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The map label for this gene is 59714109

Identifier: 59714109

GI number: 59714109

Start: 1050365

End: 1051165

Strand: Reverse

Name: 59714109

Synonym: VF_A0926

Alternate gene names: NA

Gene position: 1051165-1050365 (Counterclockwise)

Preceding gene: 59714110

Following gene: 59714107

Centisome position: 79.02

GC content: 37.08

Gene sequence:

>801_bases
ATGATTTTTAGTGTGTTGATTATTAGCTTCATCTTCTTATTACGCCATTATGCGGTAAAGCATATTCGTGGTGATATTGC
TTTTTTAACTGAAGATCAACGTAAATGGATTTCTCGGACCAAAAATGGTTCGTTTACTGTGATTGTTATTACGTTATTTA
TTTTATGGCAATCAGAGATTAATGAATTTGCTTTATCCGTTACTGCTATTGCCGTTGCAATTGTGGTGGCATCGAAAGAA
ATTATTTTGTGTTTTACTGGCTCGATTCAACGTGCAAGTTCTCGTTCATTTCGAATAGGAGATTGGATTGAAGTAGGATC
TTTGTGCGGTGAAGTTATTGAGCACAACATGATGGCTACGGTTATCCAAGAGATTGATTTACACCATAGCCAATATGATT
ACACAGGGAAAACAGCTACGCTTCCAAACAGTATGTTTTTTACATACCCAGTGAAAAACCTGAATTTCATGAAGCGCTAT
GTTTATCATAACTTCTCAATCTGCGTTAAAGAGTTCGTGAATCTATACCCAATGCTACCGGATCTATTAGCAAAGATAGA
TGTCCATTGTGAAGAGTTTATTGAAGTAGCACGACGCTATAACAGCGTAATAGAGAAGCACGCAGGTGTCGACCTTCCAG
GTTCAGAGCCCCATATTCATATTACGACTACTTCAATGGGCGATCAAAAAGTGCATTACATGATCTTTTGCCCAACAGAA
AAAGCATCTCATTTAGAGCAACTTATTCGCCAAGATTTTATGGAAATGTATGAGATTAATTTTCCACAGAAAACAGAGTA
G

Upstream 100 bases:

>100_bases
TGGGATATTTACTGCTAGTTGTTGAGTAATAAAGCAGTAAGTAGAAGAGGTAAGCGTGGATAGACTGTTACTAGTAATAG
ATTTTTTATTAACACATAAG

Downstream 100 bases:

>100_bases
CAAAAAATAAAGTCTATAGGCATAAAGTTTTATTCATACACTTAATTTTTAAGGTATGGACAATTAATGGCGCCAGTTAA
AATTGCTTTAGAAATACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Integral Membrane Protein; Mechanosensitive Ion Channel MscS; Membrane Associated Protein; MscS Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIFSVLIISFIFLLRHYAVKHIRGDIAFLTEDQRKWISRTKNGSFTVIVITLFILWQSEINEFALSVTAIAVAIVVASKE
IILCFTGSIQRASSRSFRIGDWIEVGSLCGEVIEHNMMATVIQEIDLHHSQYDYTGKTATLPNSMFFTYPVKNLNFMKRY
VYHNFSICVKEFVNLYPMLPDLLAKIDVHCEEFIEVARRYNSVIEKHAGVDLPGSEPHIHITTTSMGDQKVHYMIFCPTE
KASHLEQLIRQDFMEMYEINFPQKTE

Sequences:

>Translated_266_residues
MIFSVLIISFIFLLRHYAVKHIRGDIAFLTEDQRKWISRTKNGSFTVIVITLFILWQSEINEFALSVTAIAVAIVVASKE
IILCFTGSIQRASSRSFRIGDWIEVGSLCGEVIEHNMMATVIQEIDLHHSQYDYTGKTATLPNSMFFTYPVKNLNFMKRY
VYHNFSICVKEFVNLYPMLPDLLAKIDVHCEEFIEVARRYNSVIEKHAGVDLPGSEPHIHITTTSMGDQKVHYMIFCPTE
KASHLEQLIRQDFMEMYEINFPQKTE
>Mature_266_residues
MIFSVLIISFIFLLRHYAVKHIRGDIAFLTEDQRKWISRTKNGSFTVIVITLFILWQSEINEFALSVTAIAVAIVVASKE
IILCFTGSIQRASSRSFRIGDWIEVGSLCGEVIEHNMMATVIQEIDLHHSQYDYTGKTATLPNSMFFTYPVKNLNFMKRY
VYHNFSICVKEFVNLYPMLPDLLAKIDVHCEEFIEVARRYNSVIEKHAGVDLPGSEPHIHITTTSMGDQKVHYMIFCPTE
KASHLEQLIRQDFMEMYEINFPQKTE

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30756; Mature: 30756

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSVLIISFIFLLRHYAVKHIRGDIAFLTEDQRKWISRTKNGSFTVIVITLFILWQSEI
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
NEFALSVTAIAVAIVVASKEIILCFTGSIQRASSRSFRIGDWIEVGSLCGEVIEHNMMAT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIQEIDLHHSQYDYTGKTATLPNSMFFTYPVKNLNFMKRYVYHNFSICVKEFVNLYPMLP
HHHHHHCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLAKIDVHCEEFIEVARRYNSVIEKHAGVDLPGSEPHIHITTTSMGDQKVHYMIFCPTE
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCH
KASHLEQLIRQDFMEMYEINFPQKTE
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIFSVLIISFIFLLRHYAVKHIRGDIAFLTEDQRKWISRTKNGSFTVIVITLFILWQSEI
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
NEFALSVTAIAVAIVVASKEIILCFTGSIQRASSRSFRIGDWIEVGSLCGEVIEHNMMAT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIQEIDLHHSQYDYTGKTATLPNSMFFTYPVKNLNFMKRYVYHNFSICVKEFVNLYPMLP
HHHHHHCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLAKIDVHCEEFIEVARRYNSVIEKHAGVDLPGSEPHIHITTTSMGDQKVHYMIFCPTE
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCH
KASHLEQLIRQDFMEMYEINFPQKTE
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA