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The map label for this gene is 62389092

Identifier: 62389092

GI number: 62389092

Start: 213665

End: 214111

Strand: Direct

Name: 62389092

Synonym: cg0243

Alternate gene names: NA

Gene position: 213665-214111 (Clockwise)

Preceding gene: 62389091

Following gene: 62389093

Centisome position: 6.51

GC content: 55.7

Gene sequence:

>447_bases
TTGTGTAACCTCGTGTCCGAAAATCTTGATGTTACGATCGTCCGACCAATGAGCCTGAAAACCCAAGCTTTCCGGTTCAT
CCTCACCGGTGGCCTCTCAGCCATCGTGGACCTCGGCCTGCTGTCACTTTTGCAGCTAGTGTTCGGCCTTCCCGTACCTG
TTGCCCGCACGATCTCCTTCATCGCCGGCACCACCACCGCCTACATGATCAACCGCCGGTGGACCTTCCAAGCAGAAAGC
TCCACCTCCAGGTTCCTTGCTGTGGTGGCCCTCTACGGCGTGACCTTCCTGATCAACATTGGACTGCAAACCCTCTGCTC
CGCATTGTTTGAGAATTGGGGCTGGAACGAAGCCGTCGCGATGGTGGTCGCCTTCGTGATCGCCCAAGGCACCGGAACGG
TCATCAACTTCATCGTCCAAAGAACCATCATTTTCCGAGTGAAGTAA

Upstream 100 bases:

>100_bases
CTCCCTGAAGATACTCGCGGAACTCGGTGGCTACGGCCCAGAGCGGCTTGCCCCCGTGGATCGCCTGGACATTTATAGGG
AGCTGCTGTGTTTCTAGGTA

Downstream 100 bases:

>100_bases
GGTACCCCTCATGAAGACCTTCAATCCCACCATGATTGCCGGACTCATCGGCGTACTCTACTTCGTGCTGCTCACCCTGA
TTTTCTCCATCCAAGACATG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MCNLVSENLDVTIVRPMSLKTQAFRFILTGGLSAIVDLGLLSLLQLVFGLPVPVARTISFIAGTTTAYMINRRWTFQAES
STSRFLAVVALYGVTFLINIGLQTLCSALFENWGWNEAVAMVVAFVIAQGTGTVINFIVQRTIIFRVK

Sequences:

>Translated_148_residues
MCNLVSENLDVTIVRPMSLKTQAFRFILTGGLSAIVDLGLLSLLQLVFGLPVPVARTISFIAGTTTAYMINRRWTFQAES
STSRFLAVVALYGVTFLINIGLQTLCSALFENWGWNEAVAMVVAFVIAQGTGTVINFIVQRTIIFRVK
>Mature_148_residues
MCNLVSENLDVTIVRPMSLKTQAFRFILTGGLSAIVDLGLLSLLQLVFGLPVPVARTISFIAGTTTAYMINRRWTFQAES
STSRFLAVVALYGVTFLINIGLQTLCSALFENWGWNEAVAMVVAFVIAQGTGTVINFIVQRTIIFRVK

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gtrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007267 [H]

Pfam domain/function: PF04138 GtrA [H]

EC number: NA

Molecular weight: Translated: 16252; Mature: 16252

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNLVSENLDVTIVRPMSLKTQAFRFILTGGLSAIVDLGLLSLLQLVFGLPVPVARTISF
CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IAGTTTAYMINRRWTFQAESSTSRFLAVVALYGVTFLINIGLQTLCSALFENWGWNEAVA
HHCCHHHEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MVVAFVIAQGTGTVINFIVQRTIIFRVK
HHHHHHHHCCCHHHHHHHHHHHHHEEEC
>Mature Secondary Structure
MCNLVSENLDVTIVRPMSLKTQAFRFILTGGLSAIVDLGLLSLLQLVFGLPVPVARTISF
CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IAGTTTAYMINRRWTFQAESSTSRFLAVVALYGVTFLINIGLQTLCSALFENWGWNEAVA
HHCCHHHEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MVVAFVIAQGTGTVINFIVQRTIIFRVK
HHHHHHHHCCCHHHHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]