| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is luxC [H]
Identifier: 59714106
GI number: 59714106
Start: 1047306
End: 1048745
Strand: Reverse
Name: luxC [H]
Synonym: VF_A0923
Alternate gene names: 59714106
Gene position: 1048745-1047306 (Counterclockwise)
Preceding gene: 59714107
Following gene: 59714105
Centisome position: 78.83
GC content: 35.42
Gene sequence:
>1440_bases ATGATTAAATGTATTCCGATGATAATTAAAGGCGTAGTTCAAGATTTTGATAATAACGCTTGTAAAGAAATAAATTTAGA TAGTGGTAATAAAATTAAATTATCTCTTCTTACTGAAGATTCAGTTTTAAGATCATTAAATTCTAAAGAAAAAGTTGATC TTAACTTAAATCAGATTGTAAATTTCCTATATACCGTAGGTCAACGATGGAAAAATGAAGAATATAATCGAAGACGAACT TATATTCGTGAGTTAAAAAAATATCTTGGATATTCTGATGAAATGGCTAGATTAGAAGCCAATTGGATAGCTATGTTATT GTGTTCTAAAAGTGCTTTGTATGACATTGTTAATTACGATTTGGGATCTATACACGTGTTGGATGAATGGCTTCCGCGTG GTGATTGCTATGTTAAAGCACAAGCAAAAGGTGTTTCTATTCACTTGTTGGCTGGTAATGTTCCACTATCAGGGGTGACA TCTATTTTGCGTGCTATTTTGACAAAAAATGAATGCATAATTAAAACCTCTTCTTCAGATCCGTTTACTGCAACGGCTTT GGCTTCGAGTTTTATTGATGTTAATGCAGAGCATCCAATAACTAAATCAATGTCTGTTATGTATTGGCCGCATAATGAAG ATATGACTCTACCTCAAAGAATTATGAATCATGCAGACATTGTTATTGCTTGGGGAGGAGAAGAGGCGATTAAATGGGCG GCAAAACACTCACCACCGCATGCCGATGTTCTTAAATTTGGACCAAAGAAAAGTTTAAGCATTATTGAGGAGCCTGAAGA CATGGAGGAAGCTGCAATGGGGGTTGCCCATGATATCTGTTTCTATGATCAGCAAGCCTGCTTCTCAACTCAAGACGTTT ATTATATCGGAGAACATTTGCCTTTATTTTTAAGTGAACTTGAAAAACAGCTAGATCGATACGCAAAGATTTTACCAAAA GGTTTAAAAAATTTTGATGAAAAAGCGGCGTTTTCTCTTACCGAAAGAGAGGGAATATTTGCTGGATATGACGTAAAAAA GGGGGATAACCAAGCTTGGTTAATGATTATATCTCCTACAAATAGCTCTGGAAATCAGCCATTATCTCGAAGCGTGTATA TACATCAAGTCTCTGATATTAATGAGGTGCTTCCTTTTGTAAATAAAAATAGTACACAAACCGTCTCTATTTACCCTTGG GAGGCTTCACTGAAATATAGAGACAAATTAGCGATGAGTGGTGCTGAGAGAATCGTTGAATCAGGAATGAATAATATTTT CAGAGTTGGAGGAGCACATGATTCATTATCTCCTCTCCAGTATTTAGTTAGGTTTACCTCCCATGAAAGACCATTTCATT ATACAACCAAGGATGTTGCGGTTGAAATTGAACAAACGCGTTACTTAGAAGAAGACAAATTTTTGGTTTTTGTCCCATAG
Upstream 100 bases:
>100_bases ACTAGATCTGTTGTATTGTCTATGCCTATTAATGATCAGTTTAGAAAAGCTGTATCAAATTAATACTCGAACATAATACA TATAGTTAGTAGGGGAAATA
Downstream 100 bases:
>100_bases TTAAAAGGAAATTATATGAAAGATGAAAGTAGCTTTTTCACGATTGATCATATTATTGAGCTTGAAAATGGTCAGTCCAT CCGGGTTTGGGAGACTCCTC
Product: acyl-CoA reductase LuxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MIKCIPMIIKGVVQDFDNNACKEINLDSGNKIKLSLLTEDSVLRSLNSKEKVDLNLNQIVNFLYTVGQRWKNEEYNRRRT YIRELKKYLGYSDEMARLEANWIAMLLCSKSALYDIVNYDLGSIHVLDEWLPRGDCYVKAQAKGVSIHLLAGNVPLSGVT SILRAILTKNECIIKTSSSDPFTATALASSFIDVNAEHPITKSMSVMYWPHNEDMTLPQRIMNHADIVIAWGGEEAIKWA AKHSPPHADVLKFGPKKSLSIIEEPEDMEEAAMGVAHDICFYDQQACFSTQDVYYIGEHLPLFLSELEKQLDRYAKILPK GLKNFDEKAAFSLTEREGIFAGYDVKKGDNQAWLMIISPTNSSGNQPLSRSVYIHQVSDINEVLPFVNKNSTQTVSIYPW EASLKYRDKLAMSGAERIVESGMNNIFRVGGAHDSLSPLQYLVRFTSHERPFHYTTKDVAVEIEQTRYLEEDKFLVFVP
Sequences:
>Translated_479_residues MIKCIPMIIKGVVQDFDNNACKEINLDSGNKIKLSLLTEDSVLRSLNSKEKVDLNLNQIVNFLYTVGQRWKNEEYNRRRT YIRELKKYLGYSDEMARLEANWIAMLLCSKSALYDIVNYDLGSIHVLDEWLPRGDCYVKAQAKGVSIHLLAGNVPLSGVT SILRAILTKNECIIKTSSSDPFTATALASSFIDVNAEHPITKSMSVMYWPHNEDMTLPQRIMNHADIVIAWGGEEAIKWA AKHSPPHADVLKFGPKKSLSIIEEPEDMEEAAMGVAHDICFYDQQACFSTQDVYYIGEHLPLFLSELEKQLDRYAKILPK GLKNFDEKAAFSLTEREGIFAGYDVKKGDNQAWLMIISPTNSSGNQPLSRSVYIHQVSDINEVLPFVNKNSTQTVSIYPW EASLKYRDKLAMSGAERIVESGMNNIFRVGGAHDSLSPLQYLVRFTSHERPFHYTTKDVAVEIEQTRYLEEDKFLVFVP >Mature_479_residues MIKCIPMIIKGVVQDFDNNACKEINLDSGNKIKLSLLTEDSVLRSLNSKEKVDLNLNQIVNFLYTVGQRWKNEEYNRRRT YIRELKKYLGYSDEMARLEANWIAMLLCSKSALYDIVNYDLGSIHVLDEWLPRGDCYVKAQAKGVSIHLLAGNVPLSGVT SILRAILTKNECIIKTSSSDPFTATALASSFIDVNAEHPITKSMSVMYWPHNEDMTLPQRIMNHADIVIAWGGEEAIKWA AKHSPPHADVLKFGPKKSLSIIEEPEDMEEAAMGVAHDICFYDQQACFSTQDVYYIGEHLPLFLSELEKQLDRYAKILPK GLKNFDEKAAFSLTEREGIFAGYDVKKGDNQAWLMIISPTNSSGNQPLSRSVYIHQVSDINEVLPFVNKNSTQTVSIYPW EASLKYRDKLAMSGAERIVESGMNNIFRVGGAHDSLSPLQYLVRFTSHERPFHYTTKDVAVEIEQTRYLEEDKFLVFVP
Specific function: LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016162 - InterPro: IPR008670 [H]
Pfam domain/function: PF05893 LuxC [H]
EC number: =1.2.1.50 [H]
Molecular weight: Translated: 54339; Mature: 54339
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKCIPMIIKGVVQDFDNNACKEINLDSGNKIKLSLLTEDSVLRSLNSKEKVDLNLNQIV CCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCCEECCCHHHHH NFLYTVGQRWKNEEYNRRRTYIRELKKYLGYSDEMARLEANWIAMLLCSKSALYDIVNYD HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHCCHHHHHHHCCC LGSIHVLDEWLPRGDCYVKAQAKGVSIHLLAGNVPLSGVTSILRAILTKNECIIKTSSSD CCCEEEHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC PFTATALASSFIDVNAEHPITKSMSVMYWPHNEDMTLPQRIMNHADIVIAWGGEEAIKWA CEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEEEEECCHHHHHHH AKHSPPHADVLKFGPKKSLSIIEEPEDMEEAAMGVAHDICFYDQQACFSTQDVYYIGEHL HCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCHH PLFLSELEKQLDRYAKILPKGLKNFDEKAAFSLTEREGIFAGYDVKKGDNQAWLMIISPT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEHHCCCEEECCCCCCCCCCEEEEEEECC NSSGNQPLSRSVYIHQVSDINEVLPFVNKNSTQTVSIYPWEASLKYRDKLAMSGAERIVE CCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH SGMNNIFRVGGAHDSLSPLQYLVRFTSHERPFHYTTKDVAVEIEQTRYLEEDKFLVFVP HCCHHEEEECCCCCCHHHHHHHHHHHCCCCCCEEECHHHEEEEHHHHCCCCCCEEEEEC >Mature Secondary Structure MIKCIPMIIKGVVQDFDNNACKEINLDSGNKIKLSLLTEDSVLRSLNSKEKVDLNLNQIV CCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCCEECCCHHHHH NFLYTVGQRWKNEEYNRRRTYIRELKKYLGYSDEMARLEANWIAMLLCSKSALYDIVNYD HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHCCHHHHHHHCCC LGSIHVLDEWLPRGDCYVKAQAKGVSIHLLAGNVPLSGVTSILRAILTKNECIIKTSSSD CCCEEEHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC PFTATALASSFIDVNAEHPITKSMSVMYWPHNEDMTLPQRIMNHADIVIAWGGEEAIKWA CEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEEEEECCHHHHHHH AKHSPPHADVLKFGPKKSLSIIEEPEDMEEAAMGVAHDICFYDQQACFSTQDVYYIGEHL HCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCHH PLFLSELEKQLDRYAKILPKGLKNFDEKAAFSLTEREGIFAGYDVKKGDNQAWLMIISPT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEHHCCCEEECCCCCCCCCCEEEEEEECC NSSGNQPLSRSVYIHQVSDINEVLPFVNKNSTQTVSIYPWEASLKYRDKLAMSGAERIVE CCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH SGMNNIFRVGGAHDSLSPLQYLVRFTSHERPFHYTTKDVAVEIEQTRYLEEDKFLVFVP HCCHHEEEECCCCCCHHHHHHHHHHHCCCCCCEEECHHHEEEEHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3697093 [H]