Click here to switch to the map view.

The map label for this gene is 59714321

Identifier: 59714321

GI number: 59714321

Start: 1282721

End: 1283296

Strand: Reverse

Name: 59714321

Synonym: VF_A1138

Alternate gene names: NA

Gene position: 1283296-1282721 (Counterclockwise)

Preceding gene: 59714322

Following gene: 59714320

Centisome position: 96.46

GC content: 24.31

Gene sequence:

>576_bases
TTGAGTGAAGATAAATACGAAAAAGGTATATATTTTAGTTTGAATCACTTTTTAATGATTTTTTTTGTTTTTATTTTATG
TGCATTTTTTTTGAAAGATTATTATTTATTTAAATGGGATGTGTTAGGGAGCAGAGATTTTACGGAAATCCTAAATAAAG
GAATGGAAAATAAAAAGGCGTTAAGTAGAGGTCTTAGAAATAATAATCCTTTAAATATTAGGAACTCCTTTTCTAATAAA
TGGCTTGGAGAGGTAAAAATAAGTCAAAAAAAAGACAGTGATTTTGAAGAGTTTATTAATATTCGTTATGGCTTTAGAGC
AGCTTACAAAGTATTAATGACTTATAGAACAGAATATAACATAAAAACAATTGACGGGATTATTAGGAAATTTTCACCAA
CTAATGAAAACAATACAGAAGAAATAATTATTAAGTTATCTAATATGACAGGGATAGAAAAACATAAAGTAATTAGTGGT
TATGATTACATTAATCTTATTCATAAAATGACAATTATTGAATCTGGATATAAATTCCCAATTTCATTAATTGAAGAAAG
TATATTAATTAAATAA

Upstream 100 bases:

>100_bases
TTTAGATGTTTTATCTTATTTGTTGATTGTTTTTTCCTATTAAGGAATTTAATAACTATTAGAATAAGTCTTAATTATTA
CGAATAGAGGTGTGATTATA

Downstream 100 bases:

>100_bases
TGCAGTTATATATAAAAATAGTTTTCATGACTTAATACATAGATGATTTTATTTATTAAGTTTAAATAAATCAGAGGTAA
AAGTAATGTCAGATCAAACA

Product: structural protein P5

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSEDKYEKGIYFSLNHFLMIFFVFILCAFFLKDYYLFKWDVLGSRDFTEILNKGMENKKALSRGLRNNNPLNIRNSFSNK
WLGEVKISQKKDSDFEEFINIRYGFRAAYKVLMTYRTEYNIKTIDGIIRKFSPTNENNTEEIIIKLSNMTGIEKHKVISG
YDYINLIHKMTIIESGYKFPISLIEESILIK

Sequences:

>Translated_191_residues
MSEDKYEKGIYFSLNHFLMIFFVFILCAFFLKDYYLFKWDVLGSRDFTEILNKGMENKKALSRGLRNNNPLNIRNSFSNK
WLGEVKISQKKDSDFEEFINIRYGFRAAYKVLMTYRTEYNIKTIDGIIRKFSPTNENNTEEIIIKLSNMTGIEKHKVISG
YDYINLIHKMTIIESGYKFPISLIEESILIK
>Mature_190_residues
SEDKYEKGIYFSLNHFLMIFFVFILCAFFLKDYYLFKWDVLGSRDFTEILNKGMENKKALSRGLRNNNPLNIRNSFSNKW
LGEVKISQKKDSDFEEFINIRYGFRAAYKVLMTYRTEYNIKTIDGIIRKFSPTNENNTEEIIIKLSNMTGIEKHKVISGY
DYINLIHKMTIIESGYKFPISLIEESILIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22629; Mature: 22497

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKYEKGIYFSLNHFLMIFFVFILCAFFLKDYYLFKWDVLGSRDFTEILNKGMENKKA
CCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCHHHH
LSRGLRNNNPLNIRNSFSNKWLGEVKISQKKDSDFEEFINIRYGFRAAYKVLMTYRTEYN
HHHHCCCCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IKTIDGIIRKFSPTNENNTEEIIIKLSNMTGIEKHKVISGYDYINLIHKMTIIESGYKFP
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHEECCHHHHHHHHHHHHHHCCCCCC
ISLIEESILIK
HHHHHHHHCCC
>Mature Secondary Structure 
SEDKYEKGIYFSLNHFLMIFFVFILCAFFLKDYYLFKWDVLGSRDFTEILNKGMENKKA
CCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCHHHH
LSRGLRNNNPLNIRNSFSNKWLGEVKISQKKDSDFEEFINIRYGFRAAYKVLMTYRTEYN
HHHHCCCCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IKTIDGIIRKFSPTNENNTEEIIIKLSNMTGIEKHKVISGYDYINLIHKMTIIESGYKFP
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHEECCHHHHHHHHHHHHHHCCCCCC
ISLIEESILIK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA