| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714300
Identifier: 59714300
GI number: 59714300
Start: 1256903
End: 1257877
Strand: Reverse
Name: 59714300
Synonym: VF_A1117
Alternate gene names: NA
Gene position: 1257877-1256903 (Counterclockwise)
Preceding gene: 59714301
Following gene: 59714297
Centisome position: 94.55
GC content: 41.03
Gene sequence:
>975_bases ATGAATACAAATATCCAAACATTACTTGAAGAAATGAACTTCTCAACACTTGAGCAAGCATATGATTATTGCCTTGAAGC TGGGATCGATCCTAAGAAATTGGTATTAGATACTCAGCCGATTGCTTTTGATAATGCGTGTGATGCTTATACTTTAGGCT CTGCTTTAGCACTATTTCGAAAAGCAAACAGTGCGGTAACCGCTGCAACTATGATTGGTGAAGGGCTACAAGCATTTTGT AAAAAAGGGAGTGTTGCTGAGCAGCGTCAAGTTGGACTTGGTCATGGTGCATTAGCAGCTCGTTTATTATCGGAAGAAAC TCAGTGCTTTGCATTTTTAGCTGGTCATGAGTCTTTTGCTGCTGCTGAAGGGGCGATTAAAATTGCATTAAATGCAAATA AATCACGTCAAACACCATTAAGAGTGGTATTAAATGGTTTAGGTAAAGATGCCGCTTATCTTATCTCGCGTATTAATGGT TTTACTTATGTAAGAACAGAATTTAATTATCAAACCGGTGAATTGGTTGAAGTAAGTAGAAAGCGTTTTTCGCAAACAGA GCGTGGGGATATTTTATGTTATGGTGCGGATGATGTTCGTGAAGGCACCGCTATTATGCATGCTGCAAATGTGGATGTGA GCATTACGGGGAATTCAACGAACCCTACACGTTTTCAGCACCCTGTTGCTGGCATTTATAAACAAGAACGTTTATCTCAA GGAAAACCGTACTTCTCTGTGGCCTCTGGTGGTGGTACAGGACGAACTTTACACCCTGATAATGTAGCAGCTGGTCCTGC ATCTTACGGTATGACAGATACCATGGGAAGAATGCATGCAGATGCACAATTTGCTGGAAGTTCATCTGTACCTGCACATG TTGCGATGATGGGTTTTATTGGAATGGGGAATAACCCAATGGTTGGAGCATCAGTAGCACTGGCAGTAGAGATTGATCAA CGTTTAAATCGTTAA
Upstream 100 bases:
>100_bases CTGCTGACGAAGCGTTAAAAGGTGCTAAGGGTACTTATGGACGCTTTTCTGAAGCAGTAAAAACTGTCGATCCACGTCAA GAATAATTGAGGCCATCATT
Downstream 100 bases:
>100_bases TCTCTTTTGAAGAAAATAAGTAAATGCTGATGGAGTGATAAAAAAGGGCTGAAGATACAATATCTTCAGCCCTTTTTTGA TTTTAGACTAATATTAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNTNIQTLLEEMNFSTLEQAYDYCLEAGIDPKKLVLDTQPIAFDNACDAYTLGSALALFRKANSAVTAATMIGEGLQAFC KKGSVAEQRQVGLGHGALAARLLSEETQCFAFLAGHESFAAAEGAIKIALNANKSRQTPLRVVLNGLGKDAAYLISRING FTYVRTEFNYQTGELVEVSRKRFSQTERGDILCYGADDVREGTAIMHAANVDVSITGNSTNPTRFQHPVAGIYKQERLSQ GKPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGASVALAVEIDQ RLNR
Sequences:
>Translated_324_residues MNTNIQTLLEEMNFSTLEQAYDYCLEAGIDPKKLVLDTQPIAFDNACDAYTLGSALALFRKANSAVTAATMIGEGLQAFC KKGSVAEQRQVGLGHGALAARLLSEETQCFAFLAGHESFAAAEGAIKIALNANKSRQTPLRVVLNGLGKDAAYLISRING FTYVRTEFNYQTGELVEVSRKRFSQTERGDILCYGADDVREGTAIMHAANVDVSITGNSTNPTRFQHPVAGIYKQERLSQ GKPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGASVALAVEIDQ RLNR >Mature_324_residues MNTNIQTLLEEMNFSTLEQAYDYCLEAGIDPKKLVLDTQPIAFDNACDAYTLGSALALFRKANSAVTAATMIGEGLQAFC KKGSVAEQRQVGLGHGALAARLLSEETQCFAFLAGHESFAAAEGAIKIALNANKSRQTPLRVVLNGLGKDAAYLISRING FTYVRTEFNYQTGELVEVSRKRFSQTERGDILCYGADDVREGTAIMHAANVDVSITGNSTNPTRFQHPVAGIYKQERLSQ GKPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGASVALAVEIDQ RLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34589; Mature: 34589
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNIQTLLEEMNFSTLEQAYDYCLEAGIDPKKLVLDTQPIAFDNACDAYTLGSALALFR CCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH KANSAVTAATMIGEGLQAFCKKGSVAEQRQVGLGHGALAARLLSEETQCFAFLAGHESFA HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCHHEEEEEECCCHHH AAEGAIKIALNANKSRQTPLRVVLNGLGKDAAYLISRINGFTYVRTEFNYQTGELVEVSR HCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH KRFSQTERGDILCYGADDVREGTAIMHAANVDVSITGNSTNPTRFQHPVAGIYKQERLSQ HHHCCCCCCCEEEECCCCCCCCCEEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHC GKPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFI CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHE GMGNNPMVGASVALAVEIDQRLNR ECCCCCCCCCEEEEEEEEHHHHCC >Mature Secondary Structure MNTNIQTLLEEMNFSTLEQAYDYCLEAGIDPKKLVLDTQPIAFDNACDAYTLGSALALFR CCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH KANSAVTAATMIGEGLQAFCKKGSVAEQRQVGLGHGALAARLLSEETQCFAFLAGHESFA HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCHHEEEEEECCCHHH AAEGAIKIALNANKSRQTPLRVVLNGLGKDAAYLISRINGFTYVRTEFNYQTGELVEVSR HCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH KRFSQTERGDILCYGADDVREGTAIMHAANVDVSITGNSTNPTRFQHPVAGIYKQERLSQ HHHCCCCCCCEEEECCCCCCCCCEEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHC GKPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFI CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHE GMGNNPMVGASVALAVEIDQRLNR ECCCCCCCCCEEEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA