| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ctpB [H]
Identifier: 62389334
GI number: 62389334
Start: 457266
End: 459902
Strand: Direct
Name: ctpB [H]
Synonym: cg0515
Alternate gene names: 62389334
Gene position: 457266-459902 (Clockwise)
Preceding gene: 62389333
Following gene: 62389335
Centisome position: 13.93
GC content: 54.15
Gene sequence:
>2637_bases GTGAGCACACCGGATTCTTCCTCGGTGGACAAGGCCGTAAACACTGCTATCTCTGACGCCAAAACAGCGGCGCTCAAGGC AGGTGTTGGATTGAACCGAGCCACCGCCTCAGAAGAAGAGGAAGATTTAAGCTCAAGCATTAAGGTTTCTTTGGCCTTTG AGCTCGAGGGGTTAAGCAATGCACCATCGTTGATGGTGGTGGAAAAAGCCCTAGAGAAGATCCCCGGTGTATCCGCGGAT CTGATTTACCCTTCACAAACTGCATGGATTACAGCAACTGATCGGGTACATCCCGAAACCCTCATTGAGGTGTTTGAGCA GTTCGGCATCAAAGCACACCTTTCTAATTCATCGCTGCTGCGCAGGCATCAACAGCTCAGCGCGGAAGTAAATAGGGAAG CACGCCTTGATCGTTACCGCTCCCGAATGGATGCCAAGCGAATCTCGCCTCGTGTGCGAAGGCATAACCGACAAGAAATG GTACATGCGGTACGCGCTCGTGAAAGTGGTTGGATTAAACGCAGGAATCACACCACCTCGCAGCATGAAGACCCAATGTC GGGCGATGTGCTGTTCACCGCCCGCGCACTGATTACACCTAAGCGTTTGTGGGTGTCGTTGCCGTTTGCGCTCATCGTAT TGGCGTTATCGTTGAATCCTTCGTGGCAGTTTGATTATTGGCAGTGGTTGTCCGCTGTGTTGGCTATTCCTGTGGTGGTG TGGGGTGCCTGGCCGTTTCACCGCGCTGCAGCAGGCGGTATTCGTCGAGGAATTTCCGCTCTTGATGCGACCAGCTCAAT CGCTATTGCTGCTGCATACGCGTGGTCTATCGCCATGCTGTTGTTTGAAACCCCAGGAGGTAAATCCTGGCGGTCATATC CGTCCTGGTTCGCTTTTGACCACGGCACGTTGACCCAAAACGAGATTTATTTTGATGTGGCCTGCGGAATCACCGTGTTG CTTCTTGCCGGACGGCTGCTGACAAGGCGTCGAAGCCAATCCAGTTTGTTAGCGGAACTTGGTCGCCTCCAAATCGATCC ACAGCGCATTGTCACTGTGGTGCGTAAACACCGATTGAAGCGCGTAGTCCAGGAACTGAACATTCCAGTGCAGGAAGTCC GTGTCAATGACGATGTGAAAGTTCCACCTAATACCACGATCCCTGTGGATGGCACTGTCATCGGTGGCGGTTCGCGGATC GCAGCTAGCATCATCATGGGACAAGACCAGCGTGATGTAAAAGTAAATGACAAAGTTTTCGCCGGCAGCCTCAACCTCGA ATCCGAAATCAAGGTTCGTGTTATTCGCACTGGTCACCGCACCCGCATCGCCGCGGTACATAGGTGGGTTAAAGAAGCGA CGTTGAAGGAAAACCGCCACAATAGGGCAGCGATCCGTTCGGCCGGTAACCTTGTGCCCATCACGTTCACCCTTGCTGTG GTGGACTTCTGTCTGTGGGCACTGATCTCTGGAAACATCAACGCTGCATTTACCACTACCTTGGCTGTCCTTGCGTGCGT GGCTCCGGTGGCCTTAGCGTTGTCTGCTCCACTTGCCACGAGGAATTCCATCGAAGCTGCAGCACGACACGGTATTTTGG TCCGCTCTGGTGAAATTTTCCGAGTTCTCGATGATGTGGATACTGCCGTATTTAATCGTGTGGGCACACTAACCGATGGC GAAATGACAGTGGAAACCGTCACAGCAGACAAAGGCGAGGACCCAGAACTAGTGCTGCGTGTCGCCGGGGCGTTGGCCAT GGAATCCCACCACGCGATTTCCAAAGCACTGGTGAAAGCATCCCGTGAAGCTCGTGATACCGGCGCCGGTGGTGAAGATG TCCCACACTGGATTGAAGTAGGCAACGTGGAAATCACCGAAGCCGGCTCATTCCAAGCAACCATCGAGCTGCCACTGATC AAACCATCTGGCGAAAAAATCATGCGCACCACAGAAGCACTCCTGTGGCGACCACGATCCATGACAGAAGTCCGTGAGCA CTTAAGCCCCCGACTAGTGGCAGCAGCAACCTCAGGTGGCGCACCACTGATCGTGCGATGGAAAGGCAAAGACCGCGGAG TTATCACTCTAAGTGACCACGTGAGATCAGATTCCTCCGATGCGATTATTGCGATTGAAGAACAAGGCATCGAGACCATG ATGCTTTCACGTGATACTTACCCGGTGGCACGTCGATACGCAGACAGCTTAGGCATCACCCACGTCTTGGCCGGCATCGC GCCGGGCAAGAAAGCCCAGGTCGTCCGTGCAGTCCACACCCGCGGATCCACTGTCGCGATGATCGGCGATGAATCAGTAA TGGACTGTTTGAAAGTCGCTGACGTGGGTGTACTGATGGGCGTCGATCGTCCCTCAGATCTGCGTGATGATTCCGATGAC CCGGCAGCTGACGTTGTGGTCATGCGCGAAGAGGTCATGAGCGTGCCGACGCTGTTTAAACTGGCTCGACGCTACGCCAA GTTGGTCAATGGCAATATTGCTCTGGCCTGGATCTATAACGGTGTTGCCATGGTGCTTGCAGTGTCTGGCTTGCTGCATC CAATGGCTGCGACCGTGGCTATGCTGGCGTCTTCGCTGCTTATTGAATGGCGCTCGGGCAGGGCGCGCAAGTACTAA
Upstream 100 bases:
>100_bases TACTTTTTCGCTACCGTGAGTCTTACCGTGAGCCTTATACTGTGAGGACATTAAAAGTGACACCTCTTTTTCTATCTTTT ACAACCCAAGAAGGTTTATC
Downstream 100 bases:
>100_bases CCAGCAATTCCCAAGCCCAAAAACCCCTCCCATATAGTTCTTTTTACTGATGCATTGTCCTCAATTAGGTGTGGCTTCTT TTCCTAAATTGGGATAAATG
Product: cation-transporting P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATASEEEEDLSSSIKVSLAFELEGLSNAPSLMVVEKALEKIPGVSAD LIYPSQTAWITATDRVHPETLIEVFEQFGIKAHLSNSSLLRRHQQLSAEVNREARLDRYRSRMDAKRISPRVRRHNRQEM VHAVRARESGWIKRRNHTTSQHEDPMSGDVLFTARALITPKRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGGKSWRSYPSWFAFDHGTLTQNEIYFDVACGITVL LLAGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRI AASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKEATLKENRHNRAAIRSAGNLVPITFTLAV VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDG EMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLI KPSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSDLRDDSDD PAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVLAVSGLLHPMAATVAMLASSLLIEWRSGRARKY
Sequences:
>Translated_878_residues MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATASEEEEDLSSSIKVSLAFELEGLSNAPSLMVVEKALEKIPGVSAD LIYPSQTAWITATDRVHPETLIEVFEQFGIKAHLSNSSLLRRHQQLSAEVNREARLDRYRSRMDAKRISPRVRRHNRQEM VHAVRARESGWIKRRNHTTSQHEDPMSGDVLFTARALITPKRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGGKSWRSYPSWFAFDHGTLTQNEIYFDVACGITVL LLAGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRI AASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKEATLKENRHNRAAIRSAGNLVPITFTLAV VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDG EMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLI KPSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSDLRDDSDD PAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVLAVSGLLHPMAATVAMLASSLLIEWRSGRARKY >Mature_877_residues STPDSSSVDKAVNTAISDAKTAALKAGVGLNRATASEEEEDLSSSIKVSLAFELEGLSNAPSLMVVEKALEKIPGVSADL IYPSQTAWITATDRVHPETLIEVFEQFGIKAHLSNSSLLRRHQQLSAEVNREARLDRYRSRMDAKRISPRVRRHNRQEMV HAVRARESGWIKRRNHTTSQHEDPMSGDVLFTARALITPKRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVVW GAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGGKSWRSYPSWFAFDHGTLTQNEIYFDVACGITVLL LAGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIA ASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKEATLKENRHNRAAIRSAGNLVPITFTLAVV DFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDGE MTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIK PSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETMM LSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSDLRDDSDDP AADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVLAVSGLLHPMAATVAMLASSLLIEWRSGRARKY
Specific function: Involved In Copper Efflux. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=678, Percent_Identity=26.2536873156342, Blast_Score=177, Evalue=5e-44, Organism=Homo sapiens, GI115529486, Length=696, Percent_Identity=24.4252873563218, Blast_Score=163, Evalue=8e-40, Organism=Homo sapiens, GI55743073, Length=553, Percent_Identity=26.9439421338156, Blast_Score=154, Evalue=5e-37, Organism=Escherichia coli, GI1786691, Length=666, Percent_Identity=24.4744744744745, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1789879, Length=532, Percent_Identity=23.8721804511278, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI1786914, Length=440, Percent_Identity=23.1818181818182, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17556548, Length=696, Percent_Identity=25.1436781609195, Blast_Score=148, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320475, Length=679, Percent_Identity=24.8895434462445, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319772, Length=651, Percent_Identity=22.5806451612903, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI221329854, Length=407, Percent_Identity=25.0614250614251, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000579 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 95908; Mature: 95777
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATASEEEEDLSSSIKVSLAFELEGLSN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCC APSLMVVEKALEKIPGVSADLIYPSQTAWITATDRVHPETLIEVFEQFGIKAHLSNSSLL CCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHH RRHQQLSAEVNREARLDRYRSRMDAKRISPRVRRHNRQEMVHAVRARESGWIKRRNHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCEECCCCCCC QHEDPMSGDVLFTARALITPKRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV CCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGGKSWRSYPSWFAFD HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEC HGTLTQNEIYFDVACGITVLLLAGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLK CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIAASIIMGQDQRDVKVNDKVF HHHHHHCCCHHHEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEECCEEE AGSLNLESEIKVRVIRTGHRTRIAAVHRWVKEATLKENRHNRAAIRSAGNLVPITFTLAV EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHH VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCEE RVLDDVDTAVFNRVGTLTDGEMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKA EHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIKPSGEKIMRTTEALLWRPRS HHHHHCCCCCCCCCCCCEEECCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC MTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM HHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVA EECCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH DVGVLMGVDRPSDLRDDSDDPAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYN HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHH GVAMVLAVSGLLHPMAATVAMLASSLLIEWRSGRARKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STPDSSSVDKAVNTAISDAKTAALKAGVGLNRATASEEEEDLSSSIKVSLAFELEGLSN CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCC APSLMVVEKALEKIPGVSADLIYPSQTAWITATDRVHPETLIEVFEQFGIKAHLSNSSLL CCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHH RRHQQLSAEVNREARLDRYRSRMDAKRISPRVRRHNRQEMVHAVRARESGWIKRRNHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCEECCCCCCC QHEDPMSGDVLFTARALITPKRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV CCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGGKSWRSYPSWFAFD HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEC HGTLTQNEIYFDVACGITVLLLAGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLK CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIAASIIMGQDQRDVKVNDKVF HHHHHHCCCHHHEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEECCEEE AGSLNLESEIKVRVIRTGHRTRIAAVHRWVKEATLKENRHNRAAIRSAGNLVPITFTLAV EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHH VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCEE RVLDDVDTAVFNRVGTLTDGEMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKA EHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIKPSGEKIMRTTEALLWRPRS HHHHHCCCCCCCCCCCCEEECCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC MTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM HHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVA EECCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH DVGVLMGVDRPSDLRDDSDDPAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYN HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHH GVAMVLAVSGLLHPMAATVAMLASSLLIEWRSGRARKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476188; 11234002 [H]