| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713816
Identifier: 59713816
GI number: 59713816
Start: 711245
End: 711625
Strand: Reverse
Name: 59713816
Synonym: VF_A0633
Alternate gene names: NA
Gene position: 711625-711245 (Counterclockwise)
Preceding gene: 59713817
Following gene: 59713815
Centisome position: 53.49
GC content: 39.9
Gene sequence:
>381_bases ATGACAAGCTGTTCTATGGATTTAAATTCGTTTAAATATGATATTGATGAAAATCTTAAACTGTTAAATCTTCCAACGAC AGAGACTGTTGTTGGTGCAGGCGCTTTATCTTGGGTAATGATTGATCGAATTGATAAAGCGATAACATTAGCAAGTAACC CTAAACTTCCATTATCGGTAGTAGCTCGAGCTGGAGCCGCGGGTGCCGGTGTGTATGCTGCTTTTTGGGCTGGTGCAGTT ATTGGTAGTTCGGCAAGATCCTTTTACAGAAATACAAGTTGTTCACTTTCACAAGTTATCGACTTTGGTCGTGATAATGG TATTACTGGGTCATGGTTAGAAACAATTCTTTCACAGAATCCGGAGTTACTTCATGCCTGA
Upstream 100 bases:
>100_bases TGTATATCTTTAGCTATCGATCCATAAAATTGATATTGGAAGTATGGTTTAGTTGAGCTGCTGTTATAGTTTTGTCCAAT TAATTTATTGGAGGTGATTT
Downstream 100 bases:
>100_bases TCGATTATTATTAGTTGTGAGTTCAATTTTAGCTGTAATTTTGATTGTTTGTATCTCTTACTTCGTAGGTAGCGAAGCAG TGTTTATAATGATTGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTSCSMDLNSFKYDIDENLKLLNLPTTETVVGAGALSWVMIDRIDKAITLASNPKLPLSVVARAGAAGAGVYAAFWAGAV IGSSARSFYRNTSCSLSQVIDFGRDNGITGSWLETILSQNPELLHA
Sequences:
>Translated_126_residues MTSCSMDLNSFKYDIDENLKLLNLPTTETVVGAGALSWVMIDRIDKAITLASNPKLPLSVVARAGAAGAGVYAAFWAGAV IGSSARSFYRNTSCSLSQVIDFGRDNGITGSWLETILSQNPELLHA >Mature_125_residues TSCSMDLNSFKYDIDENLKLLNLPTTETVVGAGALSWVMIDRIDKAITLASNPKLPLSVVARAGAAGAGVYAAFWAGAVI GSSARSFYRNTSCSLSQVIDFGRDNGITGSWLETILSQNPELLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13398; Mature: 13267
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCSMDLNSFKYDIDENLKLLNLPTTETVVGAGALSWVMIDRIDKAITLASNPKLPLSV CCCCCCCCCCEEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHEEECCCCCCCHHH VARAGAAGAGVYAAFWAGAVIGSSARSFYRNTSCSLSQVIDFGRDNGITGSWLETILSQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCC PELLHA CCCCCC >Mature Secondary Structure TSCSMDLNSFKYDIDENLKLLNLPTTETVVGAGALSWVMIDRIDKAITLASNPKLPLSV CCCCCCCCCEEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHEEECCCCCCCHHH VARAGAAGAGVYAAFWAGAVIGSSARSFYRNTSCSLSQVIDFGRDNGITGSWLETILSQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCC PELLHA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA