| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62389193
Identifier: 62389193
GI number: 62389193
Start: 310177
End: 311328
Strand: Direct
Name: 62389193
Synonym: cg0356
Alternate gene names: NA
Gene position: 310177-311328 (Clockwise)
Preceding gene: 62389192
Following gene: 62389197
Centisome position: 9.45
GC content: 59.2
Gene sequence:
>1152_bases ATGGCATTCGCCCTGTGGGGTGGTTGGCGTCAAGGCGCCTTCACCTCGCTGCTGTCCACCGTCGGCGTCGTTTCTGGCCT GGTAGTTGGCGCAGCAGCAGCTCCATTTGTCATGGGTCTCACCGATTCCACCGCGCTTCGCTTCCTCCTGGCGATCGGCA CCGTGGTGCTGCTGGTTGGTTTGGGAAATCTCATCGGCGCCCACTTGGGTGCTGCGATTAGAGACAACATCAAATTCCGA AGTTCCAGGACCTTAGATTCTGGGCTCGGCGCCATTTTCCAAGTATTGGCCACCTTGATCGTGGTGTGGCTCGTCGCAAT TCCCCTGGCCACAGGCCTCCCCGGAACTGTCGCCAGCGGAATTAGAGACTCCCGCATCCTGGGCTTTGTAGACAAATACA CCCCGCAAGGCCTAGATACCCTGCCCTCCAAAATCGCTGCGATGCTCAGCGAATCCGGCCTCCCACCACTGATTTCCCCC TTCACCGGCGGATCCTCGGTGGAAGTGGACGCCCCCGAAATCAACGTCACCAACGTTGACCTAGTCGAAGCAATGCGCCC GTCCGTCATCCACGTGATGGGTGACGCCCAAGAATGCAGCCGCCGACTCATGGGTTCTGGCTTTGTGGCATCCCCCGACT ACGTTGTGACCAACGCCCACGTTGTTGCAGGTACCTCCACCGTCAGCCTGGATACCATGATCGGAACCCGCTCCGCAGAG GTAGTGTTCTACGACCCGAACCTGGACATCGCAGTCCTTTACAGCCCTGACCTCGGCTTGGATCCACTGCCGTGGGCATC CACTCCGCTAGACACTGGCGATGAAGCAATCGTCATGGGATTCCCACAGTCCGGACCTTTCAACGCCTCCCCAGCCAGGG TCCGCGAACGCATCATGATCACCGGCAGCAACATTTACGCCAACGGCCAGCACGAACGCGAAGCCTATTCAGTCCGCGGA TCCATCCAATCTGGAAACTCCGGCGGCCCAATGACCAACGAAATGGGTGAAGTGGTTGGTGTTGTCTTCGGCGCAGCGAT CGACGGCTCCGATACCGGTTACGTTCTCACTGCCGAAGAGGTACAGGAGCGGATCGGCGACATCACCGCGCTGACTCAGC CTGTCGATACGATGCAGTGCGCGGTTTCTTAG
Upstream 100 bases:
>100_bases CTAAAAATTTGGCAGTTAATATTATCGATTTTCGAAAGCGTAGAACACCAAACCATTGTTGAGCCCCAGCCTGGTCGTCG ATGCCGTCATCGTCCTCGTT
Downstream 100 bases:
>100_bases TCGTCGGGAGCTAGGACCAGACAGGGATGCCCACGATTGCGGTTTTTCCGTTGCGTGGGCAGTGTGGTTTGGTTTTGGGG GCTCGGAACCGGTCACAGAT
Product: serine protease, membrane protein
Products: NA
Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Trypsin-Like Serine Protease; Protease; Peptidase; Serine Peptidase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; 2-Alkenal Reductase; Serine Proteinase; S1C Family Peptidase
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFR SSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISP FTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAE VVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNIYANGQHEREAYSVRG SIQSGNSGGPMTNEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITALTQPVDTMQCAVS
Sequences:
>Translated_383_residues MAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFR SSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISP FTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAE VVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNIYANGQHEREAYSVRG SIQSGNSGGPMTNEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITALTQPVDTMQCAVS >Mature_382_residues AFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFRS SRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPF TGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAEV VFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNIYANGQHEREAYSVRGS IQSGNSGGPMTNEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITALTQPVDTMQCAVS
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39828; Mature: 39697
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVG CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHH LGNLIGAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASG HHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC IRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVD CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEECCCCH LVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAE HHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCEEEEEHHCCCCCCE VVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMI EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHEEEEE TGSNIYANGQHEREAYSVRGSIQSGNSGGPMTNEMGEVVGVVFGAAIDGSDTGYVLTAEE ECCCEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEHHH VQERIGDITALTQPVDTMQCAVS HHHHHCCHHHHCCCHHHHHHHCC >Mature Secondary Structure AFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHH LGNLIGAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASG HHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC IRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVD CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEECCCCH LVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAE HHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCEEEEEHHCCCCCCE VVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMI EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHEEEEE TGSNIYANGQHEREAYSVRGSIQSGNSGGPMTNEMGEVVGVVFGAAIDGSDTGYVLTAEE ECCCEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEHHH VQERIGDITALTQPVDTMQCAVS HHHHHCCHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA