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The map label for this gene is 62389389

Identifier: 62389389

GI number: 62389389

Start: 520864

End: 521646

Strand: Direct

Name: 62389389

Synonym: cg0579

Alternate gene names: NA

Gene position: 520864-521646 (Clockwise)

Preceding gene: 62389388

Following gene: 62389391

Centisome position: 15.87

GC content: 55.3

Gene sequence:

>783_bases
ATGGATGAGCTGCTCAAACAGGAAGTCAAGGATTTCCTCACCACCAGGCGTGCACGGATTACGCCGGCCGCTGCGGGACT
AGAAACGCAGCCGTGGAGTGATCGTCGGGTGCCGGGGCTTCGGCGGGAAGAAGTCGCGGATCTGGCGGGCATTTCTTTGG
AGTATTACATCCGGTTTGAGCGCGGAAATCTCAAGGGTGCATCGCCTGAAATATTGCAATCGTTGGCTAAGGCTCTCCAA
CTGAGCCCAATTGAGCGCGAACACCTTCACAATTTGGCTTATCGCGCCGACCATCCGCGCAACCTACCTAGTGCAGAGAC
CCCAACGGCACCCCTCCAGGACATCGTTGATGCGGTCACAGATAAACCGGCGTGGATCCGCAACGAGCAGATGGATATTT
TGGCTACAAATCGGCTCTGCGCGGAACTTTACGCCCCGATTTTCAAGGATCTGCCCGATCGGCCCAACACTGCGCGGCAT
TGCTTTATCGGCGCAACAGCCTCCGAGTTCTGGGTGGACCGGGATCAGTTCAGTGCGGAGTTCGCTGCCAAACTACGCCT
CGAGTACGCCCGGCGCCCCAGCGTGCCAGGTTTAAAGGAGCTTATCGACGAGCTCCATCAGAAAAGTTCTGTTTTCCGCG
ATAATTGGGCGTCTGCTGATGTTTTGTCATTCGGCTCTGGCATCAAACGTTTCAGGCACCCAACACTGGGGGAGCGGGTC
TATGAATACGAGACGTTTAATCTCAATAGTGCACCGGGGTATGTGTTGAGCATTTACTTTTAG

Upstream 100 bases:

>100_bases
CAGGATGGGTCGGAACGTTCGCGTCGTTTGCGGTGTGGTTCTGGGTCATTTGGTGGGCAGCGGTAGGAAATACAAAAAGC
CCACTCTAAGATGGCAGGGT

Downstream 100 bases:

>100_bases
GTGGTGGAGGGGCGCGTCGACAAGCTTTTTAAATGTTTTTCTTGGTGACTACGCTGACTCCGCCCATGAACGCCAGGCCT
TTGATGTGGACCGTGGGCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein; XRE Family Transcription Regulator Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDELLKQEVKDFLTTRRARITPAAAGLETQPWSDRRVPGLRREEVADLAGISLEYYIRFERGNLKGASPEILQSLAKALQ
LSPIEREHLHNLAYRADHPRNLPSAETPTAPLQDIVDAVTDKPAWIRNEQMDILATNRLCAELYAPIFKDLPDRPNTARH
CFIGATASEFWVDRDQFSAEFAAKLRLEYARRPSVPGLKELIDELHQKSSVFRDNWASADVLSFGSGIKRFRHPTLGERV
YEYETFNLNSAPGYVLSIYF

Sequences:

>Translated_260_residues
MDELLKQEVKDFLTTRRARITPAAAGLETQPWSDRRVPGLRREEVADLAGISLEYYIRFERGNLKGASPEILQSLAKALQ
LSPIEREHLHNLAYRADHPRNLPSAETPTAPLQDIVDAVTDKPAWIRNEQMDILATNRLCAELYAPIFKDLPDRPNTARH
CFIGATASEFWVDRDQFSAEFAAKLRLEYARRPSVPGLKELIDELHQKSSVFRDNWASADVLSFGSGIKRFRHPTLGERV
YEYETFNLNSAPGYVLSIYF
>Mature_260_residues
MDELLKQEVKDFLTTRRARITPAAAGLETQPWSDRRVPGLRREEVADLAGISLEYYIRFERGNLKGASPEILQSLAKALQ
LSPIEREHLHNLAYRADHPRNLPSAETPTAPLQDIVDAVTDKPAWIRNEQMDILATNRLCAELYAPIFKDLPDRPNTARH
CFIGATASEFWVDRDQFSAEFAAKLRLEYARRPSVPGLKELIDELHQKSSVFRDNWASADVLSFGSGIKRFRHPTLGERV
YEYETFNLNSAPGYVLSIYF

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29643; Mature: 29643

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELLKQEVKDFLTTRRARITPAAAGLETQPWSDRRVPGLRREEVADLAGISLEYYIRFE
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEEE
RGNLKGASPEILQSLAKALQLSPIEREHLHNLAYRADHPRNLPSAETPTAPLQDIVDAVT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHC
DKPAWIRNEQMDILATNRLCAELYAPIFKDLPDRPNTARHCFIGATASEFWVDRDQFSAE
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCHHHHHHH
FAAKLRLEYARRPSVPGLKELIDELHQKSSVFRDNWASADVLSFGSGIKRFRHPTLGERV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH
YEYETFNLNSAPGYVLSIYF
HHEEEECCCCCCCEEEEEEC
>Mature Secondary Structure
MDELLKQEVKDFLTTRRARITPAAAGLETQPWSDRRVPGLRREEVADLAGISLEYYIRFE
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEEE
RGNLKGASPEILQSLAKALQLSPIEREHLHNLAYRADHPRNLPSAETPTAPLQDIVDAVT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHC
DKPAWIRNEQMDILATNRLCAELYAPIFKDLPDRPNTARHCFIGATASEFWVDRDQFSAE
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCHHHHHHH
FAAKLRLEYARRPSVPGLKELIDELHQKSSVFRDNWASADVLSFGSGIKRFRHPTLGERV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH
YEYETFNLNSAPGYVLSIYF
HHEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA