| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is fhuB [H]
Identifier: 59713964
GI number: 59713964
Start: 873877
End: 875892
Strand: Reverse
Name: fhuB [H]
Synonym: VF_A0781
Alternate gene names: 59713964
Gene position: 875892-873877 (Counterclockwise)
Preceding gene: 59713965
Following gene: 59713963
Centisome position: 65.84
GC content: 39.53
Gene sequence:
>2016_bases ATGCCTAATTCATTTATTACCACTCCCATTAGATATTTATTGGCTTTTATTTCGCTATTTCTTGTTGTGTGGATGTCATT TCAATGGAATGCAACGTTGAGTTTGCCTCAACAAATTGATGCGATACTACAAGTCATTAGTAACCCTTCTTCATTAGATG ATTTTGATAAGATAATTTTTATTGAATCACAATTACCACGTTTGGTAATGGCTATTTTAATTGGAGGGATGTTGGGCTTA GTGGGTAGTTTGATGCAACAATTAACTCAAAACTCACTTGTGTCGCCAATGACGTTAGGTGCGGCTTCTGGTGCATGGTT AGCGCTCGTTGTAATGAATGTATGGTTTGCTGACTATGTTGCAGATTATGCTTCAATAGCTGCATTATTTGGTGCCTTAA TTACTTTTGCATTGGTTGTTGCGATCGCCGGAGTTAATAATTTATCTGGGCTACCAATTGTACTCTCTGGTATGGCAGTT AATATTTTCCTGGGTGCAGTAGCGACGGCAATTATTTTACTAAATGATCAGTATGCGAAGAATTTGTTTATTTGGGGAGC TGGTGATTTAGCTCAAAATGGATGGGAGCAAGTGCAATGGTTACTTCCTAAACTTTCTGTTTCTCTACTTATATTTGTTT TTGCCCCAAGAATTCTTGCGTTACTACGATTAGGTAATGTAGGTGCTGCCGCTCGTGGTTTAAATGTTATCCCTGCTTTC TTTGGACTGTTTGCCTTAGGCTTGTGGTTAGTCGCTTCGTCAATAACAACGGTGGGGGTAATTAGTTTTATCGGTTTATT AGCCCCGAATATTGCTCGTCATCTAGGAGCAAGAACCCCAAGAGATGAATTGTTTTTTAGTTTGTTATTAGGGGTAACTC TTTTAGTTGGTACTGATCTTTTAGCTAGTATTATCAGCCAATACACAACTGATATTGTACCAAGCGGAACAGCGGCAGCG TTGATTGGAGCGCCCGCATTGATTTGGTTTACACGTCGAACCATGAGTTCACAAGATCAATTGTCGATTAGCTTGCCAAA AGGAAAATCAATATTACCAATATGGCTAATTCCTTCGTTGGGCTTTGGTTTAATTGTGGTGTTATTTTTGGCCGTGATAG TAACAAAAGATTCGACTCAAACACTTCATCCATGGACAGTTCTTATTCCAAGTGAATTTAGTTGGGAGTTGAAGTGGCCA AGATTATTAACTGCATTATCTGCAGGCTCTGGTTTAGCGGTTGCAGGAGTGTTGTTGCAAAGACTGATTTATAATCCGTT AGCGAGCCCTGATATTTTGGGAATTTCTGCGGGAGCAACTTTTGCACTGATTGGCGGTAGTGTTTTCTTAGGATTTAATA TTTTTGAGGCTGCACCATTAGTTGCCTTTTGTGGAAGTTTAACGGTTTTAGTTTTGCTACTAATTTTAGGTAAACGACAT GGGTATGCTCCCTCTATGCTGATTTTAACAGGGATAGCATTAACAGCCTTAATTGATGCGTTAGTTCAGTTCTCATTAGC CAAGGGGAATGAAGATTCGTACATTTTGCTTAATTGGCTTGCAGGTTCTACGTATCGAGTATCGGCGCAATCAGCGTTGA TATTGTTTGTTTGTATCGTTTTATTACTGATGTTTGCTTTGCTGACACATCGCTGGTTAACGTTAATTTCAGCAGGACGG TTGTTTGCACAAGCGAGAGGATTAAGCGTAACTAAGAGTTTTATCGCATTGCTTATTTGTGTTGCATTACTTTGTGGTGC GGTTACTGCTACCATGGGGCCTGTTGCTTTTATTGGCTTATTGGCTCCTCATATGGCGGTTATTTTAGGCGCTAAAAAAG CCAAAGAACAAATCATTGTTGCGGCATTGATTGGAGCATTATTAATGATTATTGCGGATTGGTTCGGTCAGCATATTTTG TTCCCATCCCAAATAGCTGCCGGAACATTAGTTTCAGTGATCGGAGGGCTGTATTTTATTGGTTTGCTGATAAAAGGGCA GCGTTCTAAATATTAA
Upstream 100 bases:
>100_bases GTGGGGCAATGTCGATTAAATATACTGCAAAGGCACTGGCTAAAAGTTTGCTAGAGATAGCACCTCAATCAAAAATGTTG AGCAATAGTGTTAAGTAATT
Downstream 100 bases:
>100_bases GGACTTATAGAGTTCACTCATGGCTAACCTGTAAAGGTAGTAGCTAAACTATTTTTAATAAAGAATTTGATTATGATGAA AAAAGCATTGTTGTTGATAG
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MPNSFITTPIRYLLAFISLFLVVWMSFQWNATLSLPQQIDAILQVISNPSSLDDFDKIIFIESQLPRLVMAILIGGMLGL VGSLMQQLTQNSLVSPMTLGAASGAWLALVVMNVWFADYVADYASIAALFGALITFALVVAIAGVNNLSGLPIVLSGMAV NIFLGAVATAIILLNDQYAKNLFIWGAGDLAQNGWEQVQWLLPKLSVSLLIFVFAPRILALLRLGNVGAAARGLNVIPAF FGLFALGLWLVASSITTVGVISFIGLLAPNIARHLGARTPRDELFFSLLLGVTLLVGTDLLASIISQYTTDIVPSGTAAA LIGAPALIWFTRRTMSSQDQLSISLPKGKSILPIWLIPSLGFGLIVVLFLAVIVTKDSTQTLHPWTVLIPSEFSWELKWP RLLTALSAGSGLAVAGVLLQRLIYNPLASPDILGISAGATFALIGGSVFLGFNIFEAAPLVAFCGSLTVLVLLLILGKRH GYAPSMLILTGIALTALIDALVQFSLAKGNEDSYILLNWLAGSTYRVSAQSALILFVCIVLLLMFALLTHRWLTLISAGR LFAQARGLSVTKSFIALLICVALLCGAVTATMGPVAFIGLLAPHMAVILGAKKAKEQIIVAALIGALLMIIADWFGQHIL FPSQIAAGTLVSVIGGLYFIGLLIKGQRSKY
Sequences:
>Translated_671_residues MPNSFITTPIRYLLAFISLFLVVWMSFQWNATLSLPQQIDAILQVISNPSSLDDFDKIIFIESQLPRLVMAILIGGMLGL VGSLMQQLTQNSLVSPMTLGAASGAWLALVVMNVWFADYVADYASIAALFGALITFALVVAIAGVNNLSGLPIVLSGMAV NIFLGAVATAIILLNDQYAKNLFIWGAGDLAQNGWEQVQWLLPKLSVSLLIFVFAPRILALLRLGNVGAAARGLNVIPAF FGLFALGLWLVASSITTVGVISFIGLLAPNIARHLGARTPRDELFFSLLLGVTLLVGTDLLASIISQYTTDIVPSGTAAA LIGAPALIWFTRRTMSSQDQLSISLPKGKSILPIWLIPSLGFGLIVVLFLAVIVTKDSTQTLHPWTVLIPSEFSWELKWP RLLTALSAGSGLAVAGVLLQRLIYNPLASPDILGISAGATFALIGGSVFLGFNIFEAAPLVAFCGSLTVLVLLLILGKRH GYAPSMLILTGIALTALIDALVQFSLAKGNEDSYILLNWLAGSTYRVSAQSALILFVCIVLLLMFALLTHRWLTLISAGR LFAQARGLSVTKSFIALLICVALLCGAVTATMGPVAFIGLLAPHMAVILGAKKAKEQIIVAALIGALLMIIADWFGQHIL FPSQIAAGTLVSVIGGLYFIGLLIKGQRSKY >Mature_670_residues PNSFITTPIRYLLAFISLFLVVWMSFQWNATLSLPQQIDAILQVISNPSSLDDFDKIIFIESQLPRLVMAILIGGMLGLV GSLMQQLTQNSLVSPMTLGAASGAWLALVVMNVWFADYVADYASIAALFGALITFALVVAIAGVNNLSGLPIVLSGMAVN IFLGAVATAIILLNDQYAKNLFIWGAGDLAQNGWEQVQWLLPKLSVSLLIFVFAPRILALLRLGNVGAAARGLNVIPAFF GLFALGLWLVASSITTVGVISFIGLLAPNIARHLGARTPRDELFFSLLLGVTLLVGTDLLASIISQYTTDIVPSGTAAAL IGAPALIWFTRRTMSSQDQLSISLPKGKSILPIWLIPSLGFGLIVVLFLAVIVTKDSTQTLHPWTVLIPSEFSWELKWPR LLTALSAGSGLAVAGVLLQRLIYNPLASPDILGISAGATFALIGGSVFLGFNIFEAAPLVAFCGSLTVLVLLLILGKRHG YAPSMLILTGIALTALIDALVQFSLAKGNEDSYILLNWLAGSTYRVSAQSALILFVCIVLLLMFALLTHRWLTLISAGRL FAQARGLSVTKSFIALLICVALLCGAVTATMGPVAFIGLLAPHMAVILGAKKAKEQIIVAALIGALLMIIADWFGQHILF PSQIAAGTLVSVIGGLYFIGLLIKGQRSKY
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=666, Percent_Identity=33.6336336336336, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI1790740, Length=271, Percent_Identity=37.6383763837638, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1790741, Length=297, Percent_Identity=32.6599326599327, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI1786805, Length=253, Percent_Identity=31.6205533596838, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786804, Length=280, Percent_Identity=34.6428571428571, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1788004, Length=226, Percent_Identity=30.0884955752212, Blast_Score=82, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 71449; Mature: 71317
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSFITTPIRYLLAFISLFLVVWMSFQWNATLSLPQQIDAILQVISNPSSLDDFDKIIF CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHCCCCCCCCHHHEEE IESQLPRLVMAILIGGMLGLVGSLMQQLTQNSLVSPMTLGAASGAWLALVVMNVWFADYV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHH ADYASIAALFGALITFALVVAIAGVNNLSGLPIVLSGMAVNIFLGAVATAIILLNDQYAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHC NLFIWGAGDLAQNGWEQVQWLLPKLSVSLLIFVFAPRILALLRLGNVGAAARGLNVIPAF CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH FGLFALGLWLVASSITTVGVISFIGLLAPNIARHLGARTPRDELFFSLLLGVTLLVGTDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LASIISQYTTDIVPSGTAAALIGAPALIWFTRRTMSSQDQLSISLPKGKSILPIWLIPSL HHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEHHHC GFGLIVVLFLAVIVTKDSTQTLHPWTVLIPSEFSWELKWPRLLTALSAGSGLAVAGVLLQ HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH RLIYNPLASPDILGISAGATFALIGGSVFLGFNIFEAAPLVAFCGSLTVLVLLLILGKRH HHHHCCCCCCCCEEECCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYAPSMLILTGIALTALIDALVQFSLAKGNEDSYILLNWLAGSTYRVSAQSALILFVCIV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECHHHHHHHHHHHH LLLMFALLTHRWLTLISAGRLFAQARGLSVTKSFIALLICVALLCGAVTATMGPVAFIGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPHMAVILGAKKAKEQIIVAALIGALLMIIADWFGQHILFPSQIAAGTLVSVIGGLYFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GLLIKGQRSKY HHHHCCCCCCC >Mature Secondary Structure PNSFITTPIRYLLAFISLFLVVWMSFQWNATLSLPQQIDAILQVISNPSSLDDFDKIIF CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHCCCCCCCCHHHEEE IESQLPRLVMAILIGGMLGLVGSLMQQLTQNSLVSPMTLGAASGAWLALVVMNVWFADYV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHH ADYASIAALFGALITFALVVAIAGVNNLSGLPIVLSGMAVNIFLGAVATAIILLNDQYAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHC NLFIWGAGDLAQNGWEQVQWLLPKLSVSLLIFVFAPRILALLRLGNVGAAARGLNVIPAF CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH FGLFALGLWLVASSITTVGVISFIGLLAPNIARHLGARTPRDELFFSLLLGVTLLVGTDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LASIISQYTTDIVPSGTAAALIGAPALIWFTRRTMSSQDQLSISLPKGKSILPIWLIPSL HHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEHHHC GFGLIVVLFLAVIVTKDSTQTLHPWTVLIPSEFSWELKWPRLLTALSAGSGLAVAGVLLQ HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH RLIYNPLASPDILGISAGATFALIGGSVFLGFNIFEAAPLVAFCGSLTVLVLLLILGKRH HHHHCCCCCCCCEEECCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYAPSMLILTGIALTALIDALVQFSLAKGNEDSYILLNWLAGSTYRVSAQSALILFVCIV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECHHHHHHHHHHHH LLLMFALLTHRWLTLISAGRLFAQARGLSVTKSFIALLICVALLCGAVTATMGPVAFIGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPHMAVILGAKKAKEQIIVAALIGALLMIIADWFGQHILFPSQIAAGTLVSVIGGLYFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GLLIKGQRSKY HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]