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The map label for this gene is 59713318

Identifier: 59713318

GI number: 59713318

Start: 148687

End: 150549

Strand: Reverse

Name: 59713318

Synonym: VF_A0135

Alternate gene names: NA

Gene position: 150549-148687 (Counterclockwise)

Preceding gene: 59713320

Following gene: 59713317

Centisome position: 11.32

GC content: 34.08

Gene sequence:

>1863_bases
ATGGCTGAACTAATACCAACATTAAATACCTGTTTATCTAAAATGACGGCAGGAGAAAAACGTTTCGCGCAACGTGTTGA
AAACTTATTAGAGGATGATTACATATGTTGGTATGACATCCCTGTTGGACGCCAACGACGTTACCCTGATTTCATTATCT
TACATCCCGCACGTGGGTTACTATTTCTTGAAGTAAAAGATTGGAAACTTGATACTATCAGAAATATAGATGCGTCTCGT
GTCGAATTACTAACATCAAAAGGCATTGAAACAACAAGTAATCCTATTGAGCAAGTACGTCAATGTAGTTATCAAGTCAT
AGATAAACTAAAACGAGATAACTTACTTATAAATCAAGATGGGAAATATAAAGGTAACTTGTGTCTTCCTTATGGGTATG
GCGTTGTATTAACCAATATTACTCGCATTCAGTTAGATCGAGCTATTCCTTTAGACGCTCAAGACTCGGTACTTCCACAT
CACTTAGTCATTTGTAAAGATGAAATGGTAAGTACAATAGATCCTGAAAAGTTTCAAACAAAACTCTGGAATATGTTCAA
TTATAAATTTGGAAACCAATTATCATTACCACAAATTGATAGAATTCGATGGCATCTATTTCCAGAAATTCGTATTTCAA
CATCAGAACAACAAACTCTGCTACCTCTAGAAGATACGAACGAATTAATAAATCCAAATGATCACATTCCTGAAATAATT
AAAATCATGGATATTCAACAGGAGCAGTTAGCTAGAAGCTTAGGTGATGGACATCGAGTCATTCATGGCGTAGCTGGTTC
CGGAAAAACGTTGATCTTAGGTTATCGTTGCTTACATTTAGCCGAGCAATTAAAAAAACCAATTTTAGTACTCTGCTTTA
ATATCACATTAGCGGCAAGGCTCCGTAGCTTTATCAATGATAAAGGTATTGCAGGACAAGTTCAGGTCTATCATTTTCAT
GATTGGTGTGGGCAACAAATTAAAACTTACAATTTAGATATTCAAAAGGGCGAAGCCCCTTATTGGGAAAGACAAGTTGA
AACTGTCATAGAGGGTGTTGAAAAAGGAAATATACCAAAAGGGCAGTATGGAGCACTATTGATTGATGAAGGACATGATT
TTGAAGCAGAATGGCTAACATTAATTACTCAAATGATTGATCCTGAAACAAATTCGTTATTATTACTATATGACGATGCT
CAATCTATCTACAAGAAAAAAAGCAATTTAGACTTTAGTTTAGCAAGTGTTGGAATTCAAGCCCAAGGAAGAACTACAGT
ATTACGTTTAAACTATCGTAATACCAGAGAAATACTATCTTTTTCTTATCAGTTTGCTAAACAATATTTTGATAATTCGG
ATACTAAAGAAATCCCATTAATTCATCCTGAATCTGCTGGTATTACAGGCTCTCATCCTGTTGTTAAAAAATTCTCAACG
ATGGATCAAGAAGTTGAATATGCAGTTAAATGTTTAGTTCATTGGAAACAAAATGGATATGCATGGAGCGATATCGCCAT
AATTTATCCTTGTAAACATATTGGCAAAAAAGTTGCTGAAGCACTAAAAACTAGAAGTATACCTCATATATTACTCGCTA
CTTCTGAGCATAAAAAACAATATAATCCAATCAATGATGTCGTTAACGTTCTTCCCATTCCTAGCAGTAAAGGATTGGAA
TTTAAAACAGTAGTAATTTTAAACTCATCCAATATTCCTAAAAAAAGCGATAATAGATCAGAAGATATTCGTCGATTATA
TGTAGGAATGACGCGAGCAACTCATAACTTATTAGCCACTTATCATAAAGAAAATGAATTAAGTGAAAGTCTTGAAGCAG
CAGCTATTAGCATTAATAAATAG

Upstream 100 bases:

>100_bases
CCATACTTATCAAGTCGTTATATAATTTTGTTATAGATCACGATTTAAAATAGGACAAAAGCTTATAATTGTAAGATTAT
TGCCTTAGTAGTACAAATAA

Downstream 100 bases:

>100_bases
CCCTGATTGTAACCCGTACAGCGAAGCGTTTTGTGGCTTGGTTGAGCCATTGGTGTATTGCGAAGAATGAGTGACACACC
AATTCGCGAAATAAAGCGGG

Product: DNA helicase II

Products: NA

Alternate protein names: UvrD/REP Helicase; DNA Helicase; NERD Domain Protein; LexA Repressor; NERD Domain-Containing Protein; Superfamily I DNA/RNA Helicase-Like Protein; UvrD/REP Helicase Domain Protein; Superfamily I DNA And RNA Helicase; Helicase Family Protein; Nerd Domain Protein; Peptidase; Helicase Protein; DNA Helicase II Related Protein; ATP-Dependent Helicase; DNA/RNA Helicase Superfamily I

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MAELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPDFIILHPARGLLFLEVKDWKLDTIRNIDASR
VELLTSKGIETTSNPIEQVRQCSYQVIDKLKRDNLLINQDGKYKGNLCLPYGYGVVLTNITRIQLDRAIPLDAQDSVLPH
HLVICKDEMVSTIDPEKFQTKLWNMFNYKFGNQLSLPQIDRIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEII
KIMDIQQEQLARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAARLRSFINDKGIAGQVQVYHFH
DWCGQQIKTYNLDIQKGEAPYWERQVETVIEGVEKGNIPKGQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDA
QSIYKKKSNLDFSLASVGIQAQGRTTVLRLNYRNTREILSFSYQFAKQYFDNSDTKEIPLIHPESAGITGSHPVVKKFST
MDQEVEYAVKCLVHWKQNGYAWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQYNPINDVVNVLPIPSSKGLE
FKTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLATYHKENELSESLEAAAISINK

Sequences:

>Translated_620_residues
MAELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPDFIILHPARGLLFLEVKDWKLDTIRNIDASR
VELLTSKGIETTSNPIEQVRQCSYQVIDKLKRDNLLINQDGKYKGNLCLPYGYGVVLTNITRIQLDRAIPLDAQDSVLPH
HLVICKDEMVSTIDPEKFQTKLWNMFNYKFGNQLSLPQIDRIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEII
KIMDIQQEQLARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAARLRSFINDKGIAGQVQVYHFH
DWCGQQIKTYNLDIQKGEAPYWERQVETVIEGVEKGNIPKGQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDA
QSIYKKKSNLDFSLASVGIQAQGRTTVLRLNYRNTREILSFSYQFAKQYFDNSDTKEIPLIHPESAGITGSHPVVKKFST
MDQEVEYAVKCLVHWKQNGYAWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQYNPINDVVNVLPIPSSKGLE
FKTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLATYHKENELSESLEAAAISINK
>Mature_619_residues
AELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPDFIILHPARGLLFLEVKDWKLDTIRNIDASRV
ELLTSKGIETTSNPIEQVRQCSYQVIDKLKRDNLLINQDGKYKGNLCLPYGYGVVLTNITRIQLDRAIPLDAQDSVLPHH
LVICKDEMVSTIDPEKFQTKLWNMFNYKFGNQLSLPQIDRIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEIIK
IMDIQQEQLARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAARLRSFINDKGIAGQVQVYHFHD
WCGQQIKTYNLDIQKGEAPYWERQVETVIEGVEKGNIPKGQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDAQ
SIYKKKSNLDFSLASVGIQAQGRTTVLRLNYRNTREILSFSYQFAKQYFDNSDTKEIPLIHPESAGITGSHPVVKKFSTM
DQEVEYAVKCLVHWKQNGYAWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQYNPINDVVNVLPIPSSKGLEF
KTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLATYHKENELSESLEAAAISINK

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70892; Mature: 70761

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPDFIILHPARGL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCE
LFLEVKDWKLDTIRNIDASRVELLTSKGIETTSNPIEQVRQCSYQVIDKLKRDNLLINQD
EEEEEECCCCHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCC
GKYKGNLCLPYGYGVVLTNITRIQLDRAIPLDAQDSVLPHHLVICKDEMVSTIDPEKFQT
CCCCCCEEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHH
KLWNMFNYKFGNQLSLPQIDRIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEII
HHHHHHCCCCCCCCCCCCHHCEEEEECCEEEECCCCCCEECCCCCCCCCCCCCCCHHHHH
KIMDIQQEQLARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAAR
HHHCCCHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEHHHHHHHH
LRSFINDKGIAGQVQVYHFHDWCGQQIKTYNLDIQKGEAPYWERQVETVIEGVEKGNIPK
HHHHHCCCCCCCEEEEEEEHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDAQSIYKKKSNLDFSLASVGIQ
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECEE
AQGRTTVLRLNYRNTREILSFSYQFAKQYFDNSDTKEIPLIHPESAGITGSHPVVKKFST
ECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHH
MDQEVEYAVKCLVHWKQNGYAWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQ
HHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHH
YNPINDVVNVLPIPSSKGLEFKTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLAT
CCCHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YHKENELSESLEAAAISINK
HHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
AELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPDFIILHPARGL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCE
LFLEVKDWKLDTIRNIDASRVELLTSKGIETTSNPIEQVRQCSYQVIDKLKRDNLLINQD
EEEEEECCCCHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCC
GKYKGNLCLPYGYGVVLTNITRIQLDRAIPLDAQDSVLPHHLVICKDEMVSTIDPEKFQT
CCCCCCEEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHH
KLWNMFNYKFGNQLSLPQIDRIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEII
HHHHHHCCCCCCCCCCCCHHCEEEEECCEEEECCCCCCEECCCCCCCCCCCCCCCHHHHH
KIMDIQQEQLARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAAR
HHHCCCHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEHHHHHHHH
LRSFINDKGIAGQVQVYHFHDWCGQQIKTYNLDIQKGEAPYWERQVETVIEGVEKGNIPK
HHHHHCCCCCCCEEEEEEEHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDAQSIYKKKSNLDFSLASVGIQ
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECEE
AQGRTTVLRLNYRNTREILSFSYQFAKQYFDNSDTKEIPLIHPESAGITGSHPVVKKFST
ECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHH
MDQEVEYAVKCLVHWKQNGYAWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQ
HHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHH
YNPINDVVNVLPIPSSKGLEFKTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLAT
CCCHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YHKENELSESLEAAAISINK
HHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA