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The map label for this gene is viuB [H]

Identifier: 59714006

GI number: 59714006

Start: 925784

End: 926578

Strand: Reverse

Name: viuB [H]

Synonym: VF_A0823

Alternate gene names: 59714006

Gene position: 926578-925784 (Counterclockwise)

Preceding gene: 59714007

Following gene: 59714005

Centisome position: 69.65

GC content: 43.27

Gene sequence:

>795_bases
ATGAGTAATAAACCCTCACCACGAGTGCTGACTGTCTTAAAGAGTGTGCAATTTACTTCTAATATGCAGCGTATTACGTT
TAAAGCTGAAGACCTGTCTGATTTTAATATGGAAAGTGAAGGCGGTTACATCAAGCTGTTGTTTAATGACAATGGCGGAA
CCGATCTTTCTGGTATTCCTGACGGCACTCGTCCAATGATGCGCACTTATACCGTGCGTAATTTGAGAAAAGAGCAGAAT
GAGCTGGATGTCGACTTTGTTCGCCATCATCATGCGAATGCAGCGATGACGTCTGAAACTGGAGGCTTTGCATCTGCTTG
GGCTCAAAATGCCGTTAATGGCGATACGATTTCAATTGCTGGCCCAGGAAGTATCAAAGGATTAAATGCAGAAGCAGATT
GGTTCTTCTTAGTTGCTGATATGACAGCGTTACCGGCATTATCTGCAAAACTTGAAGCTCTGCCTACAACGGCAATAGGT
TATGCGGTTATTGAAATTAACCATTCGTCAGATAAGCAAGATCTAGCGAAACCGCAAGGTATTGAACTTGTATGGGTCAT
TAAATCTGATGAGAAAGGATTAACAGATACGGTTCGCTCACAAGAGTGGAAAGCCGGTCGAGTTGCTGTATGGAGTGCGT
GTGAATTTAACAACATGAGAGCGCTTCGTACGTATTTCCGTAATGAAAAGGAAGTCGATAAAGACGATCTTTATATTAGC
AGCTACTGGAAAGAGGGCTGTACAGAAGATGGACATAAAGTGGCGAAGCACGAAGACCAACTTGCAGAGGGTTAG

Upstream 100 bases:

>100_bases
GAAAAGAGGTGTTGTCTGAAATATATGAAACCGAGTTTGATATCCATGAAGTTAATGGCCAACGTATTTGTATGTATTAC
GGACAATAAAGGATTAAGTT

Downstream 100 bases:

>100_bases
TATCTGCTAGAAGATTCGTGACTAACTTTGAGTGATGCGGCACATTTCTTTTGGTGGATTGCTCCTATACTGATAGGTAA
TCTGATAGAAAAGGAAGTGC

Product: vulnibactin utilization protein ViuB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSNKPSPRVLTVLKSVQFTSNMQRITFKAEDLSDFNMESEGGYIKLLFNDNGGTDLSGIPDGTRPMMRTYTVRNLRKEQN
ELDVDFVRHHHANAAMTSETGGFASAWAQNAVNGDTISIAGPGSIKGLNAEADWFFLVADMTALPALSAKLEALPTTAIG
YAVIEINHSSDKQDLAKPQGIELVWVIKSDEKGLTDTVRSQEWKAGRVAVWSACEFNNMRALRTYFRNEKEVDKDDLYIS
SYWKEGCTEDGHKVAKHEDQLAEG

Sequences:

>Translated_264_residues
MSNKPSPRVLTVLKSVQFTSNMQRITFKAEDLSDFNMESEGGYIKLLFNDNGGTDLSGIPDGTRPMMRTYTVRNLRKEQN
ELDVDFVRHHHANAAMTSETGGFASAWAQNAVNGDTISIAGPGSIKGLNAEADWFFLVADMTALPALSAKLEALPTTAIG
YAVIEINHSSDKQDLAKPQGIELVWVIKSDEKGLTDTVRSQEWKAGRVAVWSACEFNNMRALRTYFRNEKEVDKDDLYIS
SYWKEGCTEDGHKVAKHEDQLAEG
>Mature_263_residues
SNKPSPRVLTVLKSVQFTSNMQRITFKAEDLSDFNMESEGGYIKLLFNDNGGTDLSGIPDGTRPMMRTYTVRNLRKEQNE
LDVDFVRHHHANAAMTSETGGFASAWAQNAVNGDTISIAGPGSIKGLNAEADWFFLVADMTALPALSAKLEALPTTAIGY
AVIEINHSSDKQDLAKPQGIELVWVIKSDEKGLTDTVRSQEWKAGRVAVWSACEFNNMRALRTYFRNEKEVDKDDLYISS
YWKEGCTEDGHKVAKHEDQLAEG

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=248, Percent_Identity=27.0161290322581, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29313; Mature: 29182

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKPSPRVLTVLKSVQFTSNMQRITFKAEDLSDFNMESEGGYIKLLFNDNGGTDLSGIP
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
DGTRPMMRTYTVRNLRKEQNELDVDFVRHHHANAAMTSETGGFASAWAQNAVNGDTISIA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCEEEEE
GPGSIKGLNAEADWFFLVADMTALPALSAKLEALPTTAIGYAVIEINHSSDKQDLAKPQG
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCC
IELVWVIKSDEKGLTDTVRSQEWKAGRVAVWSACEFNNMRALRTYFRNEKEVDKDDLYIS
CEEEEEEECCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEHH
SYWKEGCTEDGHKVAKHEDQLAEG
HHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SNKPSPRVLTVLKSVQFTSNMQRITFKAEDLSDFNMESEGGYIKLLFNDNGGTDLSGIP
CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
DGTRPMMRTYTVRNLRKEQNELDVDFVRHHHANAAMTSETGGFASAWAQNAVNGDTISIA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCEEEEE
GPGSIKGLNAEADWFFLVADMTALPALSAKLEALPTTAIGYAVIEINHSSDKQDLAKPQG
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCC
IELVWVIKSDEKGLTDTVRSQEWKAGRVAVWSACEFNNMRALRTYFRNEKEVDKDDLYIS
CEEEEEEECCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEHH
SYWKEGCTEDGHKVAKHEDQLAEG
HHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]