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The map label for this gene is tnp5a(ISCg5a) [C]

Identifier: 62389607

GI number: 62389607

Start: 740143

End: 741645

Strand: Reverse

Name: tnp5a(ISCg5a) [C]

Synonym: cg0824

Alternate gene names: 62389607

Gene position: 741645-740143 (Counterclockwise)

Preceding gene: 62389608

Following gene: 62389606

Centisome position: 22.59

GC content: 53.23

Gene sequence:

>1503_bases
GTGCACACCCCAGACCTACACCACAGGCATAGTCCTAGGCTGCTCACAATTGACATCATGCCTAAACCCCTACCCCCAGA
AACCCGACGCAAGATCATCGATTTCGATCCGTTCGCACCGAACAGCCCCTCGATCGAAGAGTTCTGCAGTCGGCTAAAAA
TATCGCGGCGCAGCTTCTACAACATCCGCAACCGATACCAACAAGACGCCAACGCAGCACTGCATCCACACTCCAGCGCC
CCAATCACCGCCCGGCGAACGTACGATGAATCCATCACCAGCACCTTGCTGTCCATCCGCGCACGCCTGAAAGCCCAAGG
ATGGGAGTACGGCCCGATCTCTATTCGATTCGAAGGCATCTCCACCGGGGAACTGACTGCACCGATTCCATCTGTTTCAA
CCATTGCTCGTTTGTTACGCGCCGCAGGAGCTGTTGAAAGTAACCCTAAGAAGCGACCGAAGTCGTCGGTGGTGAGGTTT
CAACGAGGTCAAGCCATGGAAATGTGGCAAATAGATGGTTTCATCTACACACTGCACGATACTGATCTGACTCGGGTAAC
GATCTATCAAATCCTTGATGATGCCACTCGGTTTGATGTCGGAACCTGTGTCTTCCCCGCGAATGAAAACTCAGTCGATG
CCCGAACAGCGCTAGAACAAGCGATTGCTCATTTCGGTGCCCCGCATGAATTACTCAGTGATAACGGCTCAGCGTTTAAC
CGGATGCGGCAAGGATACGTCGGAAGCTTGGAAAGCTATCTCGCGACGGTGGGGTGTTTAAGCATTACCGGCAAGCCTGG
GCATCCTCAAACCCAAGGTAAAAACGAACGCAGCCACCGCACACTATTTCGTTTCCTTCAAGCTCATCAACCACACACAC
TTGAGGAATGTGCGCACTATATTGAACAGTTCCGCGATCATTACAACAATCGTCGCCCGCATCAGGGGTTGCCGAATAAT
CTCACCCCGGCCGCGGCCTGGGAGATTGTGGGCTGTGTGGAACAACAACCCCCGATTGATCCCGTCGTGCTTCAACAGCA
AGCCGATCACTATGCCCGTCGTCGAATTGAGAAGCAATCAGATGTCCCGCTTGTTCGGCAGGAGGAATCTGTTCCGGTGT
CTAAGATGCAGCAGACCGAGCAACGTCGACGGGTACGTCGTTTTGGTAAAAAGCCGGTGGATCCTGATGTGTTTACGTTT
GCTGGGAATAATCAGAAGGTGGTGTTCCAGGGGATGCGTATTTCTGTTCCTCGTACGATGAGGGACAGGGAGTTTTATCG
GACGGTGACGGCAACTGAGCTTGGTTTCTGGGATGCGATAACCGGGGAGCTTGAGTTGTCGATTCCGTTGCCGGTTGTGG
CGATTGCCCGGGGTAAGTCGTATATCAATTCTTACAACATTCGTGGGGTGTGGATGCAACACCCGACACCGTTGTGGCAA
CGCAAACGTGATGAGGCTGAGAAGCGATTCAAGTCGATAGATCCGGGGGATCTTCTGCGCTAG

Upstream 100 bases:

>100_bases
GTTTTCAACTGTTTTGTGTCAGAGGGTTGTGCACACTCAGTGTCATGACCTTATGCACACTTAATGCCATGACCTTGTGC
ATGCATAGTGTCATGACCTT

Downstream 100 bases:

>100_bases
AAACTTGTCCCGAGGGGCTGGGTTGGTGTGCACACTGCTGTGGCTTTGTGTGTGCACAACCTAGTGGGATAGGGCGTGCA
CAAGGATATGACATTGGGTG

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase; Integrase Catalytic Domain-Containing Protein; Helix-Turn-Helix Fis-Type; Transposase ; Transposase Of; Integrase; Integrase Core Domain Protein; ISCc3 Transposase OrfB; Transposase For ISMyma; Helix-Turn-Helix Domain Containing Protein Fis-Type; Transposase Of ISGbem_A; ISmav2-Like Transposase; Partial Transposase Protein; ISHne2 Transposase; Transposase OrfB; Transposase Integrase; Integrase Family Protein

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MHTPDLHHRHSPRLLTIDIMPKPLPPETRRKIIDFDPFAPNSPSIEEFCSRLKISRRSFYNIRNRYQQDANAALHPHSSA
PITARRTYDESITSTLLSIRARLKAQGWEYGPISIRFEGISTGELTAPIPSVSTIARLLRAAGAVESNPKKRPKSSVVRF
QRGQAMEMWQIDGFIYTLHDTDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTALEQAIAHFGAPHELLSDNGSAFN
RMRQGYVGSLESYLATVGCLSITGKPGHPQTQGKNERSHRTLFRFLQAHQPHTLEECAHYIEQFRDHYNNRRPHQGLPNN
LTPAAAWEIVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVPLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTF
AGNNQKVVFQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELSIPLPVVAIARGKSYINSYNIRGVWMQHPTPLWQ
RKRDEAEKRFKSIDPGDLLR

Sequences:

>Translated_500_residues
MHTPDLHHRHSPRLLTIDIMPKPLPPETRRKIIDFDPFAPNSPSIEEFCSRLKISRRSFYNIRNRYQQDANAALHPHSSA
PITARRTYDESITSTLLSIRARLKAQGWEYGPISIRFEGISTGELTAPIPSVSTIARLLRAAGAVESNPKKRPKSSVVRF
QRGQAMEMWQIDGFIYTLHDTDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTALEQAIAHFGAPHELLSDNGSAFN
RMRQGYVGSLESYLATVGCLSITGKPGHPQTQGKNERSHRTLFRFLQAHQPHTLEECAHYIEQFRDHYNNRRPHQGLPNN
LTPAAAWEIVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVPLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTF
AGNNQKVVFQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELSIPLPVVAIARGKSYINSYNIRGVWMQHPTPLWQ
RKRDEAEKRFKSIDPGDLLR
>Mature_500_residues
MHTPDLHHRHSPRLLTIDIMPKPLPPETRRKIIDFDPFAPNSPSIEEFCSRLKISRRSFYNIRNRYQQDANAALHPHSSA
PITARRTYDESITSTLLSIRARLKAQGWEYGPISIRFEGISTGELTAPIPSVSTIARLLRAAGAVESNPKKRPKSSVVRF
QRGQAMEMWQIDGFIYTLHDTDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTALEQAIAHFGAPHELLSDNGSAFN
RMRQGYVGSLESYLATVGCLSITGKPGHPQTQGKNERSHRTLFRFLQAHQPHTLEECAHYIEQFRDHYNNRRPHQGLPNN
LTPAAAWEIVGCVEQQPPIDPVVLQQQADHYARRRIEKQSDVPLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTF
AGNNQKVVFQGMRISVPRTMRDREFYRTVTATELGFWDAITGELELSIPLPVVAIARGKSYINSYNIRGVWMQHPTPLWQ
RKRDEAEKRFKSIDPGDLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786462, Length=287, Percent_Identity=26.1324041811847, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57185; Mature: 57185

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTPDLHHRHSPRLLTIDIMPKPLPPETRRKIIDFDPFAPNSPSIEEFCSRLKISRRSFY
CCCCCCCCCCCCCEEEEEECCCCCCCHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NIRNRYQQDANAALHPHSSAPITARRTYDESITSTLLSIRARLKAQGWEYGPISIRFEGI
HHHHHHHHCCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
STGELTAPIPSVSTIARLLRAAGAVESNPKKRPKSSVVRFQRGQAMEMWQIDGFIYTLHD
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCEEEEEEC
TDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTALEQAIAHFGAPHELLSDNGSAFN
CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHH
RMRQGYVGSLESYLATVGCLSITGKPGHPQTQGKNERSHRTLFRFLQAHQPHTLEECAHY
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
IEQFRDHYNNRRPHQGLPNNLTPAAAWEIVGCVEQQPPIDPVVLQQQADHYARRRIEKQS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DVPLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTFAGNNQKVVFQGMRISVPRTM
CCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECEEEECCCHH
RDREFYRTVTATELGFWDAITGELELSIPLPVVAIARGKSYINSYNIRGVWMQHPTPLWQ
HHHHHHHHHHHHHCCCHHEECCCEEEECCCCEEEECCCHHHHHCCCCEEEEECCCCHHHH
RKRDEAEKRFKSIDPGDLLR
HHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MHTPDLHHRHSPRLLTIDIMPKPLPPETRRKIIDFDPFAPNSPSIEEFCSRLKISRRSFY
CCCCCCCCCCCCCEEEEEECCCCCCCHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NIRNRYQQDANAALHPHSSAPITARRTYDESITSTLLSIRARLKAQGWEYGPISIRFEGI
HHHHHHHHCCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
STGELTAPIPSVSTIARLLRAAGAVESNPKKRPKSSVVRFQRGQAMEMWQIDGFIYTLHD
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCEEEEEEC
TDLTRVTIYQILDDATRFDVGTCVFPANENSVDARTALEQAIAHFGAPHELLSDNGSAFN
CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHH
RMRQGYVGSLESYLATVGCLSITGKPGHPQTQGKNERSHRTLFRFLQAHQPHTLEECAHY
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
IEQFRDHYNNRRPHQGLPNNLTPAAAWEIVGCVEQQPPIDPVVLQQQADHYARRRIEKQS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DVPLVRQEESVPVSKMQQTEQRRRVRRFGKKPVDPDVFTFAGNNQKVVFQGMRISVPRTM
CCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECEEEECCCHH
RDREFYRTVTATELGFWDAITGELELSIPLPVVAIARGKSYINSYNIRGVWMQHPTPLWQ
HHHHHHHHHHHHHCCCHHEECCCEEEECCCCEEEECCCHHHHHCCCCEEEEECCCCHHHH
RKRDEAEKRFKSIDPGDLLR
HHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA