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The map label for this gene is tcpS

Identifier: 59714052

GI number: 59714052

Start: 982028

End: 982477

Strand: Reverse

Name: tcpS

Synonym: VF_A0869

Alternate gene names: NA

Gene position: 982477-982028 (Counterclockwise)

Preceding gene: 59714053

Following gene: 59714051

Centisome position: 73.85

GC content: 26.22

Gene sequence:

>450_bases
ATGAAATATATATTGATTTTTTGTGCTTCTTTTTTGTCTATGAATAATGTTTTTGCAGATGAACTTTCTGTTTTTGAAAA
TAATTATAAAAATATTAATAGTCTAAAAAATAAACTTGAACAATTAGAGCTAAAGAAAAAAATACAAGAAGTAGAAATAA
AAATTTTACAAAATGAAAGCATCCTTAACCCAAAGGTTATTAACACACCTCAAATTGACAAACCAAAAGCTGTTGTTAAA
GTTAAATTTATGGATGAGAGCGATGTGTTTGATCCTAAATTAGTTAAATTACTTTATTTGGTTGGAAATAATGAAGAAAA
AACAGCTGTACTCTCATATAAAAACAAAACACAAAATGTTAAAGATGGTGGTTATTATTATGGTTGGAGGTTAAAAATAA
ACAACAGAAATGTCGTTATATCAAAAGGTTCAAATGCGGTGGCGCTATGA

Upstream 100 bases:

>100_bases
TTTAATGGTGATTTTGTAACCTATGGTGAAATGAATTTAAGAAATAATGATGCAACAATCTATTTTAATTATTTATGTTT
AAATTAAGGATTATGTAATT

Downstream 100 bases:

>100_bases
AAATTAAAATTTTAAAAAAAATCAAAGGTTTTGATTTTTTTAAAGACCACGGTGTAATCTATTGTGAAGTTGATGACGTA
CTATATCAAGCTATATCTGA

Product: toxin coregulated pilus biosynthesis protein TcpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKYILIFCASFLSMNNVFADELSVFENNYKNINSLKNKLEQLELKKKIQEVEIKILQNESILNPKVINTPQIDKPKAVVK
VKFMDESDVFDPKLVKLLYLVGNNEEKTAVLSYKNKTQNVKDGGYYYGWRLKINNRNVVISKGSNAVAL

Sequences:

>Translated_149_residues
MKYILIFCASFLSMNNVFADELSVFENNYKNINSLKNKLEQLELKKKIQEVEIKILQNESILNPKVINTPQIDKPKAVVK
VKFMDESDVFDPKLVKLLYLVGNNEEKTAVLSYKNKTQNVKDGGYYYGWRLKINNRNVVISKGSNAVAL
>Mature_149_residues
MKYILIFCASFLSMNNVFADELSVFENNYKNINSLKNKLEQLELKKKIQEVEIKILQNESILNPKVINTPQIDKPKAVVK
VKFMDESDVFDPKLVKLLYLVGNNEEKTAVLSYKNKTQNVKDGGYYYGWRLKINNRNVVISKGSNAVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17136; Mature: 17136

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYILIFCASFLSMNNVFADELSVFENNYKNINSLKNKLEQLELKKKIQEVEIKILQNES
CEEEEEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
ILNPKVINTPQIDKPKAVVKVKFMDESDVFDPKLVKLLYLVGNNEEKTAVLSYKNKTQNV
CCCCEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEECCCCCCEEEEEECCCCCCC
KDGGYYYGWRLKINNRNVVISKGSNAVAL
CCCCEEEEEEEEECCCEEEEECCCCEECC
>Mature Secondary Structure
MKYILIFCASFLSMNNVFADELSVFENNYKNINSLKNKLEQLELKKKIQEVEIKILQNES
CEEEEEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
ILNPKVINTPQIDKPKAVVKVKFMDESDVFDPKLVKLLYLVGNNEEKTAVLSYKNKTQNV
CCCCEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEECCCCCCEEEEEECCCCCCC
KDGGYYYGWRLKINNRNVVISKGSNAVAL
CCCCEEEEEEEEECCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA