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The map label for this gene is ccsB [H]

Identifier: 62389341

GI number: 62389341

Start: 465948

End: 467573

Strand: Direct

Name: ccsB [H]

Synonym: cg0523

Alternate gene names: 62389341

Gene position: 465948-467573 (Clockwise)

Preceding gene: 62389340

Following gene: 62389342

Centisome position: 14.19

GC content: 58.0

Gene sequence:

>1626_bases
ATGCTCAAAACAGTCAAGCTGTATGCACGGAAAGCGTGGAACTGGCTCACCAGCATGCGCACAGCACTGGCGTTGCTGTT
TCTTCTGGCGATCGCTGCCATCCCTGGCGCATTGCTCCCGCAGCGTTCCCTCAATGAATCAAACGTCATTGAATACATTG
AGAACAATGGAAAGCTCGCTGAGTTCTACGACAAGATTCAGCTTTTCGACGTCTTCTCCTCCACGTGGTTTACCGCCATC
TATGTGCTGCTCCTGATCTCTTTGGTCGGCTGTATTCTCCCTCGAAGCTGGGAACACTACAAAGCCATGCGCGCACCTGT
GGTGCGGGCGCCAAGGAACCTCGAACGTTTGGCTCACAACGGCGAGGGGCTCGTCGAAAAGCGTGAAGAAGAGGTAGAAA
AAGACGCCCGTAAACTCCTCAAAGGCTGGAAAATCACCGAATATTCCGCCGAGGAAGACCGCGCGGGAGTGCGCTCCATT
GCCGCTGAAAAGGGCTACACGCGCGAACTCTTCAACCTGATTTTCCACCTGGGCATCGTGGGCATGATTGTGACCGCAGG
CCTGGGACGACTGTTTTACTACGAAGGCCACGTCATCGTCGTGACCGACGGCGAGCAAAACCAACAGAACTCCGTGTTCT
GCAACACTGCCACCGCCAACTACGACTCCTTCCGCGCCGGCGCCAACTTCGACGGCACCGGGCTGACCACCTTCTGCTTT
GAAGCGCACGATTTCTCCGCCGACTACCTCGCCAACGGCCAGGCCGAGATGTTCCGCTCGAATATTTCCTACGCAGTCGG
CGACGACATCCAAAACGACCCAGAAACCTGGGAAGACTACGAACTTCGCGTCAACCACCCACTGCGCATCGAAGGCGACC
GCGTCTACCTTCAGGGCCACGGCTTCGCCCCAACATTCACCGTGACCTGGCCAAATGGCGAGACCCGCACCCAGACCGTG
CAGTGGCGCCCAGACGACCCGACCTTCTTCCTGTCCTCAGGCGTGGTCCGTTTCGATCCACCCGCCGGCATGTACCCAGA
CCTTTACGAGCGCCGCCAAAACCAGTTGGCCATCCAGGGACTTTTCGCACCGACCGCGGAATGGGAAGGCGACAACAACG
AACTGCTGACCTCCTCCTACCCGGCGATGCGTGACCCAGCCGTGGCGATCGATATTTACCGCGGCGACAATGGCCTCGAT
ACCGGCATCGGACAGTCATTGTTCAGCCTGGACTCTAGTCTCATGCACAGCGGCGTGCTGCAAAAAATTGAGCGCGTCAA
CCTCCAAATCGGCGACACCGTCACCCTGGATGATGGCACCACCGTCTCCTTCGACGGCGCGTCAGAATTTGCCAACTACC
AGATCAGCCGCGACCCCACACAAAACTGGGTGCTGGTCACCACCGTGATTTCGCTGGTCTCCCTGGTTGGATCCCTGATG
ATCCGACGCCGCCGCATTTGGGTGCGTTTCTATCCACAAGAAAACGGAACCACCCGCGTGGAAACCGGCGGACTTGCCCG
CACCGACCGCGCAGGCTGGGGTGGCGAATACGAGAAATTCCACCGCGAACTGCTGGGTCTGAAGGAGGAAGATGAAGACG
AAGAGTACTTCGACCACGACGACTAA

Upstream 100 bases:

>100_bases
ATGGGCAATTTTTATCAACTGGGTCCGTCAGTGGACCGTTGAATACGGCGCAACACTGCTCTAGAAAAAGACTTTTAGTA
GGAAGAGAATCGGCACGACA

Downstream 100 bases:

>100_bases
CACCGCAATTTAAAGGCTTTTCAAGCCTGCCCCACATCGAAGCAGTTTTCACAAAGAATAAGGTTGGAAAATTATGTTGC
CCGTCAACCAAACGTATGCG

Product: membrane protein required for cytochrome c biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLERLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSSLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD

Sequences:

>Translated_541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLERLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSSLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD
>Mature_541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLERLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSSLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 61245; Mature: 61245

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH
EFYDKIQLFDVFSSTWFTAIYVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLERLAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCHHHHHHHCC
GEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSIAAEKGYTRELFNLIFHLGIV
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
HHHHHHCCCCEEEEECEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGH
ECCCCCHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEC
GFAPTFTVTWPNGETRTQTVQWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQG
CCCCEEEEECCCCCCCCEEEEECCCCCCEEECCCEEEECCCCCCCCHHHHHHHHCEEEEE
LFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLDTGIGQSLFSLDSSLMHSGVL
EECCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
HHHHHCCEEECCEEEECCCCEEEECCHHHHHCEEECCCCCCCEEHHHHHHHHHHHHHHHH
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHD
HHHEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH
EFYDKIQLFDVFSSTWFTAIYVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLERLAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCHHHHHHHCC
GEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSIAAEKGYTRELFNLIFHLGIV
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
HHHHHHCCCCEEEEECEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGH
ECCCCCHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEC
GFAPTFTVTWPNGETRTQTVQWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQG
CCCCEEEEECCCCCCCCEEEEECCCCCCEEECCCEEEECCCCCCCCHHHHHHHHCEEEEE
LFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLDTGIGQSLFSLDSSLMHSGVL
EECCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
HHHHHCCEEECCEEEECCCCEEEECCHHHHHCEEECCCCCCCEEHHHHHHHHHHHHHHHH
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHD
HHHEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA