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The map label for this gene is ybiI [H]

Identifier: 59713923

GI number: 59713923

Start: 836414

End: 836683

Strand: Reverse

Name: ybiI [H]

Synonym: VF_A0740

Alternate gene names: 59713923

Gene position: 836683-836414 (Counterclockwise)

Preceding gene: 59713924

Following gene: 59713921

Centisome position: 62.89

GC content: 40.74

Gene sequence:

>270_bases
ATGGCTAATGGATTTACAAGAGATGGTGGCGTTCAAGAACAAATAGATGCCACTGTAATTGATGCAATTAACCGTGCTCG
TTCGCATCTTCATCATGAGCACAATGATACGAATTATTGTTTAGAGTGTGGGGAATTAATTCCAGAAGCACGACGAAACA
TAATACCAGGTGTAGAGCTGTGTGTTGAATGTCAGGCAAAAGAAGATGCGCGTGAAAAAGCATTCAGTGCTTATAACCGC
AGAGCAAGTAAAGACAGTCAATTACGCTAA

Upstream 100 bases:

>100_bases
ACACAACTGTAATAGTAATTCACATTTGGCGCTATTATCAGAGTACTGTAAATAATAGATAATGCTCTCCTAGTCGTTAT
TTCATTAACTGGAGACCATT

Downstream 100 bases:

>100_bases
GTATGGCGGTTGCTCCTAATATTCAGAAACAGACCGCCACGTTTAATTAAGTTTGCTACCAAAAAGAAGAGAGAAGTTAG
TTACGATTAATGCGAGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MANGFTRDGGVQEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAREKAFSAYNR
RASKDSQLR

Sequences:

>Translated_89_residues
MANGFTRDGGVQEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAREKAFSAYNR
RASKDSQLR
>Mature_88_residues
ANGFTRDGGVQEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAREKAFSAYNRR
ASKDSQLR

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1787022, Length=89, Percent_Identity=50.561797752809, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 10054; Mature: 9923

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANGFTRDGGVQEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
CVECQAKEDAREKAFSAYNRRASKDSQLR
HHHCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ANGFTRDGGVQEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
CVECQAKEDAREKAFSAYNRRASKDSQLR
HHHCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]