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The map label for this gene is viuB [H]

Identifier: 62388934

GI number: 62388934

Start: 38978

End: 39802

Strand: Direct

Name: viuB [H]

Synonym: cg0054

Alternate gene names: 62388934

Gene position: 38978-39802 (Clockwise)

Preceding gene: 62388933

Following gene: 62388946

Centisome position: 1.19

GC content: 53.58

Gene sequence:

>825_bases
ATGAAAGAAACCGACAACCTACTGCGCGAAAACTCCCACGACCGCGACATCTCTGAAATCGTCGCCACCATCACTGCCCT
TGACCACCCATCACCCTCACTTCTGCGATTCACAGCTTTTGTTCCAGGATCAGCAAACAACCCAGTGTGGGCAGAAGCCA
ACGTGGCAATCAGGCTTTACCTCAGCGAAGAATTCGACGACGCCACCCGCGTCTACACCGTCCGATCCTTTGATGCCGCA
ACTGAAAGCATCGTGGTGGATGTGGTTCAACACCACCACGAAAGCCCCATGATGCGCTGGTCAGACACCGTAAAAATCAA
CGACACCCTCGTGCTCACCGGACCCCGCCCACACTTTGTCATCCCCGAAGGCGAACAAGCAGCACTCTTCCTTGATGACA
CCGCCATCCCCGCTCTCGCCGCTATTTTGGATCAATGGCCAACAGATCTTCGTGGCAAAGGATGGGTTGTCACTGACGAT
CCCGCAGCCTTCGATGAACTACCCAGCATCGACGGACTGGAACTGAACCTGCTCGCGCCGGGATCAGATCCAACTGTTCA
GCCACTTGCCCAACAGGCATATGACCTGGAAAACCCAGAAACTTACGTGGTGTGGGCAGCCGGCGAGCGAGATGAAATAA
AATCCATCCGCAGGCACTTCCGCAAGCAGGTGGGATTGGAAAAAGATGCAGTGGCCGTGTTTGGGTACTGGAAATACAAC
ACCACCAACACTCAGATCGATGCAGTCCGCAAAGAAAACTACATGAAGATGCTCTCTGAAGGGCTACAGCTGGAAAACTT
CGACGACCTCTCATTGGAGATTTAA

Upstream 100 bases:

>100_bases
CTAAAGCGCTGCTCAAAGAAGTTTTTGACCTCGACGCACTCATCCTCAAAGACCCCAACAACGGCCGACCACTCATCGTG
CCCACAGACAGGAGAAACTC

Downstream 100 bases:

>100_bases
GGGGTCGAGTTTTTAGAATGGGTGTTTGCATTGATTGGCGTCTGATGAGCTCTTAGAAGCGATTCTGGGAGGGCATGATT
TTTGGGATTCGGAGCTGAAT

Product: iron-chelator utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKETDNLLRENSHDRDISEIVATITALDHPSPSLLRFTAFVPGSANNPVWAEANVAIRLYLSEEFDDATRVYTVRSFDAA
TESIVVDVVQHHHESPMMRWSDTVKINDTLVLTGPRPHFVIPEGEQAALFLDDTAIPALAAILDQWPTDLRGKGWVVTDD
PAAFDELPSIDGLELNLLAPGSDPTVQPLAQQAYDLENPETYVVWAAGERDEIKSIRRHFRKQVGLEKDAVAVFGYWKYN
TTNTQIDAVRKENYMKMLSEGLQLENFDDLSLEI

Sequences:

>Translated_274_residues
MKETDNLLRENSHDRDISEIVATITALDHPSPSLLRFTAFVPGSANNPVWAEANVAIRLYLSEEFDDATRVYTVRSFDAA
TESIVVDVVQHHHESPMMRWSDTVKINDTLVLTGPRPHFVIPEGEQAALFLDDTAIPALAAILDQWPTDLRGKGWVVTDD
PAAFDELPSIDGLELNLLAPGSDPTVQPLAQQAYDLENPETYVVWAAGERDEIKSIRRHFRKQVGLEKDAVAVFGYWKYN
TTNTQIDAVRKENYMKMLSEGLQLENFDDLSLEI
>Mature_274_residues
MKETDNLLRENSHDRDISEIVATITALDHPSPSLLRFTAFVPGSANNPVWAEANVAIRLYLSEEFDDATRVYTVRSFDAA
TESIVVDVVQHHHESPMMRWSDTVKINDTLVLTGPRPHFVIPEGEQAALFLDDTAIPALAAILDQWPTDLRGKGWVVTDD
PAAFDELPSIDGLELNLLAPGSDPTVQPLAQQAYDLENPETYVVWAAGERDEIKSIRRHFRKQVGLEKDAVAVFGYWKYN
TTNTQIDAVRKENYMKMLSEGLQLENFDDLSLEI

Specific function: Involved in intracellular removal of iron from iron- vulnibactin complex. Vulnibactin is a iron-chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30793; Mature: 30793

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETDNLLRENSHDRDISEIVATITALDHPSPSLLRFTAFVPGSANNPVWAEANVAIRLY
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEE
LSEEFDDATRVYTVRSFDAATESIVVDVVQHHHESPMMRWSDTVKINDTLVLTGPRPHFV
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEECCCEEEECCEEEEECCCCCEE
IPEGEQAALFLDDTAIPALAAILDQWPTDLRGKGWVVTDDPAAFDELPSIDGLELNLLAP
ECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECC
GSDPTVQPLAQQAYDLENPETYVVWAAGERDEIKSIRRHFRKQVGLEKDAVAVFGYWKYN
CCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
TTNTQIDAVRKENYMKMLSEGLQLENFDDLSLEI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure
MKETDNLLRENSHDRDISEIVATITALDHPSPSLLRFTAFVPGSANNPVWAEANVAIRLY
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEE
LSEEFDDATRVYTVRSFDAATESIVVDVVQHHHESPMMRWSDTVKINDTLVLTGPRPHFV
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEECCCEEEECCEEEEECCCCCEE
IPEGEQAALFLDDTAIPALAAILDQWPTDLRGKGWVVTDDPAAFDELPSIDGLELNLLAP
ECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECC
GSDPTVQPLAQQAYDLENPETYVVWAAGERDEIKSIRRHFRKQVGLEKDAVAVFGYWKYN
CCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
TTNTQIDAVRKENYMKMLSEGLQLENFDDLSLEI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8698519 [H]