BacMap

Definition	Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession	NC_006841
Length	1,330,333

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The map label for this gene is dbpA [H]

Identifier: 59713337

GI number: 59713337

Start: 171540

End: 172928

Strand: Reverse

Name: dbpA [H]

Synonym: VF_A0154

Alternate gene names: 59713337

Gene position: 172928-171540 (Counterclockwise)

Preceding gene: 59713340

Following gene: 59713331

Centisome position: 13.0

GC content: 40.39

Gene sequence:

>1389_bases
TTGAGTCAAACATCTTTCTCATCATTAGATCTGCATCCGTCACTTTTACAAAACCTAGAAACGTTAGGTTATAACGAAAT
GACACCAATCCAAGCACAAAGCTTACCTTTCATGCTAAAAGGGAAAGATGTTATTGCCCAAGGGAAAACGGGCTCAGGTA
AAACGGCGGCATTTGGTTTAGGTTTATTAGCTAACTTAAATGTAAAACGCTTTCGTGTTCAATCTTTGGTTTTATGCCCA
ACACGTGAACTGGCAGATCAAGTAGCAAAAGAAATTCGTAAACTTGCTCGTGCAATTCATAACATTAAAGTACTAACTTT
ATGCGGCGGTGTTCCTTTTGGCCCACAAATAGGTTCATTAGAACACGGTGCTCACATTATCGTTGGTACTCCAGGTCGTG
TTGAAGAACACCTTCGTAAAGGTTACTTAAACTTAGATAACCTAAATACATTTGTTCTTGATGAAGCAGACCGTATGTTA
GAAATGGGCTTCCAAGATGCAATTGATGCGGTATTAGATCACGCACCAGTTAAACGTCAAAATCTTCTGTTTAGTGCGAC
TTTCCCACCGCAAATCAAGTCTATTGCAGATCGCATCATGAACGATCCAATCATGACTAAAGCAGAAGAAACAGTAGAAA
ACACATCAATTAACCAACACTTCTTTAAAGTGGGTGATTTTGAAGATCGTCTAGAAGCACTGCAAATCCTATTGCTTAAG
CACCAACCTGAATCAACGGTTATCTTCTGTAATACAAAACGTGTAACCCAAGAAGTGGCAGATGAACTTCGTCATTACGA
TTTCAGCGTAACTGCACTTCACGGTGATTTAGAACAACGTGATCGTGATAAAGCGTTAGTACGTTTTGCCAATAAGAGTA
CGTCGATTCTTGTTGCAACCGACGTTGCTGCACGTGGCTTAGATATCGAATCACTTGATGCTGTGGTTAACTTTGAATTA
TCTCGTGATCCTGAAGTGCACGTTCACCGTATTGGTCGTACAGGTCGCGCAGGAAATAAAGGTATTGCTCTAAGCCTCTT
CAATGAAAAAGAAATGCACAACATTGCTCAAATCGAAGAGTACATGAACATTGATATTCGTGATGAAGCGTTACCAAGTA
CTGATTACCTAAAAGAGCCTGCTTACTACGCTGAAATGGTTACTTTATGGATTGATGGTGGTAAGAAAAACAAACTACGT
CCGGGTGACATCTTAGGTGCACTAACAGGTAAAGACGGTATCGAAGGTAAAATGGTTGGTAAGATCAACGTATTTGATTT
CCATGCTTATGTTGCTGTTCATAATACCGTTGCAAAAGCAGCGCTTAAGAAACTAGAAAGTGGCAAAATGAAAGGCCGTA
GCTTCCGCGTAAGCCGTATGCGTGGCTAA

Upstream 100 bases:

>100_bases
GAAAAACTGTGATCTCCCTTGCTTTTTTAGCCTCTTATCTTTACTCTGCCATCCATTGGACAATTATCACTTTGTCACTA
CTTGTTTAAAGGAAATCACC

Downstream 100 bases:

>100_bases
ACCAAATTCATATCAAGTAATGACCATTTCATTATAAATAAAAAGGCCGAGTAGATATTACCTACTCGGCCTTTCTTTTA
TCAAATAGTTATGTGGATTG

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGLGLLANLNVKRFRVQSLVLCP
TRELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRML
EMGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLK
HQPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVATDVAARGLDIESLDAVVNFEL
SRDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLR
PGDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG

Sequences:

>Translated_462_residues
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGLGLLANLNVKRFRVQSLVLCP
TRELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRML
EMGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLK
HQPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVATDVAARGLDIESLDAVVNFEL
SRDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLR
PGDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG
>Mature_461_residues
SQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGLGLLANLNVKRFRVQSLVLCPT
RELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRMLE
MGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLKH
QPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVATDVAARGLDIESLDAVVNFELS
RDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLRP
GDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=376, Percent_Identity=34.3085106382979, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI169881239, Length=375, Percent_Identity=39.4666666666667, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI13514809, Length=375, Percent_Identity=39.4666666666667, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI301171475, Length=374, Percent_Identity=38.7700534759358, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI301171467, Length=374, Percent_Identity=38.7700534759358, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI87196351, Length=374, Percent_Identity=38.7700534759358, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=37.1830985915493, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=37.1830985915493, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=36.3867684478371, Blast_Score=232, Evalue=7e-61,
Organism=Homo sapiens, GI31542656, Length=383, Percent_Identity=34.2036553524804, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=37.5, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=37.5, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=37.5, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=37.5, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI164664518, Length=382, Percent_Identity=30.3664921465969, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI20149629, Length=408, Percent_Identity=35.0490196078431, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=36.1111111111111, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=34.4173441734417, Blast_Score=218, Evalue=6e-57,
Organism=Homo sapiens, GI13129006, Length=395, Percent_Identity=34.9367088607595, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI222352149, Length=391, Percent_Identity=34.0153452685422, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=35.8757062146893, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=35.5437665782493, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=33.7628865979381, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI83700235, Length=378, Percent_Identity=35.7142857142857, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI224593278, Length=381, Percent_Identity=34.6456692913386, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=32.3119777158774, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=33.9425587467363, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=33.9425587467363, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=30.188679245283, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=31.0541310541311, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=31.0541310541311, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=33.6111111111111, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=31.700288184438, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=30.1136363636364, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI41327779, Length=395, Percent_Identity=30.379746835443, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=32.3204419889503, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI164419743, Length=385, Percent_Identity=32.4675324675325, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI51094101, Length=385, Percent_Identity=32.4675324675325, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI13514831, Length=370, Percent_Identity=32.7027027027027, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=29.3103448275862, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI41327776, Length=404, Percent_Identity=30.1980198019802, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI62241022, Length=363, Percent_Identity=33.3333333333333, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=30.7304785894207, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=33.1378299120235, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI38569503, Length=400, Percent_Identity=30.5, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI38569505, Length=400, Percent_Identity=30.5, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=31.1572700296736, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=32.2289156626506, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI256773275, Length=427, Percent_Identity=26.463700234192, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI17505907, Length=215, Percent_Identity=34.4186046511628, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI154759257, Length=407, Percent_Identity=25.0614250614251, Blast_Score=97, Evalue=4e-20,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=55.3376906318083, Blast_Score=500, Evalue=1e-143,
Organism=Escherichia coli, GI87082221, Length=376, Percent_Identity=40.9574468085106, Blast_Score=281, Evalue=9e-77,
Organism=Escherichia coli, GI1787016, Length=390, Percent_Identity=40.5128205128205, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=36.968085106383, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1788930, Length=386, Percent_Identity=36.7875647668394, Blast_Score=203, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=35.6164383561644, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=35.6164383561644, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=35.656836461126, Blast_Score=248, Evalue=6e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=38.2513661202186, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=38.2513661202186, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=38.2513661202186, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI17552642, Length=364, Percent_Identity=37.6373626373626, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI71995718, Length=396, Percent_Identity=36.8686868686869, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=364, Percent_Identity=36.8131868131868, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=30.6233062330623, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=35.1274787535411, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=36.046511627907, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.2903225806452, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=36.2903225806452, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71999646, Length=350, Percent_Identity=34, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=33.6021505376344, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=34, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=376, Percent_Identity=35.1063829787234, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=33.419689119171, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=31.3672922252011, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=33.7874659400545, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=31.3672922252011, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=29.8913043478261, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=32.520325203252, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=32.0954907161804, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=29.0598290598291, Blast_Score=178, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=374, Percent_Identity=29.6791443850267, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=31.0077519379845, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=31.0077519379845, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17509811, Length=367, Percent_Identity=30.2452316076294, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17536103, Length=394, Percent_Identity=31.2182741116751, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=30.4461942257218, Blast_Score=155, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=394, Percent_Identity=28.9340101522843, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17507641, Length=381, Percent_Identity=28.0839895013123, Blast_Score=139, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17556951, Length=397, Percent_Identity=26.1964735516373, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=27.9569892473118, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=25.1833740831296, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=32.3383084577114, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=29.144385026738, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.969696969697, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71997889, Length=368, Percent_Identity=27.1739130434783, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=335, Percent_Identity=25.3731343283582, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=37.3831775700935, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17566630, Length=340, Percent_Identity=25, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=38.268156424581, Blast_Score=243, Evalue=7e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=37.3684210526316, Blast_Score=238, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6324778, Length=381, Percent_Identity=37.007874015748, Blast_Score=234, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6320224, Length=388, Percent_Identity=32.7319587628866, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=38.6111111111111, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320041, Length=381, Percent_Identity=32.2834645669291, Blast_Score=221, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=36.7292225201072, Blast_Score=219, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.9444444444444, Blast_Score=216, Evalue=6e-57,
Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=34.9462365591398, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=34.9462365591398, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6324620, Length=386, Percent_Identity=32.9015544041451, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=385, Percent_Identity=33.2467532467532, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=372, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=351, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=29.4270833333333, Blast_Score=189, Evalue=9e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=32.6086956521739, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=429, Percent_Identity=29.6037296037296, Blast_Score=172, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=28.5714285714286, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=27.6041666666667, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=29.3010752688172, Blast_Score=144, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=30, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6320173, Length=218, Percent_Identity=34.4036697247706, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=25.609756097561, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=359, Percent_Identity=24.2339832869081, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6322876, Length=181, Percent_Identity=32.0441988950276, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24645031, Length=376, Percent_Identity=35.1063829787234, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=39.4366197183099, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI17985987, Length=398, Percent_Identity=38.1909547738693, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=36.2116991643454, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=34.4827586206897, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=34.4827586206897, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=34.4827586206897, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=34.4827586206897, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=36.4611260053619, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=35.0974930362117, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=34.2857142857143, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=33.983286908078, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=36.9146005509642, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=34.6478873239437, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24583281, Length=382, Percent_Identity=30.1047120418848, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=30.1047120418848, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI28575014, Length=362, Percent_Identity=34.2541436464088, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=33.0555555555556, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=31.8302387267904, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=33.1564986737401, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI17977678, Length=395, Percent_Identity=31.1392405063291, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=32.3119777158774, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=32.3119777158774, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=34.7540983606557, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24581954, Length=371, Percent_Identity=28.8409703504043, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24581952, Length=371, Percent_Identity=28.8409703504043, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24581956, Length=371, Percent_Identity=28.8409703504043, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=31.7204301075269, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=30.7901907356948, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=29.9450549450549, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=27.8089887640449, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24668515, Length=324, Percent_Identity=32.7160493827161, Blast_Score=145, Evalue=7e-35,
Organism=Drosophila melanogaster, GI20130173, Length=463, Percent_Identity=27.8617710583153, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=27.8894472361809, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=34.0909090909091, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI18859659, Length=220, Percent_Identity=34.0909090909091, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI19920478, Length=383, Percent_Identity=27.9373368146214, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI17136666, Length=410, Percent_Identity=26.8292682926829, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=23.5127478753541, Blast_Score=96, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 51352; Mature: 51221

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGL
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCHHHHH
GLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSL
HHHHCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC
EHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRMLEMGFQDAIDAVLDHAPVKRQ
CCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECHHHHHHHCCHHHHHHHHHCCCCCCCC
NLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLK
CEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHEECCCHHHHHHHHHHHHHC
HQPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT
CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCCEEEEEE
DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEE
CHHHCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHH
YMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLRPGDILGALTGKDGIEGKMVG
HHCCCCCCCCCCCHHHHHCCHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEE
KINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG
EEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure 
SQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCHHHHH
GLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSL
HHHHCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC
EHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRMLEMGFQDAIDAVLDHAPVKRQ
CCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECHHHHHHHCCHHHHHHHHHCCCCCCCC
NLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLK
CEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHEECCCHHHHHHHHHHHHHC
HQPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT
CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCCEEEEEE
DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEE
CHHHCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHH
YMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLRPGDILGALTGKDGIEGKMVG
HHCCCCCCCCCCCHHHHHCCHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEE
KINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG
EEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]