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The map label for this gene is tnp2f(ISCg2f) [H]

Identifier: 62389077

GI number: 62389077

Start: 192954

End: 194468

Strand: Direct

Name: tnp2f(ISCg2f) [H]

Synonym: cg0226

Alternate gene names: 62389077

Gene position: 192954-194468 (Clockwise)

Preceding gene: 62389075

Following gene: 62389079

Centisome position: 5.88

GC content: 52.67

Gene sequence:

>1515_bases
ATGTCAGGTCTTGCTGCGTCTACAGCGGTCGGGGTCAGTGAATTCACCGGGCGAAAGTGGGCGAAGGCCGCCGGGGTGAA
ACTGACCCGCGGCCCGCGAGGTGGCAATGCTTTTGACACCGCCGAGAAACTTGAGATTGCAGCCAGCATGCTAGAGAAAG
GATGCCTACCCCGAGAAATCGGCGAGTATGTCGGCATGACTCGGGCCAATATATCCCTATGGCGCAAACAAGGCCCAGAC
AAGCTTCGCCAACGCGCAGCCACCTTGCGCACCGGCAAGCGAGCAGCTGAATTCATCCACGCCCCGGTGATGGGCCCTTA
TTATGGGCCACGCACACTCCATCAAGTGTTGCGTGAGGACTACACAACACTGTTTGACGAGTTATCTGCGTTGGGGTTGC
CAGCACAGGTGTGTGGGGCCTTACTTCATCTTGCTCCACCACCATCATTACGCTTTTCTTATATGTCGTGTGTAGTGCCG
TTATTTGCTGATGAAATCAAAGTCGTAGGACAAGGCACACGATTATCGTTAGAAGAGAAAATGATGATCCAACGTTTCCA
TGACACCGGGGTCAGTGCAGCAGAAATCGGTCGACGCCTGGGTCGGTGTCGGCAAACAATTTCCAGGGAACTTCGACGTG
GTCAAGATGATGATGGACGTTATCGTGCACGCGACTCCTATGAAGGTGCGATCAGGAAACTAGCGCGTCCGAAAACACCG
AAACTTGATGCCAATCGTAGGCTTCGGGCTGTGGTGGTCGAGGCGTTGAATAATAAATTATCTCCGGAGCAGATTTCTGG
TCTTTTAGCCACCGAGCATGCTAACGATAGCTCTATGCAGATTAGTCATGAAACTATTTACCAGGCGTTATATGTTCAAG
GTAAAGGGGCGTTGCGTGATGAATTGAAGGTGGAGAAATTTCTTCGTACCGGTCGGAAGGGACGTAAACCGCAGTCGAAG
TTGCCATCGAGAGGTAAGCCGTGGGTGGAGGGTGCGTTGATTAGTCAACGCCCAGCAGAAGTTGCTGATCGTGCTGTGCC
TGGGCACTGGGAGGGCGATTTAGTAATTGGTGGTGAAAACCAAGCGACAGCGTTGGTGACGTTGGTGGAGCGCACGAGCC
GGTTGACGTTGATTAAGCGGTTGGGGGTTAATCATGAGGCGTCGACTGTGACGGATGCGTTGGTGGAGATGATGGGTGAT
TTGCCGCAGGCGTTGCGTCGGAGTTTGACGTGGGATCAGGGTGTGGAGATGGCAGAGCATGCGCGGTTTAGCGTGGTGAC
CAAGTGTCCGGTGTTTTTCTGTGATCCTCATTCGCCGTGGCAGCGTGGGTCGAATGAGAATACGAATGGATTGGTCAGGG
ATTTTTTCCCGAAGGGCACTAATTTTGCTAAAGTAAGTGACGAAGAAGTTCAGCGGGCACAGGATCTGCTGAATTACCGG
CCGCGGAAAATGCATGGTTTTAAAAGCGCGACGCAGGTATATGAAAAAATCGTAGTTGGTGCATCCACCGATTGA

Upstream 100 bases:

>100_bases
GTGAATGCACCACGAGCAACCCGAAGGGTGCGAAGTGGGCATTCGTAGAACAATCCCAGAGGAAAGCCGTACGGCTTTCC
TCGACATGATCAATCAAGGT

Downstream 100 bases:

>100_bases
ATTCGCCCTAGGTTGGATGCAAAAATCCACCACAAACATGTGGTCAGTCCACATGAATTGAACGAATTTTTGCATTTGGA
ACCGGCATGTCCCGATACCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MSGLAASTAVGVSEFTGRKWAKAAGVKLTRGPRGGNAFDTAEKLEIAASMLEKGCLPREIGEYVGMTRANISLWRKQGPD
KLRQRAATLRTGKRAAEFIHAPVMGPYYGPRTLHQVLREDYTTLFDELSALGLPAQVCGALLHLAPPPSLRFSYMSCVVP
LFADEIKVVGQGTRLSLEEKMMIQRFHDTGVSAAEIGRRLGRCRQTISRELRRGQDDDGRYRARDSYEGAIRKLARPKTP
KLDANRRLRAVVVEALNNKLSPEQISGLLATEHANDSSMQISHETIYQALYVQGKGALRDELKVEKFLRTGRKGRKPQSK
LPSRGKPWVEGALISQRPAEVADRAVPGHWEGDLVIGGENQATALVTLVERTSRLTLIKRLGVNHEASTVTDALVEMMGD
LPQALRRSLTWDQGVEMAEHARFSVVTKCPVFFCDPHSPWQRGSNENTNGLVRDFFPKGTNFAKVSDEEVQRAQDLLNYR
PRKMHGFKSATQVYEKIVVGASTD

Sequences:

>Translated_504_residues
MSGLAASTAVGVSEFTGRKWAKAAGVKLTRGPRGGNAFDTAEKLEIAASMLEKGCLPREIGEYVGMTRANISLWRKQGPD
KLRQRAATLRTGKRAAEFIHAPVMGPYYGPRTLHQVLREDYTTLFDELSALGLPAQVCGALLHLAPPPSLRFSYMSCVVP
LFADEIKVVGQGTRLSLEEKMMIQRFHDTGVSAAEIGRRLGRCRQTISRELRRGQDDDGRYRARDSYEGAIRKLARPKTP
KLDANRRLRAVVVEALNNKLSPEQISGLLATEHANDSSMQISHETIYQALYVQGKGALRDELKVEKFLRTGRKGRKPQSK
LPSRGKPWVEGALISQRPAEVADRAVPGHWEGDLVIGGENQATALVTLVERTSRLTLIKRLGVNHEASTVTDALVEMMGD
LPQALRRSLTWDQGVEMAEHARFSVVTKCPVFFCDPHSPWQRGSNENTNGLVRDFFPKGTNFAKVSDEEVQRAQDLLNYR
PRKMHGFKSATQVYEKIVVGASTD
>Mature_503_residues
SGLAASTAVGVSEFTGRKWAKAAGVKLTRGPRGGNAFDTAEKLEIAASMLEKGCLPREIGEYVGMTRANISLWRKQGPDK
LRQRAATLRTGKRAAEFIHAPVMGPYYGPRTLHQVLREDYTTLFDELSALGLPAQVCGALLHLAPPPSLRFSYMSCVVPL
FADEIKVVGQGTRLSLEEKMMIQRFHDTGVSAAEIGRRLGRCRQTISRELRRGQDDDGRYRARDSYEGAIRKLARPKTPK
LDANRRLRAVVVEALNNKLSPEQISGLLATEHANDSSMQISHETIYQALYVQGKGALRDELKVEKFLRTGRKGRKPQSKL
PSRGKPWVEGALISQRPAEVADRAVPGHWEGDLVIGGENQATALVTLVERTSRLTLIKRLGVNHEASTVTDALVEMMGDL
PQALRRSLTWDQGVEMAEHARFSVVTKCPVFFCDPHSPWQRGSNENTNGLVRDFFPKGTNFAKVSDEEVQRAQDLLNYRP
RKMHGFKSATQVYEKIVVGASTD

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=328, Percent_Identity=41.7682926829268, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1790736, Length=328, Percent_Identity=41.7682926829268, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1787671, Length=328, Percent_Identity=41.7682926829268, Blast_Score=218, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 55899; Mature: 55768

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGLAASTAVGVSEFTGRKWAKAAGVKLTRGPRGGNAFDTAEKLEIAASMLEKGCLPREI
CCCCHHHHHCHHHHCCCHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
GEYVGMTRANISLWRKQGPDKLRQRAATLRTGKRAAEFIHAPVMGPYYGPRTLHQVLRED
HHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
YTTLFDELSALGLPAQVCGALLHLAPPPSLRFSYMSCVVPLFADEIKVVGQGTRLSLEEK
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MMIQRFHDTGVSAAEIGRRLGRCRQTISRELRRGQDDDGRYRARDSYEGAIRKLARPKTP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
KLDANRRLRAVVVEALNNKLSPEQISGLLATEHANDSSMQISHETIYQALYVQGKGALRD
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
ELKVEKFLRTGRKGRKPQSKLPSRGKPWVEGALISQRPAEVADRAVPGHWEGDLVIGGEN
HHHHHHHHHCCCCCCCCHHHCCCCCCCCHHCHHHCCCCHHHHHCCCCCCCCCCEEECCCC
QATALVTLVERTSRLTLIKRLGVNHEASTVTDALVEMMGDLPQALRRSLTWDQGVEMAEH
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
ARFSVVTKCPVFFCDPHSPWQRGSNENTNGLVRDFFPKGTNFAKVSDEEVQRAQDLLNYR
HHHEEEEECCEEEECCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PRKMHGFKSATQVYEKIVVGASTD
CHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]