGATCGATTTTGTCGGAGG

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVSISSADLDETEGNLNMTTVSV
RSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESNRTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIF
EPGDKLLSIDGTAISTPGDAQTIVRSKAPGDEITISYERNDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYNL
EDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDAGAEVFLSPADNCAEAMSAKPQ
DMTILKVDSLSQAIDQMAAYNEGSDFQTCG

Sequences:

>Translated_350_residues
MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVSISSADLDETEGNLNMTTVSV
RSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESNRTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIF
EPGDKLLSIDGTAISTPGDAQTIVRSKAPGDEITISYERNDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYNL
EDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDAGAEVFLSPADNCAEAMSAKPQ
DMTILKVDSLSQAIDQMAAYNEGSDFQTCG
>Mature_350_residues
MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVSISSADLDETEGNLNMTTVSV
RSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESNRTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIF
EPGDKLLSIDGTAISTPGDAQTIVRSKAPGDEITISYERNDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYNL
EDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDAGAEVFLSPADNCAEAMSAKPQ
DMTILKVDSLSQAIDQMAAYNEGSDFQTCG

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 36482; Mature: 36482

Theoretical pI: Translated: 3.83; Mature: 3.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVS
CCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCEEE
ISSADLDETEGNLNMTTVSVRSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESN
EECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCC
RTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIFEPGDKLLSIDGTAISTPGDA
CEEEEECCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCEEEECCCEECCCCCH
QTIVRSKAPGDEITISYERNDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYNL
HHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEHHHHCCCCCEEEECCH
EDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDAG
HHCCCCCHHHEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCC
AEVFLSPADNCAEAMSAKPQDMTILKVDSLSQAIDQMAAYNEGSDFQTCG
CEEEECCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVS
CCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCEEE
ISSADLDETEGNLNMTTVSVRSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESN
EECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCC
RTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIFEPGDKLLSIDGTAISTPGDA
CEEEEECCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCEEEECCCEECCCCCH
QTIVRSKAPGDEITISYERNDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYNL
HHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEHHHHCCCCCEEEECCH
EDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDAG
HHCCCCCHHHEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCC
AEVFLSPADNCAEAMSAKPQDMTILKVDSLSQAIDQMAAYNEGSDFQTCG
CEEEECCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]