| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is gltX
Identifier: 62389134
GI number: 62389134
Start: 251953
End: 252834
Strand: Direct
Name: gltX
Synonym: cg0289
Alternate gene names: 62389134
Gene position: 251953-252834 (Clockwise)
Preceding gene: 62389133
Following gene: 62389138
Centisome position: 7.68
GC content: 60.09
Gene sequence:
>882_bases ATGGCAGGACGATACGCACCATCACCAAGCGGCGACCTTCACTTTGGCAACCTCCGCACAGCACTGCTGGCCTGGCTGTT CGCGCGCTCCGAAGGAAAAAAATTCCTCATGCGGGTCGAAGACATCGATGAACAACGCTCATCCAAGGAATCCGCCGAAA GCCAACTCGCAGACCTATCCGCCCTGGGTCTCGATTGGGATGGCGACGTCCTCTACCAATCCACACGCTACGACGCCTAC CGCGCAGCCCTTGAAAAACTAGACACCTACGAATGTTATTGCTCGCGCCGGGACATCCAAGAAGCCTCGCGGGCACCCCA TGTGGCTCCGGGAGTGTATCCGGGAACGTGTAGGGGATTGAAGGAGGAGGAACGCGTCGAAAAGCGTGCAACCTTGGCTG CGCAAAACCGGCACCCCGCCATCCGCCTGCGCGCGCAGGTAACCTCGTTTGATTTTCACGACCGACTTCGCGGCCCACAA ACTGGCCCCGTAGACGATTTCATTCTGCTCCGCGGCGGGCAGGAACCCGGATGGGCATACAACTTAGCTGTCGTCGTCGA CGATGCCTACCAAGGCGTTGACCAGGTAGTCCGCGGCGACGACCTACTCGATTCCGCCGCGCGCCAAGCCTACCTCGGCT CGCTGCTGGGCACCCCCGCGCCCGAATACATTCACGTGCCGCTCGTGCTCAACGCCCACGGCCAGCGCCTCGCCAAACGC GACGGGGCAGTGACGCTTAAAGAAATGCTTATCGACGCCCCCCTCCACACCATTTTCTCCCGCCTCGCATCATCGCTCGG CTACGAAGGGGTAAATTCCGCACCCCAATTGTTGGAAATTTTCGACCCCACAACCCTCAGCCGGGAGCCGTTTATTTACT GA
Upstream 100 bases:
>100_bases CACCCCTGAAAACCTCCTCAACTATCCCGGAGTGATCATCTCCACCGTTCAGGAGAACCCATCCGAAACATGGCGGCAAG TGAACATCTAATCTAGAAAC
Downstream 100 bases:
>100_bases GGCTCAGAGGGAGGGGTCATTCCATCTGGAGGAGTCATGCCGCCTGGTCCTCCTTGTCCACCGGGGCCTCCCTGGCCTCC ACTTGGCATGTTCATGGACT
Product: glutamyl-Q tRNA(Asp) synthetase
Products: AMP; diphosphate; L-glutamyl-tRNA(Glu)
Alternate protein names: Glu-Q-RSs
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAGRYAPSPSGDLHFGNLRTALLAWLFARSEGKKFLMRVEDIDEQRSSKESAESQLADLSALGLDWDGDVLYQSTRYDAY RAALEKLDTYECYCSRRDIQEASRAPHVAPGVYPGTCRGLKEEERVEKRATLAAQNRHPAIRLRAQVTSFDFHDRLRGPQ TGPVDDFILLRGGQEPGWAYNLAVVVDDAYQGVDQVVRGDDLLDSAARQAYLGSLLGTPAPEYIHVPLVLNAHGQRLAKR DGAVTLKEMLIDAPLHTIFSRLASSLGYEGVNSAPQLLEIFDPTTLSREPFIY
Sequences:
>Translated_293_residues MAGRYAPSPSGDLHFGNLRTALLAWLFARSEGKKFLMRVEDIDEQRSSKESAESQLADLSALGLDWDGDVLYQSTRYDAY RAALEKLDTYECYCSRRDIQEASRAPHVAPGVYPGTCRGLKEEERVEKRATLAAQNRHPAIRLRAQVTSFDFHDRLRGPQ TGPVDDFILLRGGQEPGWAYNLAVVVDDAYQGVDQVVRGDDLLDSAARQAYLGSLLGTPAPEYIHVPLVLNAHGQRLAKR DGAVTLKEMLIDAPLHTIFSRLASSLGYEGVNSAPQLLEIFDPTTLSREPFIY >Mature_292_residues AGRYAPSPSGDLHFGNLRTALLAWLFARSEGKKFLMRVEDIDEQRSSKESAESQLADLSALGLDWDGDVLYQSTRYDAYR AALEKLDTYECYCSRRDIQEASRAPHVAPGVYPGTCRGLKEEERVEKRATLAAQNRHPAIRLRAQVTSFDFHDRLRGPQT GPVDDFILLRGGQEPGWAYNLAVVVDDAYQGVDQVVRGDDLLDSAARQAYLGSLLGTPAPEYIHVPLVLNAHGQRLAKRD GAVTLKEMLIDAPLHTIFSRLASSLGYEGVNSAPQLLEIFDPTTLSREPFIY
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily
Homologues:
Organism=Homo sapiens, GI134288884, Length=314, Percent_Identity=31.5286624203822, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI226510925, Length=254, Percent_Identity=42.5196850393701, Blast_Score=177, Evalue=9e-46, Organism=Escherichia coli, GI1788743, Length=302, Percent_Identity=33.112582781457, Blast_Score=163, Evalue=1e-41, Organism=Caenorhabditis elegans, GI71993394, Length=254, Percent_Identity=29.1338582677165, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324540, Length=265, Percent_Identity=32.4528301886792, Blast_Score=125, Evalue=8e-30, Organism=Drosophila melanogaster, GI24665321, Length=266, Percent_Identity=32.7067669172932, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLUQ_CORGL (Q8NTR6)
Other databases:
- EMBL: BA000036 - EMBL: BX927148 - RefSeq: NP_599489.1 - RefSeq: YP_224536.1 - ProteinModelPortal: Q8NTR6 - SMR: Q8NTR6 - GeneID: 1021302 - GeneID: 3344120 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg0289 - KEGG: cgl:NCgl0233 - HOGENOM: HBG628189 - OMA: IIKRSDG - PhylomeDB: Q8NTR6 - ProtClustDB: PRK05710 - BioCyc: CGLU196627:CG0289-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_01428 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR03838
Pfam domain/function: PF00749 tRNA-synt_1c
EC number: 6.1.1.17
Molecular weight: Translated: 32552; Mature: 32421
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 40-40 BINDING 180-180 BINDING 198-198 BINDING 239-239
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRYAPSPSGDLHFGNLRTALLAWLFARSEGKKFLMRVEDIDEQRSSKESAESQLADLS CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLDWDGDVLYQSTRYDAYRAALEKLDTYECYCSRRDIQEASRAPHVAPGVYPGTCRGL HHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC KEEERVEKRATLAAQNRHPAIRLRAQVTSFDFHDRLRGPQTGPVDDFILLRGGQEPGWAY CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCCCCCCEE NLAVVVDDAYQGVDQVVRGDDLLDSAARQAYLGSLLGTPAPEYIHVPLVLNAHGQRLAKR EEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHC DGAVTLKEMLIDAPLHTIFSRLASSLGYEGVNSAPQLLEIFDPTTLSREPFIY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AGRYAPSPSGDLHFGNLRTALLAWLFARSEGKKFLMRVEDIDEQRSSKESAESQLADLS CCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLDWDGDVLYQSTRYDAYRAALEKLDTYECYCSRRDIQEASRAPHVAPGVYPGTCRGL HHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC KEEERVEKRATLAAQNRHPAIRLRAQVTSFDFHDRLRGPQTGPVDDFILLRGGQEPGWAY CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCCCCCCEE NLAVVVDDAYQGVDQVVRGDDLLDSAARQAYLGSLLGTPAPEYIHVPLVLNAHGQRLAKR EEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHC DGAVTLKEMLIDAPLHTIFSRLASSLGYEGVNSAPQLLEIFDPTTLSREPFIY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate; tRNA(Glu)
Specific reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626