| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is pykA [H]
Identifier: 59713677
GI number: 59713677
Start: 568497
End: 569942
Strand: Reverse
Name: pykA [H]
Synonym: VF_A0494
Alternate gene names: 59713677
Gene position: 569942-568497 (Counterclockwise)
Preceding gene: 59713678
Following gene: 59713675
Centisome position: 42.84
GC content: 43.85
Gene sequence:
>1446_bases ATGTCTAACAGACTACGTAGAACAAAAATCGTTACCACTCTTGGCCCTGCAACAGATCGTGATAATAACCTAGAAAAAAT CATTGCCGCTGGTGCAAACGTTGTTCGTATGAACTTCTCTCACGGTAGCCCAGAAGATCACATTGAGCGTACACGCAAAG TTCGTGAAATCGCAGCAAAACTTGGTACTCACGTTGCTATTCTAGGTGACTTACAAGGTCCTAAAATCCGTGTTTCTACG TTTAAAGAAGGTAAAATCCAATTAGCTATTGGTGATAAATTCACGCTAGATAGCGATTTACCTAAAGGTGAAGGTAATCA AGACTCTGTTGGCCTTGATTACAAAGAACTGCCTCAAGATGTAACTACTGGCGACGTTCTTCTTCTTGATGACGGCCGTG TACAACTTCGTGTAACTGCTGTTGAAGGCAACAAAGTACACACAGAAGTAACAGTTGCTGGTCCTCTATCAAACAATAAA GGCATCAACAAACAAGGTGGTGGCCTTTCTGCTGACGCACTAACTGAAAAAGACAAAGCTGACATCATTACAGCTGCTGC AATGAAAGTTGATTACCTAGCGGTTTCTTTCCCACGTAACGGCGAAGACATGAACTACGCTCGTCGTCTAGCTCGTGATG CAGGTCTTGAAGCGCAATTAGTTGCTAAAGTTGAACGTGCTGAAACGGTAGCGTCTGAAGAAGCACTGGATGACATCATC CTTGCATCTGATGTTGTTATGGTTGCACGTGGTGACCTAGGTGTTGAAATTGGCGATCCAGAGCTAGTTGGTGTTCAAAA GCAACTAATCCGTCGTGCTCGTAGTCTTAACCGTACGGTTATTACTGCAACACAAATGATGGAATCAATGATTTCTAGCC CAATGCCTACTCGTGCTGAAGTAATGGACGTTGCTAACGCCGTTCTTGATGGTACAGATGCGGTAATGCTTTCTGCTGAA ACAGCGGCTGGTGACTTCCCTGTTGAAACAGTAACTTCAATGGCTGGCGTTTGTATGGGTGCTGAAAAAGTACCTACAGT TAACGTATCTAACCACCGTTTAGACCGTCGCTTCACGACACCAGAAGAAACAATTGCAATGTCTACTATGTATGCAGCAA ACCACATGGAAGGCATCACAGCGATGATCACACTTACAGAGTCTGGTCGTACTCCACTTATGATGTCTCGTCTAAGTTCT GGTCTACCTATCTTTGCTCTATCTCGCAACGAAGGTACGCTAAACCGTGCAGCGCTTTACCGTGGTGTGACTCCAGTATT CTTTGATGAGAAAGCCGATTCAGGTCTTCCATCAACTTATGCTGCAATCAACACGCTAAAATCTAAAGGTTTACTATCAA CTGGCGACCAAGTAATCATCACTCAAGGTGACGTTATGGACATCGTTGGTTCAACAAACTGTATGCGTATTATTACTGTT GAGTAA
Upstream 100 bases:
>100_bases AATTTTTTACATTTACCCTGTTTGAGTCATGGTATTGTCACTATTGCCGATATATGTTTAAGCATAGGAAAAATAAAACA ACATCCACTTTGGAGATTAT
Downstream 100 bases:
>100_bases TTAAACATCGCATAAAATAAAAGCCCCGCTGTTAAATCAACATCGGGGCTTTTTTATTTCATCCAAATAACGATATTTGG CTATGATTTCCAACCATCAT
Product: pyruvate kinase II
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSNRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGSPEDHIERTRKVREIAAKLGTHVAILGDLQGPKIRVST FKEGKIQLAIGDKFTLDSDLPKGEGNQDSVGLDYKELPQDVTTGDVLLLDDGRVQLRVTAVEGNKVHTEVTVAGPLSNNK GINKQGGGLSADALTEKDKADIITAAAMKVDYLAVSFPRNGEDMNYARRLARDAGLEAQLVAKVERAETVASEEALDDII LASDVVMVARGDLGVEIGDPELVGVQKQLIRRARSLNRTVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGDFPVETVTSMAGVCMGAEKVPTVNVSNHRLDRRFTTPEETIAMSTMYAANHMEGITAMITLTESGRTPLMMSRLSS GLPIFALSRNEGTLNRAALYRGVTPVFFDEKADSGLPSTYAAINTLKSKGLLSTGDQVIITQGDVMDIVGSTNCMRIITV E
Sequences:
>Translated_481_residues MSNRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGSPEDHIERTRKVREIAAKLGTHVAILGDLQGPKIRVST FKEGKIQLAIGDKFTLDSDLPKGEGNQDSVGLDYKELPQDVTTGDVLLLDDGRVQLRVTAVEGNKVHTEVTVAGPLSNNK GINKQGGGLSADALTEKDKADIITAAAMKVDYLAVSFPRNGEDMNYARRLARDAGLEAQLVAKVERAETVASEEALDDII LASDVVMVARGDLGVEIGDPELVGVQKQLIRRARSLNRTVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGDFPVETVTSMAGVCMGAEKVPTVNVSNHRLDRRFTTPEETIAMSTMYAANHMEGITAMITLTESGRTPLMMSRLSS GLPIFALSRNEGTLNRAALYRGVTPVFFDEKADSGLPSTYAAINTLKSKGLLSTGDQVIITQGDVMDIVGSTNCMRIITV E >Mature_480_residues SNRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGSPEDHIERTRKVREIAAKLGTHVAILGDLQGPKIRVSTF KEGKIQLAIGDKFTLDSDLPKGEGNQDSVGLDYKELPQDVTTGDVLLLDDGRVQLRVTAVEGNKVHTEVTVAGPLSNNKG INKQGGGLSADALTEKDKADIITAAAMKVDYLAVSFPRNGEDMNYARRLARDAGLEAQLVAKVERAETVASEEALDDIIL ASDVVMVARGDLGVEIGDPELVGVQKQLIRRARSLNRTVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAET AAGDFPVETVTSMAGVCMGAEKVPTVNVSNHRLDRRFTTPEETIAMSTMYAANHMEGITAMITLTESGRTPLMMSRLSSG LPIFALSRNEGTLNRAALYRGVTPVFFDEKADSGLPSTYAAINTLKSKGLLSTGDQVIITQGDVMDIVGSTNCMRIITVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=499, Percent_Identity=35.4709418837675, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI33286420, Length=499, Percent_Identity=35.4709418837675, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=35.1515151515151, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI10835121, Length=493, Percent_Identity=34.2799188640974, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=34.2799188640974, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=33.448275862069, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=33.448275862069, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=31.3559322033898, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=31.3559322033898, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=30.6976744186047, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=77.1309771309771, Blast_Score=748, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=475, Percent_Identity=37.4736842105263, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=35.4508196721311, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI71984413, Length=494, Percent_Identity=35.4251012145749, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17506831, Length=494, Percent_Identity=35.4251012145749, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71984406, Length=494, Percent_Identity=35.4251012145749, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17506829, Length=494, Percent_Identity=35.4251012145749, Blast_Score=242, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6319279, Length=491, Percent_Identity=35.030549898167, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6324923, Length=492, Percent_Identity=32.7235772357724, Blast_Score=224, Evalue=2e-59, Organism=Drosophila melanogaster, GI24648964, Length=497, Percent_Identity=36.0160965794769, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI28571814, Length=497, Percent_Identity=36.0160965794769, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24648966, Length=421, Percent_Identity=35.8669833729216, Blast_Score=241, Evalue=9e-64, Organism=Drosophila melanogaster, GI24581235, Length=499, Percent_Identity=30.4609218436874, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24646914, Length=274, Percent_Identity=34.3065693430657, Blast_Score=145, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51631; Mature: 51499
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGSPEDHIERTRKVREIAAK CCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGTHVAILGDLQGPKIRVSTFKEGKIQLAIGDKFTLDSDLPKGEGNQDSVGLDYKELPQD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCCCCCCHHHCCCC VTTGDVLLLDDGRVQLRVTAVEGNKVHTEVTVAGPLSNNKGINKQGGGLSADALTEKDKA CCCCCEEEEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHH DIITAAAMKVDYLAVSFPRNGEDMNYARRLARDAGLEAQLVAKVERAETVASEEALDDII HEEEHHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGVQKQLIRRARSLNRTVITATQMMESMISSPMPTRAE HHCCEEEEEECCCCEEECCCCEECHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGDFPVETVTSMAGVCMGAEKVPTVNVSNHRLDRRFTT HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCC PEETIAMSTMYAANHMEGITAMITLTESGRTPLMMSRLSSGLPIFALSRNEGTLNRAALY CHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH RGVTPVFFDEKADSGLPSTYAAINTLKSKGLLSTGDQVIITQGDVMDIVGSTNCMRIITV HCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCCEEEEEEE E C >Mature Secondary Structure SNRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGSPEDHIERTRKVREIAAK CCCCCEEEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGTHVAILGDLQGPKIRVSTFKEGKIQLAIGDKFTLDSDLPKGEGNQDSVGLDYKELPQD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCCCCCCHHHCCCC VTTGDVLLLDDGRVQLRVTAVEGNKVHTEVTVAGPLSNNKGINKQGGGLSADALTEKDKA CCCCCEEEEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHH DIITAAAMKVDYLAVSFPRNGEDMNYARRLARDAGLEAQLVAKVERAETVASEEALDDII HEEEHHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGVQKQLIRRARSLNRTVITATQMMESMISSPMPTRAE HHCCEEEEEECCCCEEECCCCEECHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGDFPVETVTSMAGVCMGAEKVPTVNVSNHRLDRRFTT HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCC PEETIAMSTMYAANHMEGITAMITLTESGRTPLMMSRLSSGLPIFALSRNEGTLNRAALY CHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH RGVTPVFFDEKADSGLPSTYAAINTLKSKGLLSTGDQVIITQGDVMDIVGSTNCMRIITV HCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCCEEEEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]