| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is sspA [C]
Identifier: 59714004
GI number: 59714004
Start: 924577
End: 925287
Strand: Reverse
Name: sspA [C]
Synonym: VF_A0821
Alternate gene names: 59714004
Gene position: 925287-924577 (Counterclockwise)
Preceding gene: 59714005
Following gene: 59714003
Centisome position: 69.55
GC content: 38.4
Gene sequence:
>711_bases ATGATTAAATTAATTAGCTTTAACAATTGCCCATTTGTACAACGTGTAATGGGAGCGTTAGTGACAAAGAATGTGGCGTT TGAAATTGAATACATTGAATTGAATAATAAACCACAGTGGTTCTTGGATATTGCGCCAAATGGTCAAGTGCCAGTATTGA TCACAGAAGATAAGACGGTGTTGTTTGAGTCGGATGCTATTGTTGAATATCTTGATGATAAATACGCGCCAATTGAAGAT CTTACACCAGAACAGCGAGCAATTGATCGTGCATGGTCATATCAAGCGAGTAAGCATTACATGCCGCAATGTGGAACCAT GGGAAGTAAAGACAAAGAAACTTTTGAGACACGTTTGGCTAATCTTTCTAAAGCGTTCGCTAAGGCGGAAGGTAAATTGA GTGATTCATTGTTTTTTAAAGGTGACTATATCTCAAATGTTGATATTGCTTGGCTTCCATTGTTACATCGTGCAGCTGTC ATTAAAGATCAATCAGGGTTTGATATGCTTGATGGCTTCCCTAAAGTTCAAAAATGGCAGGCTTCACTTATTGAATCTGG TCTTGCAGAGAAAACAGTACCGCAAGATTTTGTCGCAACCTTTAGTGGCTTTTATTTAAAAAATACCTATTTAGCTCATG TAATGAATGGTACAGAGGCAGAATGTGCAGAAGGACGCTGTTCAACGGATTCAAGCTCATGCTGTAATTAG
Upstream 100 bases:
>100_bases ATCTTTGATGGGGATTTTTTTTATTAAAATGTCGTCTTTTCTAAATCGGTTTCGTCTTATAGATGTAAATACAAATAACG AACCACTTTGGAGTAACACC
Downstream 100 bases:
>100_bases TTGTATTCATAGCAACAAATAGTAAACTTTAATCAAGGTAACCAACTATTGGTTACCTTAAGTTGTTTGTACCGCCAAAA AATTAGAAAGTATAAAGGTA
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like Protein; Stringent Starvation Protein A; Glutathione S-Transferase Domain; Glutathione-S-Transferase; Glutathione S Transferase; Glutathione-S-Transferase Protein; Glutathione S-Transferase-Like; Glucose-Inhibited Division Protein A Subfamily Protein; Glutathione S-Transferase Family Protein
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MIKLISFNNCPFVQRVMGALVTKNVAFEIEYIELNNKPQWFLDIAPNGQVPVLITEDKTVLFESDAIVEYLDDKYAPIED LTPEQRAIDRAWSYQASKHYMPQCGTMGSKDKETFETRLANLSKAFAKAEGKLSDSLFFKGDYISNVDIAWLPLLHRAAV IKDQSGFDMLDGFPKVQKWQASLIESGLAEKTVPQDFVATFSGFYLKNTYLAHVMNGTEAECAEGRCSTDSSSCCN
Sequences:
>Translated_236_residues MIKLISFNNCPFVQRVMGALVTKNVAFEIEYIELNNKPQWFLDIAPNGQVPVLITEDKTVLFESDAIVEYLDDKYAPIED LTPEQRAIDRAWSYQASKHYMPQCGTMGSKDKETFETRLANLSKAFAKAEGKLSDSLFFKGDYISNVDIAWLPLLHRAAV IKDQSGFDMLDGFPKVQKWQASLIESGLAEKTVPQDFVATFSGFYLKNTYLAHVMNGTEAECAEGRCSTDSSSCCN >Mature_236_residues MIKLISFNNCPFVQRVMGALVTKNVAFEIEYIELNNKPQWFLDIAPNGQVPVLITEDKTVLFESDAIVEYLDDKYAPIED LTPEQRAIDRAWSYQASKHYMPQCGTMGSKDKETFETRLANLSKAFAKAEGKLSDSLFFKGDYISNVDIAWLPLLHRAAV IKDQSGFDMLDGFPKVQKWQASLIESGLAEKTVPQDFVATFSGFYLKNTYLAHVMNGTEAECAEGRCSTDSSSCCN
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758484, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI300360534, Length=181, Percent_Identity=30.939226519337, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI300360532, Length=184, Percent_Identity=29.3478260869565, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1789624, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 26470; Mature: 26470
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLISFNNCPFVQRVMGALVTKNVAFEIEYIELNNKPQWFLDIAPNGQVPVLITEDKTV CEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCEE LFESDAIVEYLDDKYAPIEDLTPEQRAIDRAWSYQASKHYMPQCGTMGSKDKETFETRLA EEECCHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH NLSKAFAKAEGKLSDSLFFKGDYISNVDIAWLPLLHRAAVIKDQSGFDMLDGFPKVQKWQ HHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHH ASLIESGLAEKTVPQDFVATFSGFYLKNTYLAHVMNGTEAECAEGRCSTDSSSCCN HHHHHCCCHHCCCCHHHHHHHHCHHHHHHEEEEECCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MIKLISFNNCPFVQRVMGALVTKNVAFEIEYIELNNKPQWFLDIAPNGQVPVLITEDKTV CEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCEE LFESDAIVEYLDDKYAPIEDLTPEQRAIDRAWSYQASKHYMPQCGTMGSKDKETFETRLA EEECCHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH NLSKAFAKAEGKLSDSLFFKGDYISNVDIAWLPLLHRAAVIKDQSGFDMLDGFPKVQKWQ HHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHH ASLIESGLAEKTVPQDFVATFSGFYLKNTYLAHVMNGTEAECAEGRCSTDSSSCCN HHHHHCCCHHCCCCHHHHHHHHCHHHHHHEEEEECCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA