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The map label for this gene is astB

Identifier: 59714030

GI number: 59714030

Start: 955610

End: 956944

Strand: Reverse

Name: astB

Synonym: VF_A0847

Alternate gene names: 59714030

Gene position: 956944-955610 (Counterclockwise)

Preceding gene: 59714032

Following gene: 59714028

Centisome position: 71.93

GC content: 39.63

Gene sequence:

>1335_bases
ATGAAAACAGTTGAATCAAACTTTGATGGTCTCGTTGGGCCTACACATAATTACAGCGGCTTGTCGGTTGGTAATATCGC
CTCTAAAAGCAATCAATCTGGTGTGTCTAATCCCAAACAAGCAGTAAAGCAAGGTTTGGAAAAAATGAAAGCATTGCATG
ATATGGGGTTTGTTCAAGGGGTGCTTGCACCGCAGGAGCGTCCAGATATCCATACACTTCGACGTTTAGGTTTTTCTGGC
TCTGATTCTGAAGTACTAAAAAAGTCATATCAATATTCACCTCAATTACTTGCTGCTTGTTCTTCTGCATCAAGTATGTG
GACGGCCAATGCTGGCACTGTTTCTCCAAGTGCAGATACAGCGGATGGGAAAGTCCATTTCACACCAGCGAATTTAATTA
ATAAGTTTCACCGTTCGATAGAGGATCAGGTTACGGGGAATATTTTAAAAGCCACTTTTTCTGATGAGGAGCACTTTGTT
CACCATCAAGCATTACCGCACAGTGATTATTTTGGTGATGAAGGCGCTGCAAACCACACTCGTTTTTGTCGTGAGTATGG
TGAGCAAGGGGTTGAGTTTTTTGTTTTTGGAAAAAGTGCCTTTAATGAAAGTTATCTTGCTCCTAAAAAATACCCAGCAC
GTCAGACATTAGAAGCGAGTGAAGCCATCGCTCGTACACATGGTTTACGTGAGCAATTCACTGTATTCGCACAGCAGAAT
CCCGATGTTATTGATCAAGGTGTCTTCCATAACGATGTAATTGCAGTGGGAAATAAGAATACATTGTTTTGTCACCAACA
AGCTTTTCTGAATCAAGAAAAAGTGAAGTCTGACTTGAGTGATTCTTATGGTTCTGGCTTTAATGTTATCGAGGTACCAA
CTGATAAAGTATCCGTTCAAGATGCAGTAGAAACGTATCTGTTTAATAGTCAGTTAATCACCAAAGCTGATGGAACTACT
TTGATTATTCTTCCTGAACATTGTCGTCAAAATTCAAGAGTATGGGCTTATTTAAATGAGTTAGTAGAGCAAAAGTGTGG
TATTGATGAGTTACATACCTTTGATTTAAAACAGAGTATGCAAAATGGTGGTGGACCAGCGTGTTTGCGTTTGCGAGTCG
TGTTAAATGAAGCTGAGCAAAAGGCGGTAAATCAACATACGTTAATGAGTGAAGAGCTATTTACGACTCTTAATCTATGG
GCAGATAAGCATTATCGAGACCGTATTGAAGATAAAGATCTTGCGGATCCTCAATTGCTAGTAGAATCTCGCGCAGCATT
AGATGAATTAACGCAAATTATGCATTTAGGTTCTATTTATCCATTCCAAAAATAG

Upstream 100 bases:

>100_bases
ATATCAAATGCTACTGATTAGAGATAAGTTTGCTAATATCGATGCCAAAGAGTGAGCCAAAGAGCTTAACAAGTAGCATT
TAACAGTCATGAGGAAATAT

Downstream 100 bases:

>100_bases
CGGAATAATCTGTTATTTTTTAATAGTTAACTAATTAATAATTAAATAAAAAGCCTTAAATGTAGGATCATTTATGGCTT
TTTAATTTTTGAAGTTTACA

Product: succinylarginine dihydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKTVESNFDGLVGPTHNYSGLSVGNIASKSNQSGVSNPKQAVKQGLEKMKALHDMGFVQGVLAPQERPDIHTLRRLGFSG
SDSEVLKKSYQYSPQLLAACSSASSMWTANAGTVSPSADTADGKVHFTPANLINKFHRSIEDQVTGNILKATFSDEEHFV
HHQALPHSDYFGDEGAANHTRFCREYGEQGVEFFVFGKSAFNESYLAPKKYPARQTLEASEAIARTHGLREQFTVFAQQN
PDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEKVKSDLSDSYGSGFNVIEVPTDKVSVQDAVETYLFNSQLITKADGTT
LIILPEHCRQNSRVWAYLNELVEQKCGIDELHTFDLKQSMQNGGGPACLRLRVVLNEAEQKAVNQHTLMSEELFTTLNLW
ADKHYRDRIEDKDLADPQLLVESRAALDELTQIMHLGSIYPFQK

Sequences:

>Translated_444_residues
MKTVESNFDGLVGPTHNYSGLSVGNIASKSNQSGVSNPKQAVKQGLEKMKALHDMGFVQGVLAPQERPDIHTLRRLGFSG
SDSEVLKKSYQYSPQLLAACSSASSMWTANAGTVSPSADTADGKVHFTPANLINKFHRSIEDQVTGNILKATFSDEEHFV
HHQALPHSDYFGDEGAANHTRFCREYGEQGVEFFVFGKSAFNESYLAPKKYPARQTLEASEAIARTHGLREQFTVFAQQN
PDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEKVKSDLSDSYGSGFNVIEVPTDKVSVQDAVETYLFNSQLITKADGTT
LIILPEHCRQNSRVWAYLNELVEQKCGIDELHTFDLKQSMQNGGGPACLRLRVVLNEAEQKAVNQHTLMSEELFTTLNLW
ADKHYRDRIEDKDLADPQLLVESRAALDELTQIMHLGSIYPFQK
>Mature_444_residues
MKTVESNFDGLVGPTHNYSGLSVGNIASKSNQSGVSNPKQAVKQGLEKMKALHDMGFVQGVLAPQERPDIHTLRRLGFSG
SDSEVLKKSYQYSPQLLAACSSASSMWTANAGTVSPSADTADGKVHFTPANLINKFHRSIEDQVTGNILKATFSDEEHFV
HHQALPHSDYFGDEGAANHTRFCREYGEQGVEFFVFGKSAFNESYLAPKKYPARQTLEASEAIARTHGLREQFTVFAQQN
PDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEKVKSDLSDSYGSGFNVIEVPTDKVSVQDAVETYLFNSQLITKADGTT
LIILPEHCRQNSRVWAYLNELVEQKCGIDELHTFDLKQSMQNGGGPACLRLRVVLNEAEQKAVNQHTLMSEELFTTLNLW
ADKHYRDRIEDKDLADPQLLVESRAALDELTQIMHLGSIYPFQK

Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2)

COG id: COG3724

COG function: function code E; Succinylarginine dihydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the succinylarginine dihydrolase family

Homologues:

Organism=Escherichia coli, GI1788041, Length=444, Percent_Identity=58.1081081081081, Blast_Score=533, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ASTB_VIBF1 (Q5DZ79)

Other databases:

- EMBL:   CP000021
- RefSeq:   YP_206805.1
- HSSP:   P76216
- ProteinModelPortal:   Q5DZ79
- SMR:   Q5DZ79
- STRING:   Q5DZ79
- GeneID:   3280641
- GenomeReviews:   CP000021_GR
- KEGG:   vfi:VF_A0847
- NMPDR:   fig|312309.3.peg.3133
- eggNOG:   COG3724
- HOGENOM:   HBG289862
- OMA:   KKYPARQ
- PhylomeDB:   Q5DZ79
- ProtClustDB:   PRK13281
- BioCyc:   VFIS312309:VFA0847-MONOMER
- HAMAP:   MF_01172
- InterPro:   IPR007079
- Gene3D:   G3DSA:3.75.10.20
- TIGRFAMs:   TIGR03241

Pfam domain/function: PF04996 AstB

EC number: =3.5.3.23

Molecular weight: Translated: 49401; Mature: 49401

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: ACT_SITE 174-174 ACT_SITE 250-250 ACT_SITE 368-368 BINDING 110-110 BINDING 214-214 BINDING 252-252 BINDING 362-362

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVESNFDGLVGPTHNYSGLSVGNIASKSNQSGVSNPKQAVKQGLEKMKALHDMGFVQG
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLAPQERPDIHTLRRLGFSGSDSEVLKKSYQYSPQLLAACSSASSMWTANAGTVSPSADT
HCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCCC
ADGKVHFTPANLINKFHRSIEDQVTGNILKATFSDEEHFVHHQALPHSDYFGDEGAANHT
CCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHH
RFCREYGEQGVEFFVFGKSAFNESYLAPKKYPARQTLEASEAIARTHGLREQFTVFAQQN
HHHHHHCCCCCEEEEEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEKVKSDLSDSYGSGFNVIEVPTDKVSVQ
CCHHHCCCCCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCHHHH
DAVETYLFNSQLITKADGTTLIILPEHCRQNSRVWAYLNELVEQKCGIDELHTFDLKQSM
HHHHHHHHCCEEEEECCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QNGGGPACLRLRVVLNEAEQKAVNQHTLMSEELFTTLNLWADKHYRDRIEDKDLADPQLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VESRAALDELTQIMHLGSIYPFQK
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKTVESNFDGLVGPTHNYSGLSVGNIASKSNQSGVSNPKQAVKQGLEKMKALHDMGFVQG
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLAPQERPDIHTLRRLGFSGSDSEVLKKSYQYSPQLLAACSSASSMWTANAGTVSPSADT
HCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCCC
ADGKVHFTPANLINKFHRSIEDQVTGNILKATFSDEEHFVHHQALPHSDYFGDEGAANHT
CCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHH
RFCREYGEQGVEFFVFGKSAFNESYLAPKKYPARQTLEASEAIARTHGLREQFTVFAQQN
HHHHHHCCCCCEEEEEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEKVKSDLSDSYGSGFNVIEVPTDKVSVQ
CCHHHCCCCCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCHHHH
DAVETYLFNSQLITKADGTTLIILPEHCRQNSRVWAYLNELVEQKCGIDELHTFDLKQSM
HHHHHHHHCCEEEEECCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QNGGGPACLRLRVVLNEAEQKAVNQHTLMSEELFTTLNLWADKHYRDRIEDKDLADPQLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VESRAALDELTQIMHLGSIYPFQK
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA