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The map label for this gene is ybaR [H]

Identifier: 59714235

GI number: 59714235

Start: 1186674

End: 1188161

Strand: Reverse

Name: ybaR [H]

Synonym: VF_A1052

Alternate gene names: 59714235

Gene position: 1188161-1186674 (Counterclockwise)

Preceding gene: 59714237

Following gene: 59714234

Centisome position: 89.31

GC content: 39.72

Gene sequence:

>1488_bases
ATGTTTAAAAATTTCAAAATTGACTGGATGTCTAATATCCGTGGTGATCTCCTTGCGGGTATCGTTGTTGCTCTTGCTTT
AATCCCTGAAGCAATCGCTTTTTCTATTATTGCAGGTGTTGATCCAAAAGTTGGCTTGTATGCCTCGTTCAGTATCTCTG
TTGTTATTGCGTTTGCTGGAGGTCGCTCTGGGATGATCTCCGCAGCAACAGGAGCAATGGCTTTATTAATGGTTACTTTA
GTAAAAGAACACGGATTGGAGTATTTGCTTGCTGCTACAGTGTTGACTGGAGTATTTCAAATATTAGCAGGTTACTTAAA
GTTAGGTAGCTTGATGCGTTTTGTATCACGATCTGTTGTTACTGGGTTTGTAAATGCGTTAGCTATATTAATCTTTATGG
CACAATTACCCGAATTAACTGATGTGACATGGCATGTATATGCGATGACTGTTGCTGGTTTAGGGATTATCTATTTGTTC
CCATACCTCCCAGTGATCGGGAAATTAATACCTTCTCCTTTAGTGTGTATTATCGCATTAACCATTATTAGTATTTGGTT
TGGAATCGATGTTCGCACTGTAGGCGATATGGGACATCTGCCTGATACATTGCCGATTTTCCTTTGGCCTGATGTGCCTT
TAAACCTAAATACTTTATTGATTGTATTGCCATACTCACTTGGCCTAGCGGTGGTGGGGCTACTAGAGTCAATGATGACA
GCGACGATTGTTGATGATTTAACAGATACAAGCAGCGATAAGAACCGAGAGTGCAAAGGTCAAGGTATTGCTAATATCTT
TACGGGGTTTCTTGGTGGTATGGCAGGTTGTGCGATGATCGGACAATCAATGATTAATATAAAATCTGGTGGACGTGGAC
GATTATCTACGCTGTCAGCAGGCGTGTTTTTATTGATTATGGTAGTTTTTCTTGGACCTTGGTTAAAGCAAATTCCGATG
GCTGCTTTGGTATCAGTGATGATCATGGTTGCGATTGGTACTTTCTCATGGCGCTCAATTACTGATTTGAAAAAACACCC
ATTATCGACAAACATTGTTATGTTAGTCACAGTGATTATTGTGGTAATGACGCATAACTTAGCCATTGGGGTTCTGGTTG
GTGTGTTGCTTGCTTCACTATTCTTTGCTAATAAAATCAGTAGGATGATGGTAATAAAAAATAACTCGGAAGAGACCAAG
TCGCGTGAATATATTGTAATAGGACAAGTGTTTTTTGCTTCATCGGATAAATTTATTGCTTCCTTTGATTTTAAAGAAGT
GATCGAATGTGTGACGATTGATTTATCAGCGGCTCATTTTTGGGATATCACCTCGGCATCAGCCTTGGATAAAGTGGTGG
TCAAGTTCCGTAGAGAAGGGACGCAAGTAGAGCTTATTGGAATGAACCAAGCAACCAAGACTATTGTTGATAAATTTGGT
GTGCATGATAAACCTGAAGAAGTTGAAAAACTATTGGCCGGACATTAA

Upstream 100 bases:

>100_bases
TTTCGGCTACTTTTCCGCGCTCAACATTTATCAAAGAAGCACTTATTTACACCCCAGATCTATTTCTGGTGCGTATTGCC
GTGCATAAATTGAGAATTCA

Downstream 100 bases:

>100_bases
GGATTGAAGAATGAAAAATATAATAGCTTGTATTGACGGTTCCCCTACAACCTTCGCGACATGTGAAGCGAGTGCATGGG
TTGCATCTAAGATTAATGCT

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MFKNFKIDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFAGGRSGMISAATGAMALLMVTL
VKEHGLEYLLAATVLTGVFQILAGYLKLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTDVTWHVYAMTVAGLGIIYLF
PYLPVIGKLIPSPLVCIIALTIISIWFGIDVRTVGDMGHLPDTLPIFLWPDVPLNLNTLLIVLPYSLGLAVVGLLESMMT
ATIVDDLTDTSSDKNRECKGQGIANIFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLSAGVFLLIMVVFLGPWLKQIPM
AALVSVMIMVAIGTFSWRSITDLKKHPLSTNIVMLVTVIIVVMTHNLAIGVLVGVLLASLFFANKISRMMVIKNNSEETK
SREYIVIGQVFFASSDKFIASFDFKEVIECVTIDLSAAHFWDITSASALDKVVVKFRREGTQVELIGMNQATKTIVDKFG
VHDKPEEVEKLLAGH

Sequences:

>Translated_495_residues
MFKNFKIDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFAGGRSGMISAATGAMALLMVTL
VKEHGLEYLLAATVLTGVFQILAGYLKLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTDVTWHVYAMTVAGLGIIYLF
PYLPVIGKLIPSPLVCIIALTIISIWFGIDVRTVGDMGHLPDTLPIFLWPDVPLNLNTLLIVLPYSLGLAVVGLLESMMT
ATIVDDLTDTSSDKNRECKGQGIANIFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLSAGVFLLIMVVFLGPWLKQIPM
AALVSVMIMVAIGTFSWRSITDLKKHPLSTNIVMLVTVIIVVMTHNLAIGVLVGVLLASLFFANKISRMMVIKNNSEETK
SREYIVIGQVFFASSDKFIASFDFKEVIECVTIDLSAAHFWDITSASALDKVVVKFRREGTQVELIGMNQATKTIVDKFG
VHDKPEEVEKLLAGH
>Mature_495_residues
MFKNFKIDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFAGGRSGMISAATGAMALLMVTL
VKEHGLEYLLAATVLTGVFQILAGYLKLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTDVTWHVYAMTVAGLGIIYLF
PYLPVIGKLIPSPLVCIIALTIISIWFGIDVRTVGDMGHLPDTLPIFLWPDVPLNLNTLLIVLPYSLGLAVVGLLESMMT
ATIVDDLTDTSSDKNRECKGQGIANIFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLSAGVFLLIMVVFLGPWLKQIPM
AALVSVMIMVAIGTFSWRSITDLKKHPLSTNIVMLVTVIIVVMTHNLAIGVLVGVLLASLFFANKISRMMVIKNNSEETK
SREYIVIGQVFFASSDKFIASFDFKEVIECVTIDLSAAHFWDITSASALDKVVVKFRREGTQVELIGMNQATKTIVDKFG
VHDKPEEVEKLLAGH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI94721259, Length=483, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI94721255, Length=483, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI94721253, Length=483, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI94721257, Length=483, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI16306483, Length=471, Percent_Identity=23.3545647558386, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI20336282, Length=471, Percent_Identity=23.3545647558386, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI4557535, Length=355, Percent_Identity=22.2535211267606, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI45827800, Length=552, Percent_Identity=23.5507246376812, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI39752683, Length=552, Percent_Identity=23.5507246376812, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI262206105, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI262206075, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI262206069, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI262206063, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI45827802, Length=380, Percent_Identity=23.9473684210526, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081859, Length=514, Percent_Identity=26.4591439688716, Blast_Score=158, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17566848, Length=379, Percent_Identity=26.1213720316623, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86565215, Length=502, Percent_Identity=20.7171314741036, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24649801, Length=553, Percent_Identity=24.5931283905967, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24651449, Length=517, Percent_Identity=24.1779497098646, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21358229, Length=533, Percent_Identity=24.765478424015, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI19922482, Length=142, Percent_Identity=33.0985915492958, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358633, Length=131, Percent_Identity=30.5343511450382, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85815873, Length=137, Percent_Identity=34.3065693430657, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24647160, Length=143, Percent_Identity=26.5734265734266, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21355087, Length=143, Percent_Identity=26.5734265734266, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 53471; Mature: 53471

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNFKIDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFAG
CCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
GRSGMISAATGAMALLMVTLVKEHGLEYLLAATVLTGVFQILAGYLKLGSLMRFVSRSVV
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFMAQLPELTDVTWHVYAMTVAGLGIIYLFPYLPVIGKLIPSPLVCIIAL
HHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TIISIWFGIDVRTVGDMGHLPDTLPIFLWPDVPLNLNTLLIVLPYSLGLAVVGLLESMMT
HHHHHHHCCCEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
ATIVDDLTDTSSDKNRECKGQGIANIFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLSA
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHH
GVFLLIMVVFLGPWLKQIPMAALVSVMIMVAIGTFSWRSITDLKKHPLSTNIVMLVTVII
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH
VVMTHNLAIGVLVGVLLASLFFANKISRMMVIKNNSEETKSREYIVIGQVFFASSDKFIA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEECCCCEEE
SFDFKEVIECVTIDLSAAHFWDITSASALDKVVVKFRREGTQVELIGMNQATKTIVDKFG
ECCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCC
VHDKPEEVEKLLAGH
CCCCHHHHHHHHCCC
>Mature Secondary Structure
MFKNFKIDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFAG
CCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
GRSGMISAATGAMALLMVTLVKEHGLEYLLAATVLTGVFQILAGYLKLGSLMRFVSRSVV
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFMAQLPELTDVTWHVYAMTVAGLGIIYLFPYLPVIGKLIPSPLVCIIAL
HHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TIISIWFGIDVRTVGDMGHLPDTLPIFLWPDVPLNLNTLLIVLPYSLGLAVVGLLESMMT
HHHHHHHCCCEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
ATIVDDLTDTSSDKNRECKGQGIANIFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLSA
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHH
GVFLLIMVVFLGPWLKQIPMAALVSVMIMVAIGTFSWRSITDLKKHPLSTNIVMLVTVII
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH
VVMTHNLAIGVLVGVLLASLFFANKISRMMVIKNNSEETKSREYIVIGQVFFASSDKFIA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEECCCCEEE
SFDFKEVIECVTIDLSAAHFWDITSASALDKVVVKFRREGTQVELIGMNQATKTIVDKFG
ECCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCC
VHDKPEEVEKLLAGH
CCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]