| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713697
Identifier: 59713697
GI number: 59713697
Start: 589544
End: 590497
Strand: Reverse
Name: 59713697
Synonym: VF_A0514
Alternate gene names: NA
Gene position: 590497-589544 (Counterclockwise)
Preceding gene: 59713699
Following gene: 59713694
Centisome position: 44.39
GC content: 24.0
Gene sequence:
>954_bases ATGCCTACATTTGATCAAAATATAATATCTTTACATGAATTAGAAAATCATTTAAGACAACTAAGTCATATTAAATTAAT TCATATTATTAAACGCTGCAGAGTAGAAAGAATTTTATACGTAGATGACAATATCGTTTACGATTCAAAAGAAGAATCTA TTAAATTGCTAGCTATTGAATTTTATAAAAAAGGTTATAACTTAGGTAAACTAAAAGAAAAGATAGAACAATTATGTCAT TACTATATCAATGATACATACTTTGACTTTATTGATAATAAAGACCCAATTAGTATTTTATTTTGTTACTGCCATTTACT TAATAACAAGGTATTTTCAAAAAATGGAAATGATTTATTTTTTAATACGAGACGAACATTAAAAGATGAACCTCTAGAAT TCATTAGGCATACTACCATCCAAAGAAAAAACACTATTACACAAATGAGAATAGATTTTATCTCATTTATAAATCTAATC ACGTCAGATGATTGTAATAAGAAAAAATATATAAAGCACTTAAATAAAGAATATATCTTTTCAAGAAGTAAATTTAATTT TAATTGGCTTTCAAAAAAAGATAACGACCAGGCTATCTGGGCCGTAAAGTACATTAAAGATAACCATATAATAAAAAACA ATCATAAACACATACCAAATATTATTGATGATTATAACCATTATTCTATAGTCATTCCCGCACTATTCCATTCTTTAGAG ATAACTGATGATGCTAAAGAACTTTTCTTAATAAAAATGAAAAAAGCTTGGGGACAAGTTAAATACAGAAATAAAATAAA AAAAGACAAGAAAACAACTATTAATTTAGTTATTAGAAAAGATTCAAAAAGTAAACTTGAGGATATTTCTCATTTTTATG GGTTGAATTTAAATGAAACATTTGAAAAACTGATTAATAATGAGTCTAAAATAATAAAAAACTCAGGAATATAA
Upstream 100 bases:
>100_bases TCCATACGCTACATATCATGAAAAACGATTTATTTACTATACAAAACACATAAAAAAACCACAATAAACACACGCAAAAA CTACTTAGTAGATTACTAGA
Downstream 100 bases:
>100_bases TAATAAAGTAGGTAGAATTAACTCTACCTACTTTCTTTAAGCTATATTAAGCTACAAGCCTTAAGATTCTTTTTCCCACT CATAGACAAGCTACCAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MPTFDQNIISLHELENHLRQLSHIKLIHIIKRCRVERILYVDDNIVYDSKEESIKLLAIEFYKKGYNLGKLKEKIEQLCH YYINDTYFDFIDNKDPISILFCYCHLLNNKVFSKNGNDLFFNTRRTLKDEPLEFIRHTTIQRKNTITQMRIDFISFINLI TSDDCNKKKYIKHLNKEYIFSRSKFNFNWLSKKDNDQAIWAVKYIKDNHIIKNNHKHIPNIIDDYNHYSIVIPALFHSLE ITDDAKELFLIKMKKAWGQVKYRNKIKKDKKTTINLVIRKDSKSKLEDISHFYGLNLNETFEKLINNESKIIKNSGI
Sequences:
>Translated_317_residues MPTFDQNIISLHELENHLRQLSHIKLIHIIKRCRVERILYVDDNIVYDSKEESIKLLAIEFYKKGYNLGKLKEKIEQLCH YYINDTYFDFIDNKDPISILFCYCHLLNNKVFSKNGNDLFFNTRRTLKDEPLEFIRHTTIQRKNTITQMRIDFISFINLI TSDDCNKKKYIKHLNKEYIFSRSKFNFNWLSKKDNDQAIWAVKYIKDNHIIKNNHKHIPNIIDDYNHYSIVIPALFHSLE ITDDAKELFLIKMKKAWGQVKYRNKIKKDKKTTINLVIRKDSKSKLEDISHFYGLNLNETFEKLINNESKIIKNSGI >Mature_316_residues PTFDQNIISLHELENHLRQLSHIKLIHIIKRCRVERILYVDDNIVYDSKEESIKLLAIEFYKKGYNLGKLKEKIEQLCHY YINDTYFDFIDNKDPISILFCYCHLLNNKVFSKNGNDLFFNTRRTLKDEPLEFIRHTTIQRKNTITQMRIDFISFINLIT SDDCNKKKYIKHLNKEYIFSRSKFNFNWLSKKDNDQAIWAVKYIKDNHIIKNNHKHIPNIIDDYNHYSIVIPALFHSLEI TDDAKELFLIKMKKAWGQVKYRNKIKKDKKTTINLVIRKDSKSKLEDISHFYGLNLNETFEKLINNESKIIKNSGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37999; Mature: 37868
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFDQNIISLHELENHLRQLSHIKLIHIIKRCRVERILYVDDNIVYDSKEESIKLLAIE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCEEEEEEE FYKKGYNLGKLKEKIEQLCHYYINDTYFDFIDNKDPISILFCYCHLLNNKVFSKNGNDLF HHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEECCCCCEEE FNTRRTLKDEPLEFIRHTTIQRKNTITQMRIDFISFINLITSDDCNKKKYIKHLNKEYIF EECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHE SRSKFNFNWLSKKDNDQAIWAVKYIKDNHIIKNNHKHIPNIIDDYNHYSIVIPALFHSLE ECCCCCEEECCCCCCCCEEEEEEEECCCCEECCCCCCCCHHHCCCCCCEEEHHHHHHHCC ITDDAKELFLIKMKKAWGQVKYRNKIKKDKKTTINLVIRKDSKSKLEDISHFYGLNLNET CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHH FEKLINNESKIIKNSGI HHHHHCCCHHHHCCCCC >Mature Secondary Structure PTFDQNIISLHELENHLRQLSHIKLIHIIKRCRVERILYVDDNIVYDSKEESIKLLAIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCEEEEEEE FYKKGYNLGKLKEKIEQLCHYYINDTYFDFIDNKDPISILFCYCHLLNNKVFSKNGNDLF HHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEECCCCCEEE FNTRRTLKDEPLEFIRHTTIQRKNTITQMRIDFISFINLITSDDCNKKKYIKHLNKEYIF EECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHE SRSKFNFNWLSKKDNDQAIWAVKYIKDNHIIKNNHKHIPNIIDDYNHYSIVIPALFHSLE ECCCCCEEECCCCCCCCEEEEEEEECCCCEECCCCCCCCHHHCCCCCCEEEHHHHHHHCC ITDDAKELFLIKMKKAWGQVKYRNKIKKDKKTTINLVIRKDSKSKLEDISHFYGLNLNET CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHH FEKLINNESKIIKNSGI HHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA