| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714092
Identifier: 59714092
GI number: 59714092
Start: 1033488
End: 1034285
Strand: Reverse
Name: 59714092
Synonym: VF_A0909
Alternate gene names: NA
Gene position: 1034285-1033488 (Counterclockwise)
Preceding gene: 59714093
Following gene: 59714080
Centisome position: 77.75
GC content: 32.58
Gene sequence:
>798_bases ATGTTTACTCAACGTCCCATTAAGCAAGCAAAAACGATTGATAACGTTTATGGTAGTGCTTTTTATCACCTTGAGGCAAA AGATCGTACGATTGATGAATTGAGAAAAAAGCTAGAAGCAAAAACGGATAATCAAGAATGGATTGATACGGTTTTATCTG ACCTTATTGGCCGTGGTTACCTTAAATCAGATAAGGATTTTGCTATTAATTTTGCTGAGATGGCATTCAATTCAGAAAAA GGGAGTCAATTCATTTTATCTAAGTTAAAAGAAAAAGGGATAAATGAGTCAATAGCAAATGAGGCGATTGATTATTTGGT CAATCGTGATGAAATTTGCGAATTTACTATATTGAACAATCGCTTAAGTAATATGACGTTAGATTCGTATTCAAGCGATA AGCTATATGCAACCTTATTGAAATATGGCTTTAAATCCTCTGATGTAAGAGAAGTCATTAAGTCTCATCCTATTGCATCA ACGCTTCCTTCTAAAATGCAAATCAAAGCAGAGAAAGCTGATATCGTTAAAGAAATAGAAAAGTTGGCTCGTAAGTTAAA AGGAAAGTCCGTAATTAAACGAGAGCTTCAACAAAAACTGATTGATGTTACAAACTTTGATGCACAAATTGAAAAATTAG AAATGGATGGTTCGATTGATTTTTATGAAAACTGCCAATTACGGTTAGATAAAAAACGCTTTGATTTGAGCAATTCAAAA GAGAAAAGCAAAGCTTATGCTTACTTATATTCTCATGGATTTAGTTCAGATGAGATAAAAGAAACGCTGAATAACTAA
Upstream 100 bases:
>100_bases TAATTAACGACAATATATCAGAGGTATTTTCAATTTGTCGTAGTAACCAAAGGCGAAGTGCTTTAGAGTCGGTAGATATT TCATTGTCTTCGAGGTTTTT
Downstream 100 bases:
>100_bases ATTGAGGTTAAGTGTTAGATGACGCGTATTGTGCGTCATCTAACAAACAAATTTAATTAATCAAATGTGTATTTATACGT GATACCGAAGCGTTCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator For RecA; RecA Regulator RecX
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK EKSKAYAYLYSHGFSSDEIKETLNN
Sequences:
>Translated_265_residues MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK EKSKAYAYLYSHGFSSDEIKETLNN >Mature_265_residues MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGYLKSDKDFAINFAEMAFNSEK GSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNNRLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIAS TLPSKMQIKAEKADIVKEIEKLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK EKSKAYAYLYSHGFSSDEIKETLNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30549; Mature: 30549
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGY CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC LKSDKDFAINFAEMAFNSEKGSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNN CCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHC RLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIASTLPSKMQIKAEKADIVKEIE HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH KLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHEECHHHHCCCCCH EKSKAYAYLYSHGFSSDEIKETLNN HHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MFTQRPIKQAKTIDNVYGSAFYHLEAKDRTIDELRKKLEAKTDNQEWIDTVLSDLIGRGY CCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC LKSDKDFAINFAEMAFNSEKGSQFILSKLKEKGINESIANEAIDYLVNRDEICEFTILNN CCCCCCHHEEHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHC RLSNMTLDSYSSDKLYATLLKYGFKSSDVREVIKSHPIASTLPSKMQIKAEKADIVKEIE HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH KLARKLKGKSVIKRELQQKLIDVTNFDAQIEKLEMDGSIDFYENCQLRLDKKRFDLSNSK HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHEECHHHHCCCCCH EKSKAYAYLYSHGFSSDEIKETLNN HHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA