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The map label for this gene is ureF [H]

Identifier: 62388983

GI number: 62388983

Start: 94203

End: 94883

Strand: Direct

Name: ureF [H]

Synonym: cg0117

Alternate gene names: 62388983

Gene position: 94203-94883 (Clockwise)

Preceding gene: 62388982

Following gene: 62388984

Centisome position: 2.87

GC content: 51.54

Gene sequence:

>681_bases
ATGGATCTTGACGCTGATTTTCTGCTGTTGCATTTATCGGATTCAGCACTTCCAACGGGAGCGTTTGCGCACTCATTTGG
ATTTGAAACTTATATGGATGCAGAGCGAATCACCAATGCAGAGGAGTTCCAAGACTGGCTGAAAGTCCTGCTTAAGGTGC
AATTGACCAGCTCTGATGCTTTGGCAATGAGGATGTTTTACGCCACCCCGACGGTGTCTGAGCTGAAACGGCTGGATGAG
CGCCTTTTTGCTGGAACTCCGGCGAGAGAAATTCGGGAAGCTAATGCTCGAATGGGTACGCGCATGGCAGAGATCGTGGC
TGAAACCTACTCCGTGCCCCTGATTGTTGAGTATCTCGAATTGATTCAACATCGAGAGCTATCAGGGCACCCGGCTTTGG
CTTTGGCTCTTGCCACCCACAGCGCGGGGATTGATGTGGATCGAGCAATCCACGCTCACCTCACGGCAACGGTGAGTTCG
CTGATCCAAAATGCGGTTCGTGGCATCCCACTGGGGCAAATGGCAGGTCAGCGGGTGATGTTCGCCATGCGTGAGCATAT
CGGTGCGGCCGTGAAACGTAGCGCGAACTTGGATGAGATTGATTTCTGTTCGGGTGATCCAGGCTTGGATATTTCACAAA
TGGTTCATGAAACCCAACGCGCACGACTATTTATGAGTTAA

Upstream 100 bases:

>100_bases
ATCACACGGTGGTCAGCTTCTTGGATGAGCACGGCATCGAGTATCAGCGCACCGAACTTGTTCCGCCAATTCCTTTCAGG
CATAGCGGGCACACACATTG

Downstream 100 bases:

>100_bases
GAAGGAGAAAAGAAACATGGGTCCAATCAGAATCGGCGTAGGCGGGCCGGTCGGCGCCGGAAAAACGCAGCTGGTAGAGC
GGATTACGCGAGCGCTTATC

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTVSELKRLDE
RLFAGTPAREIREANARMGTRMAEIVAETYSVPLIVEYLELIQHRELSGHPALALALATHSAGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS

Sequences:

>Translated_226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTVSELKRLDE
RLFAGTPAREIREANARMGTRMAEIVAETYSVPLIVEYLELIQHRELSGHPALALALATHSAGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS
>Mature_226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTVSELKRLDE
RLFAGTPAREIREANARMGTRMAEIVAETYSVPLIVEYLELIQHRELSGHPALALALATHSAGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25000; Mature: 25000

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDA
CCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
LAMRMFYATPTVSELKRLDERLFAGTPAREIREANARMGTRMAEIVAETYSVPLIVEYLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LIQHRELSGHPALALALATHSAGIDVDRAIHAHLTATVSSLIQNAVRGIPLGQMAGQRVM
HHHHCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDA
CCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
LAMRMFYATPTVSELKRLDERLFAGTPAREIREANARMGTRMAEIVAETYSVPLIVEYLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LIQHRELSGHPALALALATHSAGIDVDRAIHAHLTATVSSLIQNAVRGIPLGQMAGQRVM
HHHHCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA