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The map label for this gene is ycjP [H]

Identifier: 62389613

GI number: 62389613

Start: 744537

End: 745373

Strand: Reverse

Name: ycjP [H]

Synonym: cg0831

Alternate gene names: 62389613

Gene position: 745373-744537 (Counterclockwise)

Preceding gene: 62389614

Following gene: 62389612

Centisome position: 22.71

GC content: 56.87

Gene sequence:

>837_bases
ATGACTAAACGAACAAAAGGACTCATCCTCAACTACGCCGGAGTGGTGTTCATCCTCTTCTGGGGACTAGCTCCCTTCTA
CTGGATGGTTATCACCGCACTGCGCGATTCCAAGCACACCTTTGACACCACCCCATGGCCAACGCACGTCACCTTGGATA
ACTTCCGGGACGCACTGGCCACCGACAAAGGCAACAACTTCCTCGCAGCCATTGGCAACTCACTGGTCATCAGCGTCACC
ACAACAGCGATCGCTGTTCTCGTGGGAGTGTTCACCGCCTACGCTCTAGCCCGACTGGAATTCCCGGGCAAAGGCATTGT
CACCGGCATCATCTTGGCAGCCTCCATGTTCCCCGGCATCGCCCTGGTCACTCCGCTGTTCCAGCTCTTCGGTGACCTCA
ACTGGATCGGCACCTACCAAGCGCTGATTATCCCGAACATTTCCTTCGCGCTACCTCTGACGATCTACACGCTCGTATCC
TTCTTCAGGCAACTGCCCTGGGAACTCGAAGAATCAGCACGTGTCGACGGCGCCACACGTGGCCAAGCCTTCCGCATGAT
CCTGCTTCCTCTAGCAGCGCCCGCACTATTTACCACCGCGATCCTCGCATTCATTGCAACGTGGAACGAATTCATGCTGG
CCCGCCAACTATCCAACACCTCCACAGAGCCAGTGACCGTTGCGATCGCAAGGTTCACCGGACCAAGCTCCTTCGAATAC
CCCTACGCCTCTGTCATGGCAGCGGGAGCTTTGGTGACCATCCCACTGATCATCATGGTTCTCATCTTCCAACGCCGCAT
CGTCTCCGGACTCACCGCAGGTGGCGTGAAAGCCTAG

Upstream 100 bases:

>100_bases
GAATAAAGAAAAAGAAACTGGGCGGAACCAAGGATGAGAAACCCACCGCTAAGGATGCTGTTGTAAAGGCCGATTCTGCT
GTGAAGGAAGCCGCTAAGCC

Downstream 100 bases:

>100_bases
ACTAGATACTCATGAGTGCTGATAAATCCCAGGACCAATCCGAATCGCAACGCAAAGGGCTTCAACCCGAAGCGCTGCTT
GGATTCCTGGGATTTTTCTC

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTKRTKGLILNYAGVVFILFWGLAPFYWMVITALRDSKHTFDTTPWPTHVTLDNFRDALATDKGNNFLAAIGNSLVISVT
TTAIAVLVGVFTAYALARLEFPGKGIVTGIILAASMFPGIALVTPLFQLFGDLNWIGTYQALIIPNISFALPLTIYTLVS
FFRQLPWELEESARVDGATRGQAFRMILLPLAAPALFTTAILAFIATWNEFMLARQLSNTSTEPVTVAIARFTGPSSFEY
PYASVMAAGALVTIPLIIMVLIFQRRIVSGLTAGGVKA

Sequences:

>Translated_278_residues
MTKRTKGLILNYAGVVFILFWGLAPFYWMVITALRDSKHTFDTTPWPTHVTLDNFRDALATDKGNNFLAAIGNSLVISVT
TTAIAVLVGVFTAYALARLEFPGKGIVTGIILAASMFPGIALVTPLFQLFGDLNWIGTYQALIIPNISFALPLTIYTLVS
FFRQLPWELEESARVDGATRGQAFRMILLPLAAPALFTTAILAFIATWNEFMLARQLSNTSTEPVTVAIARFTGPSSFEY
PYASVMAAGALVTIPLIIMVLIFQRRIVSGLTAGGVKA
>Mature_277_residues
TKRTKGLILNYAGVVFILFWGLAPFYWMVITALRDSKHTFDTTPWPTHVTLDNFRDALATDKGNNFLAAIGNSLVISVTT
TAIAVLVGVFTAYALARLEFPGKGIVTGIILAASMFPGIALVTPLFQLFGDLNWIGTYQALIIPNISFALPLTIYTLVSF
FRQLPWELEESARVDGATRGQAFRMILLPLAAPALFTTAILAFIATWNEFMLARQLSNTSTEPVTVAIARFTGPSSFEYP
YASVMAAGALVTIPLIIMVLIFQRRIVSGLTAGGVKA

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=35.2313167259786, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1790464, Length=249, Percent_Identity=30.9236947791165, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=27.8195488721804, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787368, Length=161, Percent_Identity=29.8136645962733, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30247; Mature: 30116

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTKGLILNYAGVVFILFWGLAPFYWMVITALRDSKHTFDTTPWPTHVTLDNFRDALA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH
TDKGNNFLAAIGNSLVISVTTTAIAVLVGVFTAYALARLEFPGKGIVTGIILAASMFPGI
CCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH
ALVTPLFQLFGDLNWIGTYQALIIPNISFALPLTIYTLVSFFRQLPWELEESARVDGATR
HHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
GQAFRMILLPLAAPALFTTAILAFIATWNEFMLARQLSNTSTEPVTVAIARFTGPSSFEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PYASVMAAGALVTIPLIIMVLIFQRRIVSGLTAGGVKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKRTKGLILNYAGVVFILFWGLAPFYWMVITALRDSKHTFDTTPWPTHVTLDNFRDALA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH
TDKGNNFLAAIGNSLVISVTTTAIAVLVGVFTAYALARLEFPGKGIVTGIILAASMFPGI
CCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH
ALVTPLFQLFGDLNWIGTYQALIIPNISFALPLTIYTLVSFFRQLPWELEESARVDGATR
HHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
GQAFRMILLPLAAPALFTTAILAFIATWNEFMLARQLSNTSTEPVTVAIARFTGPSSFEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PYASVMAAGALVTIPLIIMVLIFQRRIVSGLTAGGVKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]