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The map label for this gene is 62389224

Identifier: 62389224

GI number: 62389224

Start: 341348

End: 342379

Strand: Direct

Name: 62389224

Synonym: cg0395

Alternate gene names: NA

Gene position: 341348-342379 (Clockwise)

Preceding gene: 62389221

Following gene: 62389225

Centisome position: 10.4

GC content: 59.59

Gene sequence:

>1032_bases
TTGATTGTCATGAAATCCATTGATCTTGAGCAGCTGGCGGGCACGCAATCGCGCACGTATCAATCGCGAAAGATCACCGA
TGAGATGGTCGCCCGGCCGGTGCATGTGGCGATCGCGTTGTGGGAAGTGCCGTGGGAGTCGGCAAAATCCGGCAAGATTG
AGGGTTGGGTCATTGCCGTGGATTCGCCGCGTGGGCGGTTTGTGCGCAGCGGGCAGACCAAAAATGGCGACGCCGTCAAC
CGGACTGTGTCGATGCTGAAATCAGCGTTGAAAGGGGTCCGCGGGAAGGCGTGGATTGTAACTGGGCGTCGACAAGCAGC
TTTACGCGCAGCCCTGGTGCGCGAAAACTACCTGGTCACCGGAAGCTTCGCCGAGCAAAATAGGGCCGGCGTGAAGGCGT
CGGCGATCTCGCGCCGCGCCGAACAATCCGCGCTCTACAAGGCGAAAAAAATCGGCGAATTCGCCGAGCGCGCCCCACGC
GTCAAAGAGCGGCAAGAGGCACATTGGTGGCCACGGTTGTCACGCACGCAAGGCACCGCAGGCGTTTTACGCTTAGCGAC
GGACGCCTCTACCGATGGGGTCTTCCGCGGCGCCATGTGCTTCGTAGCCTCAAACGGCGACTACCTCCTGGAGACCCAAG
ACACCACCGCAAGCTCCGACGAATTAGAACTCGAAAGCATCACCCACGCCCTGATCTACCTCAAAACCATCGGCGCGACC
CAAGCCATCATCGAATCCGACAGCAAAGCCGCACTTGAAGCCATCGACTTCATCCTCAACAACCGACCGCGCCGGGGCAG
GTGGCGCGGCATCACCGCATGCGCCCGCAACCGGTTCCGGGATGCCTGGGAAGCGCTTATCGACGACTGCGTTGTGGAAT
TATCCCGCGTACTAGGGCACGCCGGGGATCCACTGAACCAAGCAGCCGACCAAATCGCATACATGGGCATGCGCGCCGTA
ATTTTTGAACAAAAATCCGCACACCCCACATTGCTCAAAGGAATTGACAAGGCGCTTCGCAAGGCCGAGTAA

Upstream 100 bases:

>100_bases
TTTAAAGTCGCTGTTTTTTGATGCATCCATGATAGGAATAGAGCCTAGTGCATGATGGCTGATTTTCCTGTTAGGTGCCA
CCGACCCCAGTGATGATAAC

Downstream 100 bases:

>100_bases
GGTGGGCAACGAGTCGGTGAGAGTATGAGGAATATTTGATGAGCAACAAACGCATCGGTGTAGTGATCGTTTCCTACGGA
CACGAACAAGATGTTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIVMKSIDLEQLAGTQSRTYQSRKITDEMVARPVHVAIALWEVPWESAKSGKIEGWVIAVDSPRGRFVRSGQTKNGDAVN
RTVSMLKSALKGVRGKAWIVTGRRQAALRAALVRENYLVTGSFAEQNRAGVKASAISRRAEQSALYKAKKIGEFAERAPR
VKERQEAHWWPRLSRTQGTAGVLRLATDASTDGVFRGAMCFVASNGDYLLETQDTTASSDELELESITHALIYLKTIGAT
QAIIESDSKAALEAIDFILNNRPRRGRWRGITACARNRFRDAWEALIDDCVVELSRVLGHAGDPLNQAADQIAYMGMRAV
IFEQKSAHPTLLKGIDKALRKAE

Sequences:

>Translated_343_residues
MIVMKSIDLEQLAGTQSRTYQSRKITDEMVARPVHVAIALWEVPWESAKSGKIEGWVIAVDSPRGRFVRSGQTKNGDAVN
RTVSMLKSALKGVRGKAWIVTGRRQAALRAALVRENYLVTGSFAEQNRAGVKASAISRRAEQSALYKAKKIGEFAERAPR
VKERQEAHWWPRLSRTQGTAGVLRLATDASTDGVFRGAMCFVASNGDYLLETQDTTASSDELELESITHALIYLKTIGAT
QAIIESDSKAALEAIDFILNNRPRRGRWRGITACARNRFRDAWEALIDDCVVELSRVLGHAGDPLNQAADQIAYMGMRAV
IFEQKSAHPTLLKGIDKALRKAE
>Mature_343_residues
MIVMKSIDLEQLAGTQSRTYQSRKITDEMVARPVHVAIALWEVPWESAKSGKIEGWVIAVDSPRGRFVRSGQTKNGDAVN
RTVSMLKSALKGVRGKAWIVTGRRQAALRAALVRENYLVTGSFAEQNRAGVKASAISRRAEQSALYKAKKIGEFAERAPR
VKERQEAHWWPRLSRTQGTAGVLRLATDASTDGVFRGAMCFVASNGDYLLETQDTTASSDELELESITHALIYLKTIGAT
QAIIESDSKAALEAIDFILNNRPRRGRWRGITACARNRFRDAWEALIDDCVVELSRVLGHAGDPLNQAADQIAYMGMRAV
IFEQKSAHPTLLKGIDKALRKAE

Specific function: Unknown

COG id: COG0328

COG function: function code L; Ribonuclease HI

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37908; Mature: 37908

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMKSIDLEQLAGTQSRTYQSRKITDEMVARPVHVAIALWEVPWESAKSGKIEGWVIAV
CEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCCCCCCCCEEEEEE
DSPRGRFVRSGQTKNGDAVNRTVSMLKSALKGVRGKAWIVTGRRQAALRAALVRENYLVT
ECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEE
GSFAEQNRAGVKASAISRRAEQSALYKAKKIGEFAERAPRVKERQEAHWWPRLSRTQGTA
CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
GVLRLATDASTDGVFRGAMCFVASNGDYLLETQDTTASSDELELESITHALIYLKTIGAT
CEEEEECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCHH
QAIIESDSKAALEAIDFILNNRPRRGRWRGITACARNRFRDAWEALIDDCVVELSRVLGH
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGDPLNQAADQIAYMGMRAVIFEQKSAHPTLLKGIDKALRKAE
CCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVMKSIDLEQLAGTQSRTYQSRKITDEMVARPVHVAIALWEVPWESAKSGKIEGWVIAV
CEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCCCCCCCCEEEEEE
DSPRGRFVRSGQTKNGDAVNRTVSMLKSALKGVRGKAWIVTGRRQAALRAALVRENYLVT
ECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEE
GSFAEQNRAGVKASAISRRAEQSALYKAKKIGEFAERAPRVKERQEAHWWPRLSRTQGTA
CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
GVLRLATDASTDGVFRGAMCFVASNGDYLLETQDTTASSDELELESITHALIYLKTIGAT
CEEEEECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCHH
QAIIESDSKAALEAIDFILNNRPRRGRWRGITACARNRFRDAWEALIDDCVVELSRVLGH
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGDPLNQAADQIAYMGMRAVIFEQKSAHPTLLKGIDKALRKAE
CCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA