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The map label for this gene is glgC

Identifier: 59713989

GI number: 59713989

Start: 906081

End: 907298

Strand: Reverse

Name: glgC

Synonym: VF_A0806

Alternate gene names: 59713989

Gene position: 907298-906081 (Counterclockwise)

Preceding gene: 59713991

Following gene: 59713988

Centisome position: 68.2

GC content: 37.44

Gene sequence:

>1218_bases
ATGGCTGGTGTATTAGGGATGATTTTGGCTGGTGGTGAAGGCTCACGTCTACGCCCATTAACGGAATCAAGAACCAAACC
TGCAGTACCATTTGGTGGCAGTTATCGCTTAATTGATTTTGCATTAAATAATTTTGTAAATGCTGATTTAATGCGAATTT
ATGTATTAACTCAATTTAAATCTCAATCACTTTTTCAACATATGAAAAAAGGTTGGAATGTAAATGGAATAACAGATCGC
TTTATTGATCCTGTTCCTGCTCAAATGCGAACAGGTAAGCGTTGGTATGAAGGGACGGCGGATGCTATATATCAAAATAT
CAGTTTTATAGAATCAACAGATCCTGAACATGTATGTATTTTCGGTTCTGATCATATTTATAAAATGGATATTCGCCAAA
TGCTTGATTTTCATAAAAAGAAAAAAGCAGCATTAACGGTATCAGCACTACGCATGCCTGCAAAAGATGCCTCTGGCTTT
GGTGTTATTGAAGTTGATGAACATGGCAAAATGATCGGCTTTGAAGAAAAACCATCGAATCCTAAATGTATCCCGGGCCA
ACCTGGCATCGCTTTGGTATCAATGGGTAACTACATTTTTGAAGCAGAGAGTCTTTGTAAAGAATTGATCCATGATGCGG
CGCTTGAAGATTCTTCTCATGACTTTGGTAAAGATATCATTCCTAAAATGTTTCCAGAAGGGAATGTTTACGTTTACGAT
TTTAGTACAAATCATATTAAAGGTGAAAAGAAAGAGGTTTACTGGCGTGATGTAGGTACGATTGAATCGTATTGGGAAGC
TCATATGGACCTATTAAAGAAAGATGCTCCATTTTCTTTATATAACCGCAAATGGCCACTTCATACTTATTATCCTCCAT
TACCACCTGCGACTTTCTCTGATTCAGATAATGGTCGAGTGCAGATTATTGATAGTCTCGTTTGTGGTGGTAGCTATATC
CGTGGTTCACGTATTGAAAAATCAGTACTGGGTTTTAGAAGTAATATTGCATCCGCTTGTGATATTAGTGAAAGTATTTT
GTTAGGTAATGTGAAAGTCGGTAAAGGTTGTGTTTTGCGCCGAGTGATTGTCGATAAAGGTGCAGATATAGCTCCAGGAA
CTGAAATTGGTGTAAACCTTCAAGAAGATAAGAAAAGATACCACGTATCAGATGAGGGTATTGTTGTTATCCCTAAAGGA
GAGAGAGTTGGTTACTAA

Upstream 100 bases:

>100_bases
AAACATTTCACAGATTTGTAAATAATTTATGTTAACTTAATCTCAAAATAAAGAATTCAAGAAATTCTATCTATATTAAT
AATAATCTCAGGGAGAACAC

Downstream 100 bases:

>100_bases
GACGCTATCAATTGTATTTGTAGCATCTGAAGTTGACGGGTTAATAAAAAGTGGAGGCTTGGCAGATGTTGCCAAGGCTC
TGCCTAAGTCATTAAAAGAG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDR
FIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGF
GVIEVDEHGKMIGFEEKPSNPKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYD
FSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYI
RGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKG
ERVGY

Sequences:

>Translated_405_residues
MAGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDR
FIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGF
GVIEVDEHGKMIGFEEKPSNPKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYD
FSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYI
RGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKG
ERVGY
>Mature_404_residues
AGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDRF
IDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFG
VIEVDEHGKMIGFEEKPSNPKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDF
STNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIR
GSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKGE
RVGY

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=399, Percent_Identity=44.6115288220551, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_VIBF1 (Q5DZC0)

Other databases:

- EMBL:   CP000021
- RefSeq:   YP_206764.1
- ProteinModelPortal:   Q5DZC0
- SMR:   Q5DZC0
- STRING:   Q5DZC0
- GeneID:   3280602
- GenomeReviews:   CP000021_GR
- KEGG:   vfi:VF_A0806
- NMPDR:   fig|312309.3.peg.3723
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- OMA:   SLYNRKW
- PhylomeDB:   Q5DZC0
- ProtClustDB:   PRK00844
- BioCyc:   VFIS312309:VFA0806-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 45212; Mature: 45081

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFK
CCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHCCHHHEEEEEHHHHH
SQSLFQHMKKGWNVNGITDRFIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCI
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCEEEE
FGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSN
ECCCCEEEHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCC
PKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYD
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE
FSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFS
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC
DSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLR
CCCCCEEEEEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECEEECCCHHHH
RVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKGERVGY
HHHHHCCCCCCCCCCCCCCCHHCCHHEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
AGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFK
CCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHCCHHHEEEEEHHHHH
SQSLFQHMKKGWNVNGITDRFIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCI
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCEEEE
FGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSN
ECCCCEEEHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCC
PKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYD
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE
FSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFS
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC
DSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLR
CCCCCEEEEEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECEEECCCHHHH
RVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKGERVGY
HHHHHCCCCCCCCCCCCCCCHHCCHHEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA