Click here to switch to the map view.

The map label for this gene is yihN [H]

Identifier: 59714140

GI number: 59714140

Start: 1075667

End: 1076965

Strand: Reverse

Name: yihN [H]

Synonym: VF_A0957

Alternate gene names: 59714140

Gene position: 1076965-1075667 (Counterclockwise)

Preceding gene: 59714141

Following gene: 59714138

Centisome position: 80.95

GC content: 39.03

Gene sequence:

>1299_bases
ATGAACTTATTTGAAAAGATTGGGTTTACCAGTCGAAATCAGCTATTCGGTTTTTTCTCTGTCGTAATGTCAGGGCAAAT
TATTTACTCGGCTTTTGAAGCCTTTAAAGGGACATTTTATAATTTATTATTAGAAGTACTAAAAATAGATAATACCCAAA
TGGGGATCCTATTTACGCTGATAGGCTCAGCAATGTTCTTCTATATTCCAGCTGGTTGGGTCAATAATCGTTTTTCTGTT
AAATCCATTTTAATAACCAGTTTGTCGATTCGTTTTTTAAGTATGATGGCGATCATCTTCTTAGAACCTGGTTTTAGCGT
ACTTGTCGTTATTGCAGGTATTTGGGGCTTAGTCGACGCCGCATTCTGGCCTGCCGTTGTGAATGGTGTGACGTTAATGT
CTGGCGATAGAAACAAAGGAATGGCGTTTGGGCTATTAGAATCTGTGCGACGCGCTGCTGAGATGAGTATGAATGCGGTT
ATCGTCGGTATCATGGCATTGGTTGGTGGCTCTATTCTTGTATTCCAAGGTGCAATTGTTTTCTATACATTACTTATTCT
CCCAATGATCTTCTGTGTATGGAAATTCGTACCAGATAACCATATGGAAATTAAGCAAGGTGAAAGCAAAAACAAAGAGG
CATTAAAAGGCTTAATTCACGTTTTAAAAATGCCAACGGTATGGCTAGCTGCAATTACATCTCTAACTGTATATTGGATT
TACATTACACTGATTTATACGGTCCCTTATCTTCAAGCTGTGTTCGGGTTGTCTACTGCTCAAGCTGCGATCTTCGGTAT
CATTAATACAGGCGCAATGGGTGTTGTTGCAGGTCTTGTCGCTGGCTCTATTGCTGATTTCATTTTTAAATCTTCCATTA
AGATGATGTTCTTCGCTTTAGGTTTAACGGCGGTATGTTTAGGTGTGACGATTGCTCTACCTAAATCAGAAGGCATGTTA
ATGATGAACATGGTTCTATTAATGTGTTTCTCATTTAGCATTTTCTTAGCAAAAGGTATTATTTTAGCGCCAGTGGCAGA
AGCGGGCGTGCCTAAAGATTACAGTGGTTCAGCAATGAGTGTCGGTTCATTTGCAGCTTATGCTTCTGTATTCTGGGCAT
ATGCATTAAATGGCTGGATTATTGATAGCTATCCTGCAGTTCAGGCATATCAAATGATCTTTGGTATTGGTTTAACTGTT
GCTGTTGTTGGTATGGTGTGCTCACTCATTCTTATTTCATTGAAGAAGAAGAACAGTGGTGGAGATAATGAAAAACGCAT
GGTTGAATCAGAAGCGTAA

Upstream 100 bases:

>100_bases
ATGGTATCTGTACTGATATAGCTCATAAGTTCCCTTCTAAATACAAAGCAAAACAATAATAACAAAACTAATAATTCAAT
AACGTGAAAGGATTGCTCAA

Downstream 100 bases:

>100_bases
TCATGTAATTAGTCTTTATCAGAAATAAAATAGCCCCTAGTATGTTTATTCATGCTAGGGGCTATTTTTAGTTGTATCTA
TGTAATGAAATTAAGCGTTT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MNLFEKIGFTSRNQLFGFFSVVMSGQIIYSAFEAFKGTFYNLLLEVLKIDNTQMGILFTLIGSAMFFYIPAGWVNNRFSV
KSILITSLSIRFLSMMAIIFLEPGFSVLVVIAGIWGLVDAAFWPAVVNGVTLMSGDRNKGMAFGLLESVRRAAEMSMNAV
IVGIMALVGGSILVFQGAIVFYTLLILPMIFCVWKFVPDNHMEIKQGESKNKEALKGLIHVLKMPTVWLAAITSLTVYWI
YITLIYTVPYLQAVFGLSTAQAAIFGIINTGAMGVVAGLVAGSIADFIFKSSIKMMFFALGLTAVCLGVTIALPKSEGML
MMNMVLLMCFSFSIFLAKGIILAPVAEAGVPKDYSGSAMSVGSFAAYASVFWAYALNGWIIDSYPAVQAYQMIFGIGLTV
AVVGMVCSLILISLKKKNSGGDNEKRMVESEA

Sequences:

>Translated_432_residues
MNLFEKIGFTSRNQLFGFFSVVMSGQIIYSAFEAFKGTFYNLLLEVLKIDNTQMGILFTLIGSAMFFYIPAGWVNNRFSV
KSILITSLSIRFLSMMAIIFLEPGFSVLVVIAGIWGLVDAAFWPAVVNGVTLMSGDRNKGMAFGLLESVRRAAEMSMNAV
IVGIMALVGGSILVFQGAIVFYTLLILPMIFCVWKFVPDNHMEIKQGESKNKEALKGLIHVLKMPTVWLAAITSLTVYWI
YITLIYTVPYLQAVFGLSTAQAAIFGIINTGAMGVVAGLVAGSIADFIFKSSIKMMFFALGLTAVCLGVTIALPKSEGML
MMNMVLLMCFSFSIFLAKGIILAPVAEAGVPKDYSGSAMSVGSFAAYASVFWAYALNGWIIDSYPAVQAYQMIFGIGLTV
AVVGMVCSLILISLKKKNSGGDNEKRMVESEA
>Mature_432_residues
MNLFEKIGFTSRNQLFGFFSVVMSGQIIYSAFEAFKGTFYNLLLEVLKIDNTQMGILFTLIGSAMFFYIPAGWVNNRFSV
KSILITSLSIRFLSMMAIIFLEPGFSVLVVIAGIWGLVDAAFWPAVVNGVTLMSGDRNKGMAFGLLESVRRAAEMSMNAV
IVGIMALVGGSILVFQGAIVFYTLLILPMIFCVWKFVPDNHMEIKQGESKNKEALKGLIHVLKMPTVWLAAITSLTVYWI
YITLIYTVPYLQAVFGLSTAQAAIFGIINTGAMGVVAGLVAGSIADFIFKSSIKMMFFALGLTAVCLGVTIALPKSEGML
MMNMVLLMCFSFSIFLAKGIILAPVAEAGVPKDYSGSAMSVGSFAAYASVFWAYALNGWIIDSYPAVQAYQMIFGIGLTV
AVVGMVCSLILISLKKKNSGGDNEKRMVESEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1790306, Length=426, Percent_Identity=26.2910798122066, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI2367161, Length=386, Percent_Identity=20.9844559585492, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46887; Mature: 46887

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCCC
>Mature Secondary Structure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CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]