| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62389133
Identifier: 62389133
GI number: 62389133
Start: 250504
End: 251943
Strand: Direct
Name: 62389133
Synonym: cg0288
Alternate gene names: NA
Gene position: 250504-251943 (Clockwise)
Preceding gene: 62389132
Following gene: 62389134
Centisome position: 7.63
GC content: 54.03
Gene sequence:
>1440_bases ATGCCTAGCTTATGGCGTGCTCGTCGCAGACTTTTGCTCATTGCCCTAGGTGTACTTGGTGTGCTGCAGGCACTGCTGGC GATCATGGTGTCGTTGAGCGTAGCCGCCATACTTGAGGGAAACCGAGCACTTGTTGGATTGCTGCTTGCTACCACGTTGG GTTTGGGGGTGGCGCAGTGGATTCAAAAAGTAGTGGCAGAAGATCTAGGCCAGCATTATGTGCATGAGGTGCGTCGTGAA TTGGTGGGTGCTGCGCTGGTGCCTGGAAATACGGCCTCGTTGGGCGTGACTGTCACCCGAGCCAGCAATGATCTCACCGC GGTGCGCAATTGGGTGGCTTTGGGCATTGTTCCGATGGTCACCGGGCTGCCGTTGATTGCGATTGTGCTGGTGGCGTTGT TTATCCAAGATCTCCGCACAGGCGTGGCTGTTACTGTGCCACTGCTCATGTGTGTAGCCGTGCTGCCGGTGGTGGCGCGG TGGACTTTGAAAAGAGCACGTGAACTACGCAAAAAACGTGGACGCATGGCTGCGCGGATCGCAGATTCTGTCATGGCTGG AGAATTACTGCACGCAACAGGAGCAATAGACCGTGAGCTCAATGCAGTCACCCGAGATTCCGACCGAGTGGTGATAGCTG CTGTAAGACGTTCCTGGGCCACCGGTTTTAGCCGCGCATTGATGGCCATGGCAGCCTCGCTTGGCACTGTCAGCATTGTG ATTTCTGGCCACCTGGAAGTAAGTGAGGTTGCGGGAATAATGATGCTTCTTGGCGTTCTTGCCACTCCAGTTGCAGAACT TGGCCGCGTGGTGGAATATCGCCAAAATTATAAAGCCGCGACACGCATCCTGATTCCACTTCTGCAACGAGGCTCAGAAT TTAAACACTCCCAACAAAAACTACCCGGGTTGCAAGCAACAGAAGGAATCCCCGGTGTCTATGTCAAAGGTATTTCCGCC CTTCCTGGAGAACGGATCTACCTCCACGGCTCTGCAGATGCGACGAGAAAATGGGTCACCTCGTTGTCTGCAATGGAGGA AGGCACAGATGTAATAGTCAACGGTCAAAGGCTTTCGCAGCTTCCTTTGAAACAACGACGCGCCCTCATCGGAATCGCCT CAGCACACCACCACTTAAGCCGTGGTTCAGTATCGCGCCTGGTTGGTTTGCGAGTGCCGGATGCCACCGTGGAAGAAATT GAGCAAGCACTGGAACAAGTTGGTCTGAACAACACCGGGAAACAACGCTTGAAAAACGGCGGACACCCCTGGAGTACTTC GCAGATCAACAAACTGAAAATTGCCAGCGCCACCCTTCGAACCCCACCGCTTTTGGTACTTGAAGGCATCACCCCTGAAA ACCTCCTCAACTATCCCGGAGTGATCATCTCCACCGTTCAGGAGAACCCATCCGAAACATGGCGGCAAGTGAACATCTAA
Upstream 100 bases:
>100_bases CCGCTGGCCACCGCGGAAGCTGCCGCTGTGCTTGAAGTTCCAGTGGTGCCCACTTTTGATCTCACCAACCCGGAGATCGT CACAGCGGTGCTAACGGATC
Downstream 100 bases:
>100_bases TCTAGAAACATGGCAGGACGATACGCACCATCACCAAGCGGCGACCTTCACTTTGGCAACCTCCGCACAGCACTGCTGGC CTGGCTGTTCGCGCGCTCCG
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: Multidrug ABC Transporter ATPase/Permease
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPSLWRARRRLLLIALGVLGVLQALLAIMVSLSVAAILEGNRALVGLLLATTLGLGVAQWIQKVVAEDLGQHYVHEVRRE LVGAALVPGNTASLGVTVTRASNDLTAVRNWVALGIVPMVTGLPLIAIVLVALFIQDLRTGVAVTVPLLMCVAVLPVVAR WTLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKHSQQKLPGLQATEGIPGVYVKGISA LPGERIYLHGSADATRKWVTSLSAMEEGTDVIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEI EQALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI
Sequences:
>Translated_479_residues MPSLWRARRRLLLIALGVLGVLQALLAIMVSLSVAAILEGNRALVGLLLATTLGLGVAQWIQKVVAEDLGQHYVHEVRRE LVGAALVPGNTASLGVTVTRASNDLTAVRNWVALGIVPMVTGLPLIAIVLVALFIQDLRTGVAVTVPLLMCVAVLPVVAR WTLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKHSQQKLPGLQATEGIPGVYVKGISA LPGERIYLHGSADATRKWVTSLSAMEEGTDVIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEI EQALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI >Mature_478_residues PSLWRARRRLLLIALGVLGVLQALLAIMVSLSVAAILEGNRALVGLLLATTLGLGVAQWIQKVVAEDLGQHYVHEVRREL VGAALVPGNTASLGVTVTRASNDLTAVRNWVALGIVPMVTGLPLIAIVLVALFIQDLRTGVAVTVPLLMCVAVLPVVARW TLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIVI SGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKHSQQKLPGLQATEGIPGVYVKGISAL PGERIYLHGSADATRKWVTSLSAMEEGTDVIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIE QALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI
Specific function: Unknown
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51552; Mature: 51421
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLWRARRRLLLIALGVLGVLQALLAIMVSLSVAAILEGNRALVGLLLATTLGLGVAQW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IQKVVAEDLGQHYVHEVRRELVGAALVPGNTASLGVTVTRASNDLTAVRNWVALGIVPMV HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH TGLPLIAIVLVALFIQDLRTGVAVTVPLLMCVAVLPVVARWTLKRARELRKKRGRMAARI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEE ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKHSQQK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LPGLQATEGIPGVYVKGISALPGERIYLHGSADATRKWVTSLSAMEEGTDVIVNGQRLSQ CCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCHHHHH LPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIEQALEQVGLNNTGKQRLKNG CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCC GHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI CCCCCCCCCCCEEEEHHHCCCCCEEEEECCCHHHHHCCCCCEEEECCCCHHHHHHCCCC >Mature Secondary Structure PSLWRARRRLLLIALGVLGVLQALLAIMVSLSVAAILEGNRALVGLLLATTLGLGVAQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IQKVVAEDLGQHYVHEVRRELVGAALVPGNTASLGVTVTRASNDLTAVRNWVALGIVPMV HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH TGLPLIAIVLVALFIQDLRTGVAVTVPLLMCVAVLPVVARWTLKRARELRKKRGRMAARI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEE ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKHSQQK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LPGLQATEGIPGVYVKGISALPGERIYLHGSADATRKWVTSLSAMEEGTDVIVNGQRLSQ CCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCHHHHH LPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIEQALEQVGLNNTGKQRLKNG CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCC GHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI CCCCCCCCCCCEEEEHHHCCCCCEEEEECCCHHHHHCCCCCEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA