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The map label for this gene is 59713589

Identifier: 59713589

GI number: 59713589

Start: 461356

End: 462006

Strand: Reverse

Name: 59713589

Synonym: VF_A0406

Alternate gene names: NA

Gene position: 462006-461356 (Counterclockwise)

Preceding gene: 59713590

Following gene: 59713588

Centisome position: 34.73

GC content: 35.94

Gene sequence:

>651_bases
GTGAAAATTTGGGATAGTTTTGTCCGAATTTACCACTGGAGCCAAGTCGTTGTACTTGGCTCTTTATGGTATACCGCTGA
AGAAGGGCTAATGGAGTTACATTTCACTCTAGCTTATCTTTTAATGGCCCTACTCTTAACAAGAATCCTTTGGGGCTTTA
TTGGAAGTGATACGGCTCGATTCTCTCACTTTCTAGGCTCTCCACAATCTGTTATTAACTATCTGAAAACCTCGCATACT
AATGGCTTACACCATTCAAAAGGACATAATCCAGCGGGTGGTTACATGGTATTGGCATTATTGCTTCTATTATTAGTGCA
ATTAGTGACAGGGTTATTTAGTAATGATGATATTCTTTCTGAAGGTCCATTAGCTTATCTTGTTAGTTATGATAAAAGTG
GCTTTCTTACTAGGATCCATCACCTAAATTTTGATTTAATATTAGGTTTTACTGCTGTTCATGTAATTGCGGTTATCTTA
TATCGATTAAAAGGCGTTAATTTAATACTTCCTATGTTTACAGGGAAAGTAGATTTAGATGAAACAGAACCAAAAATGAA
GCATCCATTTAAGGCTTGGATCATTTTTGCTGTCATATCTGTGTTTATCTACTTTATTTGGGCAGATGAAGTGATAAGCT
ACCTCTTTTAG

Upstream 100 bases:

>100_bases
AGGTGATAAAGCGGCGATTCGTAAAGCTTTTGGGAAAACAGTGAAAAACTGTAAAGCTTGCCACTCTGATTACAAAGCAC
GTTAATCTGGAGACTAACAC

Downstream 100 bases:

>100_bases
AATAAAAGAGAACTTTCAATGACACGTTTCCTTGATTGGTGGAATACGCTTTTAGAGTTTAAAGATCACGATTGGGCACA
AAATATTATCGTGATCACTC

Product: hydrogenase cytochrome b-type

Products: NA

Alternate protein names: Cytochrome; B-Type Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Integral Membrane Protein; Nickel-Dependent Hydrogenase; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKIWDSFVRIYHWSQVVVLGSLWYTAEEGLMELHFTLAYLLMALLLTRILWGFIGSDTARFSHFLGSPQSVINYLKTSHT
NGLHHSKGHNPAGGYMVLALLLLLLVQLVTGLFSNDDILSEGPLAYLVSYDKSGFLTRIHHLNFDLILGFTAVHVIAVIL
YRLKGVNLILPMFTGKVDLDETEPKMKHPFKAWIIFAVISVFIYFIWADEVISYLF

Sequences:

>Translated_216_residues
MKIWDSFVRIYHWSQVVVLGSLWYTAEEGLMELHFTLAYLLMALLLTRILWGFIGSDTARFSHFLGSPQSVINYLKTSHT
NGLHHSKGHNPAGGYMVLALLLLLLVQLVTGLFSNDDILSEGPLAYLVSYDKSGFLTRIHHLNFDLILGFTAVHVIAVIL
YRLKGVNLILPMFTGKVDLDETEPKMKHPFKAWIIFAVISVFIYFIWADEVISYLF
>Mature_216_residues
MKIWDSFVRIYHWSQVVVLGSLWYTAEEGLMELHFTLAYLLMALLLTRILWGFIGSDTARFSHFLGSPQSVINYLKTSHT
NGLHHSKGHNPAGGYMVLALLLLLLVQLVTGLFSNDDILSEGPLAYLVSYDKSGFLTRIHHLNFDLILGFTAVHVIAVIL
YRLKGVNLILPMFTGKVDLDETEPKMKHPFKAWIIFAVISVFIYFIWADEVISYLF

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24606; Mature: 24606

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIWDSFVRIYHWSQVVVLGSLWYTAEEGLMELHFTLAYLLMALLLTRILWGFIGSDTAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FSHFLGSPQSVINYLKTSHTNGLHHSKGHNPAGGYMVLALLLLLLVQLVTGLFSNDDILS
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
EGPLAYLVSYDKSGFLTRIHHLNFDLILGFTAVHVIAVILYRLKGVNLILPMFTGKVDLD
CCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCC
ETEPKMKHPFKAWIIFAVISVFIYFIWADEVISYLF
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKIWDSFVRIYHWSQVVVLGSLWYTAEEGLMELHFTLAYLLMALLLTRILWGFIGSDTAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FSHFLGSPQSVINYLKTSHTNGLHHSKGHNPAGGYMVLALLLLLLVQLVTGLFSNDDILS
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
EGPLAYLVSYDKSGFLTRIHHLNFDLILGFTAVHVIAVILYRLKGVNLILPMFTGKVDLD
CCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCC
ETEPKMKHPFKAWIIFAVISVFIYFIWADEVISYLF
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA