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The map label for this gene is nudL [H]

Identifier: 62389192

GI number: 62389192

Start: 309262

End: 310041

Strand: Direct

Name: nudL [H]

Synonym: cg0355

Alternate gene names: 62389192

Gene position: 309262-310041 (Clockwise)

Preceding gene: 62389191

Following gene: 62389193

Centisome position: 9.42

GC content: 60.64

Gene sequence:

>780_bases
ATGACCTCGAAACCGCTGTGGCAGGGGCGCTGCAGAATGCGTAACTACCCTGATTTACCGCATGATTTCCCAGGTCAAAA
CACAGAGCTCACCCCCGCAAAGGCACCCGTGTGGATGCACCGACTCTTAGACCGCATCCACACCGGCCGCATGGCCAACC
CGCTGGACGGTGCGGAAACGCTCGGCGACACAGACTCCGAAAAGCGCGCTGCCGTGCTCATGCTATTTTCTGGCTCGGAA
ACCTCCTTTGACCTGCCCAATGACGCCTCCGTGCTGCTGACGCACCGCACCCCGACGATGCGTTCCCATGCAGGTCAGAT
TGCCTTTCCCGGTGGCCGAATCGACCCCACCGATACTAACGCCGTGGACTGCGCCTTCCGCGAGGCCTGGGAAGAAACCG
GGCTGGATCGCCGCACCGCAACCCCATTAGCCCAGCTCAACGAGGTGCACATCCGTGCCACCGGATACCCCGTCTACCCA
ATCCTTGGACACTGGCACACCCCATCACCCGTCGCCGTGGCCAGCCCACACGAAACCGACGAAGTTTTCGACGCCCCACT
CTACGACCTCATCGACCCCAAAAACCGCCTCATGGTCGGCTGGCGCGAATGGCACGGACCAGCGTTTCGAATCAACGACT
ACATCATCTGGGGATTCACCGGCGGACTACTCTCCGCGATCCTCGACACCGCCGGCTGGGCCACCGAATGGGACACCGAC
CGCATCTTCGACCTGGAAAATACATTGTCAACATCTCGCAACAATGAGCGTATGCGTTAG

Upstream 100 bases:

>100_bases
GCAGGCACCCTTGGGCTGCCGGGCGTCGTGCCGATCACCATCGTGGTTTCTCCAGACGGCAATGTAGTGGACACCTTCCC
GCAGCCTTTCGAAACCATCG

Downstream 100 bases:

>100_bases
GCTGACGGGCTCCGGTGGCCTAAAATCGAAGCGATCTAAAAATTTGGCAGTTAATATTATCGATTTTCGAAAGCGTAGAA
CACCAAACCATTGTTGAGCC

Product: pyrophosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTSKPLWQGRCRMRNYPDLPHDFPGQNTELTPAKAPVWMHRLLDRIHTGRMANPLDGAETLGDTDSEKRAAVLMLFSGSE
TSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDPTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYP
ILGHWHTPSPVAVASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTD
RIFDLENTLSTSRNNERMR

Sequences:

>Translated_259_residues
MTSKPLWQGRCRMRNYPDLPHDFPGQNTELTPAKAPVWMHRLLDRIHTGRMANPLDGAETLGDTDSEKRAAVLMLFSGSE
TSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDPTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYP
ILGHWHTPSPVAVASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTD
RIFDLENTLSTSRNNERMR
>Mature_258_residues
TSKPLWQGRCRMRNYPDLPHDFPGQNTELTPAKAPVWMHRLLDRIHTGRMANPLDGAETLGDTDSEKRAAVLMLFSGSET
SFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDPTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPI
LGHWHTPSPVAVASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDR
IFDLENTLSTSRNNERMR

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=158, Percent_Identity=29.746835443038, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI18859683, Length=172, Percent_Identity=32.5581395348837, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 29203; Mature: 29072

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKPLWQGRCRMRNYPDLPHDFPGQNTELTPAKAPVWMHRLLDRIHTGRMANPLDGAET
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LGDTDSEKRAAVLMLFSGSETSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDPTDTN
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCCCCCCCCCCC
AVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVAVASPHETD
HHHHHHHHHHHHCCCCCHHCCCHHHCCEEEEEECCCEECHHCCCCCCCCCEEEECCCCCH
EVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTD
HHHCCCHHHHCCCCCCEEEEEHHHCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCC
RIFDLENTLSTSRNNERMR
EEEECHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSKPLWQGRCRMRNYPDLPHDFPGQNTELTPAKAPVWMHRLLDRIHTGRMANPLDGAET
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LGDTDSEKRAAVLMLFSGSETSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDPTDTN
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCCCCCCCCCCC
AVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVAVASPHETD
HHHHHHHHHHHHCCCCCHHCCCHHHCCEEEEEECCCEECHHCCCCCCCCCEEEECCCCCH
EVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTD
HHHCCCHHHHCCCCCCEEEEEHHHCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCC
RIFDLENTLSTSRNNERMR
EEEECHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]