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The map label for this gene is ylbK [H]

Identifier: 59713897

GI number: 59713897

Start: 801099

End: 803417

Strand: Reverse

Name: ylbK [H]

Synonym: VF_A0714

Alternate gene names: 59713897

Gene position: 803417-801099 (Counterclockwise)

Preceding gene: 59713899

Following gene: 59713895

Centisome position: 60.39

GC content: 38.98

Gene sequence:

>2319_bases
ATGATTATTCTTATCTGGATGGTGATTATGCGTCATGTTTTTCGCTTGAACTTATGGTTTGTTTTTTTAGCTACATTTCT
TTTTACGCCGTATTTATATGCAGAGCCAATAAAAGAACCATCTCGCCCTAAAATTGCTTTGGTACTTGCTGGTGGTGGTG
CAAAAGGAGCGGCGCACATTGGCGTATTAAAAGCGCTTGAAGAGTTAAATATACCCATAGATATTATTACAGGAACCAGT
ATGGGGGCGTATGTCGGTGGGCTTTATGCAACAGGGAAATCGGCCTCTGAGATTGAAGCGTATTTGCATACCGTAGATTG
GTACAGTGGCTATCAAGATGAGGTTGGCAGAGAAGAGAAAAATAGTCGAGATAAAAAGTACGAAGACAGATTTGCAATAA
ATCCATCGCTAGGAATCAGAAAAGAGGGAGTAAAATCACCAAAGTCAGCGATTCAAGGACAGAATATGCTTAAGATTTTA
CGTGAAACATCTGGTAATCCCGTGTCCGTTGCATCGTTTGATGATTTCCCTATTCGCTACCGTTCAGTTGCGACTGATAT
TGTTTCAATGGAAGAAGTGGTTATTGACCATGGTCTTTTAGTTGATGCCATGATGGCAAGCATGTCGGTACCCGGCGCCT
TACCACCTTATGAGTTTGAGGATAAGCTGCTTATCGATGGTGGCGTAACCAATAATATGCCTGTTGAACTGGCAAAAGAG
ATGGGGGCGGATATTGTCATCGCGGTGGATATTAGCTCAAATTATATGACTAAAGAGCAGATAGGCTCGTTATTTGATGT
AGCATCTCAATTAACTAATTTTATGGTTAAGCGCAGTACCCAAGAGCAAGCGGAATTTTTAACAGATAAAGATATTTTAT
TGCAGCCTCGTGTTGGTGATATTGAAACGACGGATTTCTCAAGCATGCCAAGAGCGTATCAAGAGGGTTACGATACTGTA
ATGACGCTGAAATCACGTCTGCAATCTTTAGCGGTTGCTCCAAATGAATATGCTCAATACCAAAACAAGATAAAGCAGCA
ATCAGCTAACGTTCGTTTAGCTCAAGGTGCAATCATTGATAAAGTGGAAGTTGAAAATCGAAGTCATTATGAGAGCGACA
AACTAGAGCGTTTTATTCAGTTTGAGCAAGGAACATTGCTTAGCAGTGATTATATTGAAGATAAAATTCACGCTCTATAT
GCAACTAATCGTTTTGAAACCATCACTTATTTAGTTGAAGAAGATAACAATGAAAATGTATTGAAAGTGACCGCTAAAGA
GAAAGAGTGGGGGCCCAATTACTTAAATTTTCGTTTTTTCTTAGAAGAGGATTTTGATACGCACAGTCAATATGGTCTTG
GTGCTTCAATTAATTTTACCGATTTAAACGATTATGGTGCTGAATTACGTACAAATGTTGAATTAGGTACAGATAAGATA
TTTGATGCGACCATCCATTATCCTTTTTATCTGAATCATCATTTCTTTGTGCAATCAAACATGATGTATAGCGATAAAAA
ACGCTCAATTTCAACAAGCAGTTTAGAAGATAAAGAGCCAAACAGCAGCATGAGCTTTTATCCTGTTAATCTTCGAGATT
TTACCGTCGATGCTTTGTTTGGTGTAGAAGCAACAAAAGATCAGCAGTTAAAAACAGGGATCTTATATGCAAGAGGAAGC
CATGAATTAACCGGACTTTCAGCGTATGGAAGAACGGAATATGAACGCTTAGGTGCAACGCTCGAATACAATTTTGATAG
TTTAGACAGTATTTCATTGCCAACGCATGGTTCGTTAATAAATGCACGTTACCTATATGCGTTCGATAAGGTAAATAGCC
GTGATGTAGAAGGCTCTGATCATTCAGAACAATACATTGATGAATTTACAGCAGAAGCGCTATTTGCCAGAAGCATTGCA
AGACACACTTTCATTAGTAGTGCGGAATATGGCATAACGAACAGTGATGATTACTTGGTTCCAGTTAATCCGATTGAGCT
TGGCGGGTTTAATCACTTATCAGGCTTGCCACGAAATAGCTTGATTGGTGCAAATAAAATTTATGGTCGCTTAACTTATC
GATACCGTTGGTTTGAGAATGATTTAGGCATGTTTAAAACAGCGGTTTATTTGGGGGCTTCAGCAGAATACGGTGGTTTA
TGGTCAATGAAATCAACAGACATTAGCTCCGCACCGCTTATTTTCTCTGGTTCATTGTTTGGAGGAATAGACACGCCTAT
TGGGCCGATTATTCTGTCTTATGGACGAGCAGAAAATGGTTTAGATTCTGTGTATCTGATTGTTGGAAATGTTGAATAA

Upstream 100 bases:

>100_bases
GAGTGATGGAGGTTTTTTATATTAATAAATTTAGCTCTTAATCACTTCGTTACCCCGATCAAATTCTGCTTTTTTAAACC
TGATATTCTTATGAAAATTA

Downstream 100 bases:

>100_bases
GCGTGGAGATGATTAACGGTTTTAAGGTCAGGGTTGATTAAGATATTACAATCAACCCTGACTGAGTTTACGCTTTTGAA
AAACGCTTGTGATGTTTCGT

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MIILIWMVIMRHVFRLNLWFVFLATFLFTPYLYAEPIKEPSRPKIALVLAGGGAKGAAHIGVLKALEELNIPIDIITGTS
MGAYVGGLYATGKSASEIEAYLHTVDWYSGYQDEVGREEKNSRDKKYEDRFAINPSLGIRKEGVKSPKSAIQGQNMLKIL
RETSGNPVSVASFDDFPIRYRSVATDIVSMEEVVIDHGLLVDAMMASMSVPGALPPYEFEDKLLIDGGVTNNMPVELAKE
MGADIVIAVDISSNYMTKEQIGSLFDVASQLTNFMVKRSTQEQAEFLTDKDILLQPRVGDIETTDFSSMPRAYQEGYDTV
MTLKSRLQSLAVAPNEYAQYQNKIKQQSANVRLAQGAIIDKVEVENRSHYESDKLERFIQFEQGTLLSSDYIEDKIHALY
ATNRFETITYLVEEDNNENVLKVTAKEKEWGPNYLNFRFFLEEDFDTHSQYGLGASINFTDLNDYGAELRTNVELGTDKI
FDATIHYPFYLNHHFFVQSNMMYSDKKRSISTSSLEDKEPNSSMSFYPVNLRDFTVDALFGVEATKDQQLKTGILYARGS
HELTGLSAYGRTEYERLGATLEYNFDSLDSISLPTHGSLINARYLYAFDKVNSRDVEGSDHSEQYIDEFTAEALFARSIA
RHTFISSAEYGITNSDDYLVPVNPIELGGFNHLSGLPRNSLIGANKIYGRLTYRYRWFENDLGMFKTAVYLGASAEYGGL
WSMKSTDISSAPLIFSGSLFGGIDTPIGPIILSYGRAENGLDSVYLIVGNVE

Sequences:

>Translated_772_residues
MIILIWMVIMRHVFRLNLWFVFLATFLFTPYLYAEPIKEPSRPKIALVLAGGGAKGAAHIGVLKALEELNIPIDIITGTS
MGAYVGGLYATGKSASEIEAYLHTVDWYSGYQDEVGREEKNSRDKKYEDRFAINPSLGIRKEGVKSPKSAIQGQNMLKIL
RETSGNPVSVASFDDFPIRYRSVATDIVSMEEVVIDHGLLVDAMMASMSVPGALPPYEFEDKLLIDGGVTNNMPVELAKE
MGADIVIAVDISSNYMTKEQIGSLFDVASQLTNFMVKRSTQEQAEFLTDKDILLQPRVGDIETTDFSSMPRAYQEGYDTV
MTLKSRLQSLAVAPNEYAQYQNKIKQQSANVRLAQGAIIDKVEVENRSHYESDKLERFIQFEQGTLLSSDYIEDKIHALY
ATNRFETITYLVEEDNNENVLKVTAKEKEWGPNYLNFRFFLEEDFDTHSQYGLGASINFTDLNDYGAELRTNVELGTDKI
FDATIHYPFYLNHHFFVQSNMMYSDKKRSISTSSLEDKEPNSSMSFYPVNLRDFTVDALFGVEATKDQQLKTGILYARGS
HELTGLSAYGRTEYERLGATLEYNFDSLDSISLPTHGSLINARYLYAFDKVNSRDVEGSDHSEQYIDEFTAEALFARSIA
RHTFISSAEYGITNSDDYLVPVNPIELGGFNHLSGLPRNSLIGANKIYGRLTYRYRWFENDLGMFKTAVYLGASAEYGGL
WSMKSTDISSAPLIFSGSLFGGIDTPIGPIILSYGRAENGLDSVYLIVGNVE
>Mature_772_residues
MIILIWMVIMRHVFRLNLWFVFLATFLFTPYLYAEPIKEPSRPKIALVLAGGGAKGAAHIGVLKALEELNIPIDIITGTS
MGAYVGGLYATGKSASEIEAYLHTVDWYSGYQDEVGREEKNSRDKKYEDRFAINPSLGIRKEGVKSPKSAIQGQNMLKIL
RETSGNPVSVASFDDFPIRYRSVATDIVSMEEVVIDHGLLVDAMMASMSVPGALPPYEFEDKLLIDGGVTNNMPVELAKE
MGADIVIAVDISSNYMTKEQIGSLFDVASQLTNFMVKRSTQEQAEFLTDKDILLQPRVGDIETTDFSSMPRAYQEGYDTV
MTLKSRLQSLAVAPNEYAQYQNKIKQQSANVRLAQGAIIDKVEVENRSHYESDKLERFIQFEQGTLLSSDYIEDKIHALY
ATNRFETITYLVEEDNNENVLKVTAKEKEWGPNYLNFRFFLEEDFDTHSQYGLGASINFTDLNDYGAELRTNVELGTDKI
FDATIHYPFYLNHHFFVQSNMMYSDKKRSISTSSLEDKEPNSSMSFYPVNLRDFTVDALFGVEATKDQQLKTGILYARGS
HELTGLSAYGRTEYERLGATLEYNFDSLDSISLPTHGSLINARYLYAFDKVNSRDVEGSDHSEQYIDEFTAEALFARSIA
RHTFISSAEYGITNSDDYLVPVNPIELGGFNHLSGLPRNSLIGANKIYGRLTYRYRWFENDLGMFKTAVYLGASAEYGGL
WSMKSTDISSAPLIFSGSLFGGIDTPIGPIILSYGRAENGLDSVYLIVGNVE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI260656041, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI116256487, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI260656043, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI260656037, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=1e-23,
Organism=Homo sapiens, GI148727335, Length=301, Percent_Identity=28.9036544850498, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI148727290, Length=212, Percent_Identity=33.4905660377358, Blast_Score=103, Evalue=7e-22,
Organism=Escherichia coli, GI226510936, Length=286, Percent_Identity=28.6713286713287, Blast_Score=102, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71997299, Length=194, Percent_Identity=30.9278350515464, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=194, Percent_Identity=30.9278350515464, Blast_Score=75, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=210, Percent_Identity=32.8571428571429, Blast_Score=100, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 86579; Mature: 86579

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILIWMVIMRHVFRLNLWFVFLATFLFTPYLYAEPIKEPSRPKIALVLAGGGAKGAAHI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCHHHH
GVLKALEELNIPIDIITGTSMGAYVGGLYATGKSASEIEAYLHTVDWYSGYQDEVGREEK
HHHHHHHHCCCCEEEEECCCHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCHHH
NSRDKKYEDRFAINPSLGIRKEGVKSPKSAIQGQNMLKILRETSGNPVSVASFDDFPIRY
CCCCCCCCCCEEECCCCCCCHHCCCCCHHHHCHHHHHHHHHHCCCCEEEEECCCCCCCHH
RSVATDIVSMEEVVIDHGLLVDAMMASMSVPGALPPYEFEDKLLIDGGVTNNMPVELAKE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH
MGADIVIAVDISSNYMTKEQIGSLFDVASQLTNFMVKRSTQEQAEFLTDKDILLQPRVGD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCC
IETTDFSSMPRAYQEGYDTVMTLKSRLQSLAVAPNEYAQYQNKIKQQSANVRLAQGAIID
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCEEE
KVEVENRSHYESDKLERFIQFEQGTLLSSDYIEDKIHALYATNRFETITYLVEEDNNENV
EEECCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHEEECCCEEEEEEEEECCCCCCE
LKVTAKEKEWGPNYLNFRFFLEEDFDTHSQYGLGASINFTDLNDYGAELRTNVELGTDKI
EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECEEECCCEE
FDATIHYPFYLNHHFFVQSNMMYSDKKRSISTSSLEDKEPNSSMSFYPVNLRDFTVDALF
EEEEEECEEEECEEEEEECCCEECCHHCCCCCCCCCCCCCCCCCEEEEECCHHEEEEHEE
GVEATKDQQLKTGILYARGSHELTGLSAYGRTEYERLGATLEYNFDSLDSISLPTHGSLI
CCCCCCCCCHHEEEEEECCCCCEECEECCCCCHHHHCCCEEEECCCCCCCCCCCCCCCEE
NARYLYAFDKVNSRDVEGSDHSEQYIDEFTAEALFARSIARHTFISSAEYGITNSDDYLV
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
PVNPIELGGFNHLSGLPRNSLIGANKIYGRLTYRYRWFENDLGMFKTAVYLGASAEYGGL
ECCCEEECCCHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCHHHHHHHHEECCCCCCCCE
WSMKSTDISSAPLIFSGSLFGGIDTPIGPIILSYGRAENGLDSVYLIVGNVE
EEECCCCCCCCCEEEECCCCCCCCCCHHHHHEECCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIILIWMVIMRHVFRLNLWFVFLATFLFTPYLYAEPIKEPSRPKIALVLAGGGAKGAAHI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCHHHH
GVLKALEELNIPIDIITGTSMGAYVGGLYATGKSASEIEAYLHTVDWYSGYQDEVGREEK
HHHHHHHHCCCCEEEEECCCHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCHHHCCCHHH
NSRDKKYEDRFAINPSLGIRKEGVKSPKSAIQGQNMLKILRETSGNPVSVASFDDFPIRY
CCCCCCCCCCEEECCCCCCCHHCCCCCHHHHCHHHHHHHHHHCCCCEEEEECCCCCCCHH
RSVATDIVSMEEVVIDHGLLVDAMMASMSVPGALPPYEFEDKLLIDGGVTNNMPVELAKE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH
MGADIVIAVDISSNYMTKEQIGSLFDVASQLTNFMVKRSTQEQAEFLTDKDILLQPRVGD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCC
IETTDFSSMPRAYQEGYDTVMTLKSRLQSLAVAPNEYAQYQNKIKQQSANVRLAQGAIID
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCEEE
KVEVENRSHYESDKLERFIQFEQGTLLSSDYIEDKIHALYATNRFETITYLVEEDNNENV
EEECCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHEEECCCEEEEEEEEECCCCCCE
LKVTAKEKEWGPNYLNFRFFLEEDFDTHSQYGLGASINFTDLNDYGAELRTNVELGTDKI
EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECEEECCCEE
FDATIHYPFYLNHHFFVQSNMMYSDKKRSISTSSLEDKEPNSSMSFYPVNLRDFTVDALF
EEEEEECEEEECEEEEEECCCEECCHHCCCCCCCCCCCCCCCCCEEEEECCHHEEEEHEE
GVEATKDQQLKTGILYARGSHELTGLSAYGRTEYERLGATLEYNFDSLDSISLPTHGSLI
CCCCCCCCCHHEEEEEECCCCCEECEECCCCCHHHHCCCEEEECCCCCCCCCCCCCCCEE
NARYLYAFDKVNSRDVEGSDHSEQYIDEFTAEALFARSIARHTFISSAEYGITNSDDYLV
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
PVNPIELGGFNHLSGLPRNSLIGANKIYGRLTYRYRWFENDLGMFKTAVYLGASAEYGGL
ECCCEEECCCHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCHHHHHHHHEECCCCCCCCE
WSMKSTDISSAPLIFSGSLFGGIDTPIGPIILSYGRAENGLDSVYLIVGNVE
EEECCCCCCCCCEEEECCCCCCCCCCHHHHHEECCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]