Click here to switch to the map view.

The map label for this gene is ydbT [H]

Identifier: 62389531

GI number: 62389531

Start: 656583

End: 657998

Strand: Direct

Name: ydbT [H]

Synonym: cg0740

Alternate gene names: 62389531

Gene position: 656583-657998 (Clockwise)

Preceding gene: 62389530

Following gene: 62389532

Centisome position: 20.0

GC content: 56.14

Gene sequence:

>1416_bases
ATGAGCAGCCTTGAAGGGTTTCGAAAAGTCCACCGCGCCACCCCATTCCTTCGCATCTGGACCATCATCGTCGCAGTTCT
CGCGGCATTCGCATTCAATTCCGGCGCATCCGTTTTAAGTTTCATCTGGGGTGTCGTCACCGGCGAATACGGATTCGCAG
TGCTGCCGATTCTATTGACCGTCGGTGGCGCCGTCATTGTGGTGGCACTGGCCTGGATTATCACCGGAATTTGGTGGAAA
GCCGTCGGATTCCGCATCACCAATGAAGAGGTGCAGCTGCAACGCGGAGTGATCAGCAAAGACCTCCGCACCGCCCGATT
TGACCGTATCCAAGCCGTTGACCTGGTGGAATCATTCATCGCCCGTATCTTCCGACTGGCAGAAGTCCGCATCGAAACCG
CCGGCGGCAGCGACTCCGCCATCAGCATTGGCTTTTTAAGAAAAAGCGAGGCCGAGGCCCTAAAAAGGGAGCTTCTCGAC
GCCTCCCAGCACTCAGTCGCCACCACCCCAGCCGGAGTTCCGGCTGAGCCTGGGGTAGGGGAGACCGTTGTAGTTGAGAG
CGCGGGCGATGTTCTGGTTCCACAAATCCCCGTGCAACGCACCCTCGCCAGCACCGCCTTATCACTAGCAACCATCATCA
CCGCGATCGGTATTGTGATTTTGCTCTTCGTTCCTTTCGGAGTGAGCATTGCCGTGCCGTTCTTTGTAGGCATGGTGCCA
GCGGTCTGGAACTTGATCGATAAGTCGTGGCAATTCACCGCAACACAGCGCAACGATGTCCTGCATGTCAGCTATGGACT
TGCCAACCGCCGCAAACAATCAATCCCACTGGGACGCATCCACGCAGTGAAACTAAAACAGCCATTGCTGTGGCGACTGG
TTGGCTGGTGGACCGTGACCGTGACTGTAGTTGGCTACGGCGACACCACCCAAGGCGGAACCTCCAAAATCTTGCCCGTG
GGTTCCAAAGAACTCGCACTAAAAGTCCTTGAAGCGGTGGGGCCACTAAACAGCGCCGACATCGCCGAATCTGCAGACCC
ATCACATATGAGCAGACCCCAGTACACACCACCAGTTGCTGCACGCCTGCTCACACCAGTCGATCGGACCCGCCAAGGCG
TCACGTTGATTGGTGTGGCTGGTGCCCCTGGTGCGGTGGTCGTGCATGAAGGCAGATTCATGCCACGTATGTCTGTGATT
GATACCTCCCACATCCAAGAACTCACCCTTAAACACGGGCCGATCCAAAGAATACTGGGACTCTCCACCGTTGTGTTTAA
CCTGGTCCAAGGGCCAGTGGGAATGGCCGCATCGGATCTCAGTGCAGCTGATGGAAAAGAACTTCTCAACATTCTCCGCA
ACAGAAAACTACCCGCACTGGAATCAGCTCCGCTGGGACAAAACAGCCTGGACTAA

Upstream 100 bases:

>100_bases
CGGCGTCCTCTGACTCCACCATTCAAGGCCTGCCTGTCGCGGAAGCCGATGCCTTACGTGAGCGACTGGCTATTAAGGCC
CGGGAGAGGATGAGCGGACT

Downstream 100 bases:

>100_bases
GGTGTAATCATGCACATCTCAGATCTTCCCGATAGGTCCCAGGACTACCTGAAGACAATCTGGGACATCACAGAACTCCT
TGATGATCAACCAGCAGCAC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSSLEGFRKVHRATPFLRIWTIIVAVLAAFAFNSGASVLSFIWGVVTGEYGFAVLPILLTVGGAVIVVALAWIITGIWWK
AVGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFIARIFRLAEVRIETAGGSDSAISIGFLRKSEAEALKRELLD
ASQHSVATTPAGVPAEPGVGETVVVESAGDVLVPQIPVQRTLASTALSLATIITAIGIVILLFVPFGVSIAVPFFVGMVP
AVWNLIDKSWQFTATQRNDVLHVSYGLANRRKQSIPLGRIHAVKLKQPLLWRLVGWWTVTVTVVGYGDTTQGGTSKILPV
GSKELALKVLEAVGPLNSADIAESADPSHMSRPQYTPPVAARLLTPVDRTRQGVTLIGVAGAPGAVVVHEGRFMPRMSVI
DTSHIQELTLKHGPIQRILGLSTVVFNLVQGPVGMAASDLSAADGKELLNILRNRKLPALESAPLGQNSLD

Sequences:

>Translated_471_residues
MSSLEGFRKVHRATPFLRIWTIIVAVLAAFAFNSGASVLSFIWGVVTGEYGFAVLPILLTVGGAVIVVALAWIITGIWWK
AVGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFIARIFRLAEVRIETAGGSDSAISIGFLRKSEAEALKRELLD
ASQHSVATTPAGVPAEPGVGETVVVESAGDVLVPQIPVQRTLASTALSLATIITAIGIVILLFVPFGVSIAVPFFVGMVP
AVWNLIDKSWQFTATQRNDVLHVSYGLANRRKQSIPLGRIHAVKLKQPLLWRLVGWWTVTVTVVGYGDTTQGGTSKILPV
GSKELALKVLEAVGPLNSADIAESADPSHMSRPQYTPPVAARLLTPVDRTRQGVTLIGVAGAPGAVVVHEGRFMPRMSVI
DTSHIQELTLKHGPIQRILGLSTVVFNLVQGPVGMAASDLSAADGKELLNILRNRKLPALESAPLGQNSLD
>Mature_470_residues
SSLEGFRKVHRATPFLRIWTIIVAVLAAFAFNSGASVLSFIWGVVTGEYGFAVLPILLTVGGAVIVVALAWIITGIWWKA
VGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFIARIFRLAEVRIETAGGSDSAISIGFLRKSEAEALKRELLDA
SQHSVATTPAGVPAEPGVGETVVVESAGDVLVPQIPVQRTLASTALSLATIITAIGIVILLFVPFGVSIAVPFFVGMVPA
VWNLIDKSWQFTATQRNDVLHVSYGLANRRKQSIPLGRIHAVKLKQPLLWRLVGWWTVTVTVVGYGDTTQGGTSKILPVG
SKELALKVLEAVGPLNSADIAESADPSHMSRPQYTPPVAARLLTPVDRTRQGVTLIGVAGAPGAVVVHEGRFMPRMSVID
TSHIQELTLKHGPIQRILGLSTVVFNLVQGPVGMAASDLSAADGKELLNILRNRKLPALESAPLGQNSLD

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 50489; Mature: 50357

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLEGFRKVHRATPFLRIWTIIVAVLAAFAFNSGASVLSFIWGVVTGEYGFAVLPILLT
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VGGAVIVVALAWIITGIWWKAVGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFI
HHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIFRLAEVRIETAGGSDSAISIGFLRKSEAEALKRELLDASQHSVATTPAGVPAEPGVG
HHHHHHHHHEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ETVVVESAGDVLVPQIPVQRTLASTALSLATIITAIGIVILLFVPFGVSIAVPFFVGMVP
CEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWNLIDKSWQFTATQRNDVLHVSYGLANRRKQSIPLGRIHAVKLKQPLLWRLVGWWTVT
HHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCEEEEHHCCHHHHHHHHHEEEE
VTVVGYGDTTQGGTSKILPVGSKELALKVLEAVGPLNSADIAESADPSHMSRPQYTPPVA
EEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ARLLTPVDRTRQGVTLIGVAGAPGAVVVHEGRFMPRMSVIDTSHIQELTLKHGPIQRILG
HHHHCCHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LSTVVFNLVQGPVGMAASDLSAADGKELLNILRNRKLPALESAPLGQNSLD
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSLEGFRKVHRATPFLRIWTIIVAVLAAFAFNSGASVLSFIWGVVTGEYGFAVLPILLT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VGGAVIVVALAWIITGIWWKAVGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFI
HHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIFRLAEVRIETAGGSDSAISIGFLRKSEAEALKRELLDASQHSVATTPAGVPAEPGVG
HHHHHHHHHEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ETVVVESAGDVLVPQIPVQRTLASTALSLATIITAIGIVILLFVPFGVSIAVPFFVGMVP
CEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWNLIDKSWQFTATQRNDVLHVSYGLANRRKQSIPLGRIHAVKLKQPLLWRLVGWWTVT
HHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCEEEEHHCCHHHHHHHHHEEEE
VTVVGYGDTTQGGTSKILPVGSKELALKVLEAVGPLNSADIAESADPSHMSRPQYTPPVA
EEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ARLLTPVDRTRQGVTLIGVAGAPGAVVVHEGRFMPRMSVIDTSHIQELTLKHGPIQRILG
HHHHCCHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LSTVVFNLVQGPVGMAASDLSAADGKELLNILRNRKLPALESAPLGQNSLD
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]