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The map label for this gene is 59713457

Identifier: 59713457

GI number: 59713457

Start: 304321

End: 305448

Strand: Reverse

Name: 59713457

Synonym: VF_A0274

Alternate gene names: NA

Gene position: 305448-304321 (Counterclockwise)

Preceding gene: 59713459

Following gene: 59713455

Centisome position: 22.96

GC content: 35.55

Gene sequence:

>1128_bases
ATGAATCAAGGAACCAAACCATCAATTATTTGGCTAAATGTATTTATTTTTACATCTAGCTTCCTACTCGCATTTGTTGC
GACCCCTATTTATGCTTATTACAATCCACTAGGCAGTGAACATTGGATCTGGTTACTTTTAACTTTTAGCTTCTGTAACC
TATCCATAACTGCTGGTTATCACCGTTTATGGTCGCACAAAGCATATAACGCCCATCCAGCATTACGTTTCATTTTCGCT
CTAGGTGGGGCTTTTGCATTACAAAATAGCGCACTTCATTGGTCATCTGATCATCGTATTCATCATCGTCATGTTGATGA
TAATGACAAAGACCCCTACTCAGCTAAGCGTGGTTTTTGGTTCTCTCATATTGGTTGGATGCTACGTCATTATAAACCAG
CTACCTATAACGATTATGGCAACTGTCGAGATTTACAAAAAGACAATATCCTCATGTGGCAACACAAACACTATATTGTC
TTAGCGCTTATAATGAATATTGGCGTACCTCTATTATTAGGCGTTATCTATGGCGATATCATAGGCATGCTATTAATGGT
AGGAGCTGTTCGTCTAACATTAAGTCATCACACAACGTTCTTTATTAACTCATTAGCTCACATCTGGGGATCTCAACCTT
ATACAGAAAAAAATACAGCTCGAGATAACGGATTTTTAGCTATTTTCACTTTTGGTGAAGGCTATCATAATTACCACCAC
ATTTTTGAAAATGACTACCGAAATGGAATTTACTGGTGGCAATATGATCCAACAAAATGGTTTATTAAAACCTGCTCATT
GCTAGGCCTAGCTCATAAACTTCGTGTTAGTCCACAAGCAAAAATAGAAAAAGCCAAAGCGCTCATGTTACGTAAAAAAG
CAGAAAGTAAAATTGCTACATTACATAATTACCATGCAATTAAAGAACATTTAGAAGCTGAGTATGACGCATTAATTGAA
AGGATGGCTGAATACTACGATTCAAAAAAACAGTTAATCGAGAATAAAAAAGACACGTTATCGAAAAAATATGAATTAGC
ACTTTTAAATGTCCAACATAAACAAATAAAAATGCAATTTGAACATCAAAAGAGAGTTTGGAATCGTCTTGTTCTTCAAT
ACGTATAA

Upstream 100 bases:

>100_bases
ATATCGCATTTGTTACATATTCTTAAATGTCTGTTCTTGACTATAATTTAATCTCAAACTATTCTAGCGCACAACTGTAC
GCTTAAATGGATATTACAAA

Downstream 100 bases:

>100_bases
GCATTCTTAATACTAAAAAGGCATAGTCGAATACTATGCCTTTTCTATTTATTCCAACATTAAAAGCTCGTTTTTCTTCG
TCGGTACAAACCAAATGCAA

Product: acyl-CoA desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNQGTKPSIIWLNVFIFTSSFLLAFVATPIYAYYNPLGSEHWIWLLLTFSFCNLSITAGYHRLWSHKAYNAHPALRFIFA
LGGAFALQNSALHWSSDHRIHHRHVDDNDKDPYSAKRGFWFSHIGWMLRHYKPATYNDYGNCRDLQKDNILMWQHKHYIV
LALIMNIGVPLLLGVIYGDIIGMLLMVGAVRLTLSHHTTFFINSLAHIWGSQPYTEKNTARDNGFLAIFTFGEGYHNYHH
IFENDYRNGIYWWQYDPTKWFIKTCSLLGLAHKLRVSPQAKIEKAKALMLRKKAESKIATLHNYHAIKEHLEAEYDALIE
RMAEYYDSKKQLIENKKDTLSKKYELALLNVQHKQIKMQFEHQKRVWNRLVLQYV

Sequences:

>Translated_375_residues
MNQGTKPSIIWLNVFIFTSSFLLAFVATPIYAYYNPLGSEHWIWLLLTFSFCNLSITAGYHRLWSHKAYNAHPALRFIFA
LGGAFALQNSALHWSSDHRIHHRHVDDNDKDPYSAKRGFWFSHIGWMLRHYKPATYNDYGNCRDLQKDNILMWQHKHYIV
LALIMNIGVPLLLGVIYGDIIGMLLMVGAVRLTLSHHTTFFINSLAHIWGSQPYTEKNTARDNGFLAIFTFGEGYHNYHH
IFENDYRNGIYWWQYDPTKWFIKTCSLLGLAHKLRVSPQAKIEKAKALMLRKKAESKIATLHNYHAIKEHLEAEYDALIE
RMAEYYDSKKQLIENKKDTLSKKYELALLNVQHKQIKMQFEHQKRVWNRLVLQYV
>Mature_375_residues
MNQGTKPSIIWLNVFIFTSSFLLAFVATPIYAYYNPLGSEHWIWLLLTFSFCNLSITAGYHRLWSHKAYNAHPALRFIFA
LGGAFALQNSALHWSSDHRIHHRHVDDNDKDPYSAKRGFWFSHIGWMLRHYKPATYNDYGNCRDLQKDNILMWQHKHYIV
LALIMNIGVPLLLGVIYGDIIGMLLMVGAVRLTLSHHTTFFINSLAHIWGSQPYTEKNTARDNGFLAIFTFGEGYHNYHH
IFENDYRNGIYWWQYDPTKWFIKTCSLLGLAHKLRVSPQAKIEKAKALMLRKKAESKIATLHNYHAIKEHLEAEYDALIE
RMAEYYDSKKQLIENKKDTLSKKYELALLNVQHKQIKMQFEHQKRVWNRLVLQYV

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=289, Percent_Identity=34.2560553633218, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI53759151, Length=294, Percent_Identity=31.2925170068027, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI148596938, Length=125, Percent_Identity=39.2, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17561776, Length=289, Percent_Identity=33.5640138408304, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17540878, Length=239, Percent_Identity=35.9832635983264, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17561774, Length=287, Percent_Identity=32.0557491289199, Blast_Score=157, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6321383, Length=251, Percent_Identity=45.4183266932271, Blast_Score=226, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24646500, Length=309, Percent_Identity=33.3333333333333, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI21358573, Length=285, Percent_Identity=34.3859649122807, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24662393, Length=284, Percent_Identity=32.3943661971831, Blast_Score=155, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24646303, Length=284, Percent_Identity=33.0985915492958, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646299, Length=284, Percent_Identity=33.0985915492958, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646305, Length=284, Percent_Identity=33.0985915492958, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646301, Length=284, Percent_Identity=33.0985915492958, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646297, Length=284, Percent_Identity=33.0985915492958, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646295, Length=239, Percent_Identity=35.1464435146443, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI21358571, Length=209, Percent_Identity=33.9712918660287, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24651333, Length=308, Percent_Identity=25.6493506493506, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161079187, Length=308, Percent_Identity=25.6493506493506, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44105; Mature: 44105

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGTKPSIIWLNVFIFTSSFLLAFVATPIYAYYNPLGSEHWIWLLLTFSFCNLSITAGY
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHCEEEEHHH
HRLWSHKAYNAHPALRFIFALGGAFALQNSALHWSSDHRIHHRHVDDNDKDPYSAKRGFW
HHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCEECCCCCCEEECCCCCCCCCCCCHHCCCH
FSHIGWMLRHYKPATYNDYGNCRDLQKDNILMWQHKHYIVLALIMNIGVPLLLGVIYGDI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH
IGMLLMVGAVRLTLSHHTTFFINSLAHIWGSQPYTEKNTARDNGFLAIFTFGEGYHNYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
IFENDYRNGIYWWQYDPTKWFIKTCSLLGLAHKLRVSPQAKIEKAKALMLRKKAESKIAT
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LHNYHAIKEHLEAEYDALIERMAEYYDSKKQLIENKKDTLSKKYELALLNVQHKQIKMQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECHHHHHHHHH
EHQKRVWNRLVLQYV
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQGTKPSIIWLNVFIFTSSFLLAFVATPIYAYYNPLGSEHWIWLLLTFSFCNLSITAGY
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHCEEEEHHH
HRLWSHKAYNAHPALRFIFALGGAFALQNSALHWSSDHRIHHRHVDDNDKDPYSAKRGFW
HHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCEECCCCCCEEECCCCCCCCCCCCHHCCCH
FSHIGWMLRHYKPATYNDYGNCRDLQKDNILMWQHKHYIVLALIMNIGVPLLLGVIYGDI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH
IGMLLMVGAVRLTLSHHTTFFINSLAHIWGSQPYTEKNTARDNGFLAIFTFGEGYHNYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
IFENDYRNGIYWWQYDPTKWFIKTCSLLGLAHKLRVSPQAKIEKAKALMLRKKAESKIAT
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LHNYHAIKEHLEAEYDALIERMAEYYDSKKQLIENKKDTLSKKYELALLNVQHKQIKMQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECHHHHHHHHH
EHQKRVWNRLVLQYV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA