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The map label for this gene is 59714301

Identifier: 59714301

GI number: 59714301

Start: 1257892

End: 1258584

Strand: Reverse

Name: 59714301

Synonym: VF_A1118

Alternate gene names: NA

Gene position: 1258584-1257892 (Counterclockwise)

Preceding gene: 59714302

Following gene: 59714300

Centisome position: 94.61

GC content: 40.84

Gene sequence:

>693_bases
ATGCAATACGCATCTGAAATTCAAACCATGTGCCCTATTCAAAGAGGCGATCTTCACCCATCAGCACCAATTCCTGTTGA
AGGAAGAATGATTAATCCAAAAGAAGTAATAGCGATTTCTGGATTAAGTCATGGCGTAGGTGCTTGTGCTCCTCAGCAAG
GGGCTGCCAAATTAACTTTAAATGTGAAAGAAGGCATTATTGAAGAAGCACTGATCGAAACGATTGGCTGTTCTGGCATG
ACACATTCTGCAGCAATGGCTGCTGAGATCCTGACAGGAAAAACCATTTTAGAAGCAATGAATACGGATTTGGTATGCGA
TGCAATCAATGTTGCGATGCGTGAAATATTCCTTCAATTTGCTTATGGTCGAACTCAATCTGCTTTCTCTGAAGGTGGTT
TAGAGGTTGGAGCTGCATTAGAAGATTTAGGTAAAACCAAACGAAGCCAAGTTGGTACGAGTTATTCAACTAATGCAAAA
GGTGTGCGTTATATGGAATTAGCCGAAGGATACGTAACTCGCTTAGGTCTTGATGAAGACAGTGAAGTGATTGGTTATGA
GTATTTGAATCTTGGCAAAATGATGGCTGATATTGGAAAAGGTATTTCTGCTGACGAAGCGTTAAAAGGTGCTAAGGGTA
CTTATGGACGCTTTTCTGAAGCAGTAAAAACTGTCGATCCACGTCAAGAATAA

Upstream 100 bases:

>100_bases
ATCTATATAGTTACTTATCTAGATTGAGATTGCTGTTCGCTCTTGGTCTGTAGGTCATATACCCTCCTACACCTGTTTTC
CTTACCAATGGGAAAACATT

Downstream 100 bases:

>100_bases
TTGAGGCCATCATTATGAATACAAATATCCAAACATTACTTGAAGAAATGAACTTCTCAACACTTGAGCAAGCATATGAT
TATTGCCTTGAAGCTGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NifU-Like Domain Containing Protein; NifU-Related Domain Containing Protein; NifU Domain-Containing Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQYASEIQTMCPIQRGDLHPSAPIPVEGRMINPKEVIAISGLSHGVGACAPQQGAAKLTLNVKEGIIEEALIETIGCSGM
THSAAMAAEILTGKTILEAMNTDLVCDAINVAMREIFLQFAYGRTQSAFSEGGLEVGAALEDLGKTKRSQVGTSYSTNAK
GVRYMELAEGYVTRLGLDEDSEVIGYEYLNLGKMMADIGKGISADEALKGAKGTYGRFSEAVKTVDPRQE

Sequences:

>Translated_230_residues
MQYASEIQTMCPIQRGDLHPSAPIPVEGRMINPKEVIAISGLSHGVGACAPQQGAAKLTLNVKEGIIEEALIETIGCSGM
THSAAMAAEILTGKTILEAMNTDLVCDAINVAMREIFLQFAYGRTQSAFSEGGLEVGAALEDLGKTKRSQVGTSYSTNAK
GVRYMELAEGYVTRLGLDEDSEVIGYEYLNLGKMMADIGKGISADEALKGAKGTYGRFSEAVKTVDPRQE
>Mature_230_residues
MQYASEIQTMCPIQRGDLHPSAPIPVEGRMINPKEVIAISGLSHGVGACAPQQGAAKLTLNVKEGIIEEALIETIGCSGM
THSAAMAAEILTGKTILEAMNTDLVCDAINVAMREIFLQFAYGRTQSAFSEGGLEVGAALEDLGKTKRSQVGTSYSTNAK
GVRYMELAEGYVTRLGLDEDSEVIGYEYLNLGKMMADIGKGISADEALKGAKGTYGRFSEAVKTVDPRQE

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24472; Mature: 24472

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYASEIQTMCPIQRGDLHPSAPIPVEGRMINPKEVIAISGLSHGVGACAPQQGAAKLTL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHEEEECCCCCCCCCCCCCCCCEEEEE
NVKEGIIEEALIETIGCSGMTHSAAMAAEILTGKTILEAMNTDLVCDAINVAMREIFLQF
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AYGRTQSAFSEGGLEVGAALEDLGKTKRSQVGTSYSTNAKGVRYMELAEGYVTRLGLDED
HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
SEVIGYEYLNLGKMMADIGKGISADEALKGAKGTYGRFSEAVKTVDPRQE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQYASEIQTMCPIQRGDLHPSAPIPVEGRMINPKEVIAISGLSHGVGACAPQQGAAKLTL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHEEEECCCCCCCCCCCCCCCCEEEEE
NVKEGIIEEALIETIGCSGMTHSAAMAAEILTGKTILEAMNTDLVCDAINVAMREIFLQF
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AYGRTQSAFSEGGLEVGAALEDLGKTKRSQVGTSYSTNAKGVRYMELAEGYVTRLGLDED
HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
SEVIGYEYLNLGKMMADIGKGISADEALKGAKGTYGRFSEAVKTVDPRQE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA