Click here to switch to the map view.

The map label for this gene is exbB [C]

Identifier: 59713962

GI number: 59713962

Start: 871689

End: 873041

Strand: Reverse

Name: exbB [C]

Synonym: VF_A0779

Alternate gene names: 59713962

Gene position: 873041-871689 (Counterclockwise)

Preceding gene: 59713963

Following gene: 59713961

Centisome position: 65.63

GC content: 38.65

Gene sequence:

>1353_bases
ATGAATTATGTAGTAAAACTTCTTTGCATCGGTTTATTAAGTCTTTCGTTTACTGCGAGTGCTCAAAGTGAGTTAACAAA
GAGTGCACAAACCCATAATAAAGAACAAGCAACACATAATGCTCAAAGAGAGTCTGGTTTTAAATTAACAGAGAAAGAAT
ACTTAGCTCAAAAGAAAGCGCTAGAAGAGCGTAAACGCAAGGTTCAAAATCAAATCGATATGCTAGCTAAAACTTTCAGT
AAAAACGAAGGTGAATTAGCTAAACAAGAAGAAAAACTACGCTTAGATACAGGGAGCTTAGGTGAGCTATTTGGCGTGGT
TAGACAAGCGGCAAAAGAATTAGAAAGTGAAAACCAAACTAGTGTTACTGGAGCGGATAGCACGCAATATTCGCAGGCGG
TCACAAGCATCGTTGCTGCAAAAACATTACCTACGTTACCTCAGTTAACGGATCTATGGCTAAGTATGAATGAGCAGATC
CAAGCAAGTGCTGAACTAAAAGAATCAGAGGTAAAGGTGATTGATGGAGAAGGGAATATTGCTTCACAGTTGGCGTACCG
TATTGGTTCTATTGGCTTAATCTCTGAGCAAGGTTATTTACATTGGGATGGTAAACGTCAAGACGCCACTTATTACAGTA
AACAACCTGAAAATGGACCAAGGCTAAACTCTCTATCTGAACTGTCAGAAGGAAATGTCGAGACTATGATTGTCGATCCT
TCAAGAGGTTTTATGCTAGATCAATTAGCACTAACGCCAAGTTTATTTGAGAGATTACAAGCAGGTGGTGTAGTTGGTCA
GATTATTCTTACCTTACTTGTTATCGGTTTAATTATTGCGATATTTAGAGGAAGTAAACTTGCTCTTGTACAGCAGCAGA
TCAAAAAGCAGTTAAAGACACCCGAAACCCCTACAGATAACCCATTAGGAAGAATTTTATCTGTTTATGATGAAGAAAAG
CATCGTAATGTAGAGTCTCTTGAATTACGACTATTAGAAGCGATAGTCGATGAACAGCAAGGACTTGAAAAAGGTCTTTC
AATGCTCAAGCTACTTGCTGCACTAGCACCGATGTTAGGGCTATTAGGAACCGTAACAGGCATGATTGAAACTTTCCAAG
TGATTACTCAGTTTGGTAATGGTGACCCTAAAGTGATGGCTGGGGGAATATCCATGGCACTTGTTACTACTGTTCTTGGT
TTAGTCGCAGCAATGCCATTACTATTTGCACACAATATCTTAAGTACTCAAGCTGAAAATGTTCGTAGTATTTTAGAAAA
ACAAGGTATTGGTTTAGTGGCGATTCAAGCTGAAAAACAACAAGCAAAATCGACTGTAGGAAATGAGATCTAA

Upstream 100 bases:

>100_bases
AATTCTGAGTTAGATAAAGCTTATGCGGTAGCAAATAAAGAAATCGCCCCAAGTTTGCTTACTTTACCTGTATCACTAAA
TATTGCGGAGAAGAAATAAA

Downstream 100 bases:

>100_bases
TGGCAGTGTCATGGCTACATAATTGGCTTGATACCTTAATGCAGTTTATGGAGCAGGGCGGACACATTCTGTGGTGGCTT
GCTGCTGTTGTAATTGTATG

Product: TolQ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNYVVKLLCIGLLSLSFTASAQSELTKSAQTHNKEQATHNAQRESGFKLTEKEYLAQKKALEERKRKVQNQIDMLAKTFS
KNEGELAKQEEKLRLDTGSLGELFGVVRQAAKELESENQTSVTGADSTQYSQAVTSIVAAKTLPTLPQLTDLWLSMNEQI
QASAELKESEVKVIDGEGNIASQLAYRIGSIGLISEQGYLHWDGKRQDATYYSKQPENGPRLNSLSELSEGNVETMIVDP
SRGFMLDQLALTPSLFERLQAGGVVGQIILTLLVIGLIIAIFRGSKLALVQQQIKKQLKTPETPTDNPLGRILSVYDEEK
HRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLG
LVAAMPLLFAHNILSTQAENVRSILEKQGIGLVAIQAEKQQAKSTVGNEI

Sequences:

>Translated_450_residues
MNYVVKLLCIGLLSLSFTASAQSELTKSAQTHNKEQATHNAQRESGFKLTEKEYLAQKKALEERKRKVQNQIDMLAKTFS
KNEGELAKQEEKLRLDTGSLGELFGVVRQAAKELESENQTSVTGADSTQYSQAVTSIVAAKTLPTLPQLTDLWLSMNEQI
QASAELKESEVKVIDGEGNIASQLAYRIGSIGLISEQGYLHWDGKRQDATYYSKQPENGPRLNSLSELSEGNVETMIVDP
SRGFMLDQLALTPSLFERLQAGGVVGQIILTLLVIGLIIAIFRGSKLALVQQQIKKQLKTPETPTDNPLGRILSVYDEEK
HRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLG
LVAAMPLLFAHNILSTQAENVRSILEKQGIGLVAIQAEKQQAKSTVGNEI
>Mature_450_residues
MNYVVKLLCIGLLSLSFTASAQSELTKSAQTHNKEQATHNAQRESGFKLTEKEYLAQKKALEERKRKVQNQIDMLAKTFS
KNEGELAKQEEKLRLDTGSLGELFGVVRQAAKELESENQTSVTGADSTQYSQAVTSIVAAKTLPTLPQLTDLWLSMNEQI
QASAELKESEVKVIDGEGNIASQLAYRIGSIGLISEQGYLHWDGKRQDATYYSKQPENGPRLNSLSELSEGNVETMIVDP
SRGFMLDQLALTPSLFERLQAGGVVGQIILTLLVIGLIIAIFRGSKLALVQQQIKKQLKTPETPTDNPLGRILSVYDEEK
HRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLG
LVAAMPLLFAHNILSTQAENVRSILEKQGIGLVAIQAEKQQAKSTVGNEI

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 49102; Mature: 49102

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVVKLLCIGLLSLSFTASAQSELTKSAQTHNKEQATHNAQRESGFKLTEKEYLAQKKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEERKRKVQNQIDMLAKTFSKNEGELAKQEEKLRLDTGSLGELFGVVRQAAKELESENQT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
SVTGADSTQYSQAVTSIVAAKTLPTLPQLTDLWLSMNEQIQASAELKESEVKVIDGEGNI
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCH
ASQLAYRIGSIGLISEQGYLHWDGKRQDATYYSKQPENGPRLNSLSELSEGNVETMIVDP
HHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECC
SRGFMLDQLALTPSLFERLQAGGVVGQIILTLLVIGLIIAIFRGSKLALVQQQIKKQLKT
CCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PETPTDNPLGRILSVYDEEKHRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLFAHNILSTQAEN
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSILEKQGIGLVAIQAEKQQAKSTVGNEI
HHHHHHHCCCCEEEEECHHHHHHHHCCCCC
>Mature Secondary Structure
MNYVVKLLCIGLLSLSFTASAQSELTKSAQTHNKEQATHNAQRESGFKLTEKEYLAQKKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEERKRKVQNQIDMLAKTFSKNEGELAKQEEKLRLDTGSLGELFGVVRQAAKELESENQT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
SVTGADSTQYSQAVTSIVAAKTLPTLPQLTDLWLSMNEQIQASAELKESEVKVIDGEGNI
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCH
ASQLAYRIGSIGLISEQGYLHWDGKRQDATYYSKQPENGPRLNSLSELSEGNVETMIVDP
HHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECC
SRGFMLDQLALTPSLFERLQAGGVVGQIILTLLVIGLIIAIFRGSKLALVQQQIKKQLKT
CCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PETPTDNPLGRILSVYDEEKHRNVESLELRLLEAIVDEQQGLEKGLSMLKLLAALAPMLG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLFAHNILSTQAEN
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSILEKQGIGLVAIQAEKQQAKSTVGNEI
HHHHHHHCCCCEEEEECHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]