Click here to switch to the map view.

The map label for this gene is 62389461

Identifier: 62389461

GI number: 62389461

Start: 582685

End: 584232

Strand: Direct

Name: 62389461

Synonym: cg0662

Alternate gene names: NA

Gene position: 582685-584232 (Clockwise)

Preceding gene: 62389460

Following gene: 62389462

Centisome position: 17.75

GC content: 52.97

Gene sequence:

>1548_bases
ATGAGCGGATTAGTTGACCCGGATAGTACTTTTTTAAAGACCATCGGAAAACTGAGCAACAGCTTGTCCATTGGTCGTGG
AGTAGATCAAAAAGAGGTAATCCCCAAAGGCTGGAACGCCCATTGGGAGGCAATTACAAAGCTTAAGAGAAGCTTTGACG
CGATTCCTGCTGGGGAGCGGGTGCGTTTAGCTAAGAAAACCTCCAACCTGTTCCGTGGACGCTCCGATGCAGGTCACGGC
CTAGATGTGGCAGCGCTTGGGGGAGTGATTGCCATTGATCCGGTCAATGCCACCGCCGATGTACAGGGCATGTGCACGTA
TGAAGACCTGGTAGATGCCACTTTAAGTTATGGTCTGATGCCGTTGGTTGTGCCTCAACTGAAAACCATCACGCTTGGTG
GCGCAGTGACCGGAATGGGCGTGGAATCCACATCCTTCCGCAACGGTTTGCCACACGAATCAGTGCTGGAGATGGATATT
TTTACCGGCACTGGTGAGATCGTGACTTGCTCGCCCACAGAAAATGTCGACCTTTACAGAGGTTTTCCCAACTCTTATGG
TTCGCTGGGATACGCGGTGCGGCTAAAAATTGAGCTGGAACCAGTGCAAGATTACGTCCAGCTGCGCCACGTGCGCTTCA
ACGATTTAGAGTCTTTGACCAAAGCGATTGAGGAAGTCGCGTCTTCTCTGGAGTTTGATAACCAACCCGTCGATTACCTT
GACGGCGTGGTGTTTTCACCCACGGAAGCCTACTTAGTTCTTGGCACGCAAACCTCACAACCTGGCCCCACCAGCGATTA
CACCAGGGATTTAAGCTACTACCGCTCCCTGCAACACCCAGAGGGCATCACCTATGACCGCCTGACAATCCGCGATTACA
TCTGGCGCTGGGACACCGACTGGTTCTGGTGTTCACGCGCATTCGGCACCCAAAACCCCGTGGTGCGCAAACTCTGGCCC
AGGGATCTGCTGCGCTCGAGTTTCTATTGGAAGATCATCGGCTGGGATCGAAAATACTCCATCGCTGATCGCCTGGAAGA
GCGCAAAGGCCGCCCGGCTAGGGAACGGGTGGTCCAAGACGTGGAAGTTACGATTGATAAACTGCCAGAATTTTTGAAAT
GGTTCTTTGAAAGCAGCGACATCGAGCCGCTGTGGCTGTGCCCGATCAAGCTTCGGGAGGTACCAGGTAGTTCGGTTGGT
GCTGGAGAAATTTTGAGCTCCGCTGAAGCAATCGACTCCGGTGCTGCTGAACACCCTTGGCCGCTGTATCCCTTGAAGAA
GGACGTGCTGTGGGTCAACATCGGATTCTGGTCCTCAGTGCCGGTTGATCTGATGGGCTCCGATGCACCAGAGGGAGCAT
TTAACAGAGAAATCGAACGCGTCATGGCAGAGCTAGGCGGACATAAATCGCTGTACTCCGAAGCGTTCTACACCAGGGAA
GACTTTGAAAAACTTTATGGCGGAACCATCCCGGCGCTGCTAAAAAAGCAGTGGGATCCCCACAGCCGATTCCCCGGTTT
GTATGAAAAGACAGTAAAAGGCGCCTAG

Upstream 100 bases:

>100_bases
GGTCGTGCCGTGGAGCGTGCTGCGATTGTTGCCGCAGGGAAGTGAATTAGCAAAAGAGACAGCGCTCGCGCCCACCTATT
AAGGAGTATGGTGGCCTTAC

Downstream 100 bases:

>100_bases
GATCGCTCACTGTAGGTAGAGGCTTGTGGTCACTACTTGTGGCCACATTTTAAAAAAATGCACAAGAAGAGAAAGCAAAG
CATTATGAGTAACGCCGTAG

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: FAD Linked Oxidase Domain Protein; FAD Linked Oxidase-Like Protein; FAD/FMN-Dependent Dehydrogenase; FAD Linked Oxidase; Oxidoreductase; FAD/FMN-Containing Dehydrogenase; Dehydrogenase; Fad-Dependent Oxidoreductase; FAD Linked Oxidase-Like

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSGLVDPDSTFLKTIGKLSNSLSIGRGVDQKEVIPKGWNAHWEAITKLKRSFDAIPAGERVRLAKKTSNLFRGRSDAGHG
LDVAALGGVIAIDPVNATADVQGMCTYEDLVDATLSYGLMPLVVPQLKTITLGGAVTGMGVESTSFRNGLPHESVLEMDI
FTGTGEIVTCSPTENVDLYRGFPNSYGSLGYAVRLKIELEPVQDYVQLRHVRFNDLESLTKAIEEVASSLEFDNQPVDYL
DGVVFSPTEAYLVLGTQTSQPGPTSDYTRDLSYYRSLQHPEGITYDRLTIRDYIWRWDTDWFWCSRAFGTQNPVVRKLWP
RDLLRSSFYWKIIGWDRKYSIADRLEERKGRPARERVVQDVEVTIDKLPEFLKWFFESSDIEPLWLCPIKLREVPGSSVG
AGEILSSAEAIDSGAAEHPWPLYPLKKDVLWVNIGFWSSVPVDLMGSDAPEGAFNREIERVMAELGGHKSLYSEAFYTRE
DFEKLYGGTIPALLKKQWDPHSRFPGLYEKTVKGA

Sequences:

>Translated_515_residues
MSGLVDPDSTFLKTIGKLSNSLSIGRGVDQKEVIPKGWNAHWEAITKLKRSFDAIPAGERVRLAKKTSNLFRGRSDAGHG
LDVAALGGVIAIDPVNATADVQGMCTYEDLVDATLSYGLMPLVVPQLKTITLGGAVTGMGVESTSFRNGLPHESVLEMDI
FTGTGEIVTCSPTENVDLYRGFPNSYGSLGYAVRLKIELEPVQDYVQLRHVRFNDLESLTKAIEEVASSLEFDNQPVDYL
DGVVFSPTEAYLVLGTQTSQPGPTSDYTRDLSYYRSLQHPEGITYDRLTIRDYIWRWDTDWFWCSRAFGTQNPVVRKLWP
RDLLRSSFYWKIIGWDRKYSIADRLEERKGRPARERVVQDVEVTIDKLPEFLKWFFESSDIEPLWLCPIKLREVPGSSVG
AGEILSSAEAIDSGAAEHPWPLYPLKKDVLWVNIGFWSSVPVDLMGSDAPEGAFNREIERVMAELGGHKSLYSEAFYTRE
DFEKLYGGTIPALLKKQWDPHSRFPGLYEKTVKGA
>Mature_514_residues
SGLVDPDSTFLKTIGKLSNSLSIGRGVDQKEVIPKGWNAHWEAITKLKRSFDAIPAGERVRLAKKTSNLFRGRSDAGHGL
DVAALGGVIAIDPVNATADVQGMCTYEDLVDATLSYGLMPLVVPQLKTITLGGAVTGMGVESTSFRNGLPHESVLEMDIF
TGTGEIVTCSPTENVDLYRGFPNSYGSLGYAVRLKIELEPVQDYVQLRHVRFNDLESLTKAIEEVASSLEFDNQPVDYLD
GVVFSPTEAYLVLGTQTSQPGPTSDYTRDLSYYRSLQHPEGITYDRLTIRDYIWRWDTDWFWCSRAFGTQNPVVRKLWPR
DLLRSSFYWKIIGWDRKYSIADRLEERKGRPARERVVQDVEVTIDKLPEFLKWFFESSDIEPLWLCPIKLREVPGSSVGA
GEILSSAEAIDSGAAEHPWPLYPLKKDVLWVNIGFWSSVPVDLMGSDAPEGAFNREIERVMAELGGHKSLYSEAFYTRED
FEKLYGGTIPALLKKQWDPHSRFPGLYEKTVKGA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI13375618, Length=464, Percent_Identity=25.2155172413793, Blast_Score=129, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17570305, Length=445, Percent_Identity=20.8988764044944, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17568041, Length=450, Percent_Identity=20.6666666666667, Blast_Score=98, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57769; Mature: 57638

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLVDPDSTFLKTIGKLSNSLSIGRGVDQKEVIPKGWNAHWEAITKLKRSFDAIPAGER
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
VRLAKKTSNLFRGRSDAGHGLDVAALGGVIAIDPVNATADVQGMCTYEDLVDATLSYGLM
EEHHHHHHHHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCEECHHHHHHHHHHHCCH
PLVVPQLKTITLGGAVTGMGVESTSFRNGLPHESVLEMDIFTGTGEIVTCSPTENVDLYR
HHHHCCCEEEEECCCEECCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEE
GFPNSYGSLGYAVRLKIELEPVQDYVQLRHVRFNDLESLTKAIEEVASSLEFDNQPVDYL
CCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DGVVFSPTEAYLVLGTQTSQPGPTSDYTRDLSYYRSLQHPEGITYDRLTIRDYIWRWDTD
CCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCC
WFWCSRAFGTQNPVVRKLWPRDLLRSSFYWKIIGWDRKYSIADRLEERKGRPARERVVQD
HHHHHHCCCCCCCHHHHHCHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHH
VEVTIDKLPEFLKWFFESSDIEPLWLCPIKLREVPGSSVGAGEILSSAEAIDSGAAEHPW
HHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLYPLKKDVLWVNIGFWSSVPVDLMGSDAPEGAFNREIERVMAELGGHKSLYSEAFYTRE
CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHH
DFEKLYGGTIPALLKKQWDPHSRFPGLYEKTVKGA
HHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SGLVDPDSTFLKTIGKLSNSLSIGRGVDQKEVIPKGWNAHWEAITKLKRSFDAIPAGER
CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
VRLAKKTSNLFRGRSDAGHGLDVAALGGVIAIDPVNATADVQGMCTYEDLVDATLSYGLM
EEHHHHHHHHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCEECHHHHHHHHHHHCCH
PLVVPQLKTITLGGAVTGMGVESTSFRNGLPHESVLEMDIFTGTGEIVTCSPTENVDLYR
HHHHCCCEEEEECCCEECCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEE
GFPNSYGSLGYAVRLKIELEPVQDYVQLRHVRFNDLESLTKAIEEVASSLEFDNQPVDYL
CCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DGVVFSPTEAYLVLGTQTSQPGPTSDYTRDLSYYRSLQHPEGITYDRLTIRDYIWRWDTD
CCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCC
WFWCSRAFGTQNPVVRKLWPRDLLRSSFYWKIIGWDRKYSIADRLEERKGRPARERVVQD
HHHHHHCCCCCCCHHHHHCHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHH
VEVTIDKLPEFLKWFFESSDIEPLWLCPIKLREVPGSSVGAGEILSSAEAIDSGAAEHPW
HHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLYPLKKDVLWVNIGFWSSVPVDLMGSDAPEGAFNREIERVMAELGGHKSLYSEAFYTRE
CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHH
DFEKLYGGTIPALLKKQWDPHSRFPGLYEKTVKGA
HHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA