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The map label for this gene is ynfG [H]

Identifier: 59713264

GI number: 59713264

Start: 87272

End: 87886

Strand: Reverse

Name: ynfG [H]

Synonym: VF_A0081

Alternate gene names: 59713264

Gene position: 87886-87272 (Counterclockwise)

Preceding gene: 59713265

Following gene: 59713263

Centisome position: 6.61

GC content: 39.35

Gene sequence:

>615_bases
ATGAAACAATACGGTTTTTATATTGATTCAAGTAAGTGTACTGGTTGTAAAACATGCCAACTTTCTTGTAAAGATAACAA
AGACTTGGATGTCGGTGTTAATTTTCGTCGTATATATGAATATGCCGGTGGTGATTGGCTAAAAGAAGGCGAAATTTATC
GCCAAAGTGTGTACTCATACTATCTATCTATTGCGTGTAACCATTGTGATGAACCTGCTTGTACTAAAGTATGTCCATCA
GGTGCAATGCATAAACGAGAAGATGGATTCGTTGTTGTCGACGAGGAAGTTTGTATCGGTTGTAAATATTGTACGATGGC
CTGCCCATATGGTGCACCTCAGTACAATGAAGAAAAAGGTCACATGACAAAATGTGATGGTTGCTATGAACGTGTTGGCC
AAGGCTTAGAGCCGATTTGTGTCGGTTCTTGCCCATTAAGAGCTCTTGAATTTGGTCCAATTGCAGAGTTACGTGAAAAA
TACGGAACAAATGCAGATGTCGCTCCTTTGCCTTCATCATTAATTACAAAACCAAACATTGTGATTAAACCAAACCGTAA
TGCTCGTCCAACAGATGATCAAACAGGTCATCTAGCAAACCCTAAGGAGGTATAA

Upstream 100 bases:

>100_bases
GTACTAACAACTCAACGTCCAAGTCCGTTAGCAAAAGGTAATCCGCAACATACGAACTTAGTAGATGTGCAACTGGTTAA
GAAGGCATAAGGGTTAAATA

Downstream 100 bases:

>100_bases
CATGGCTTGGCATGAATGGCCGTTGATTTTATTCACGGTACTCTCTCAAACTGCTGTCGGCGCCTTCTTTGTATTAGGTT
GCGTAACTTTAAGTGGTAAA

Product: oxidoreductase, Fe-S subunit

Products: NA

Alternate protein names: DMSO reductase iron-sulfur subunit [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKQYGFYIDSSKCTGCKTCQLSCKDNKDLDVGVNFRRIYEYAGGDWLKEGEIYRQSVYSYYLSIACNHCDEPACTKVCPS
GAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEEKGHMTKCDGCYERVGQGLEPICVGSCPLRALEFGPIAELREK
YGTNADVAPLPSSLITKPNIVIKPNRNARPTDDQTGHLANPKEV

Sequences:

>Translated_204_residues
MKQYGFYIDSSKCTGCKTCQLSCKDNKDLDVGVNFRRIYEYAGGDWLKEGEIYRQSVYSYYLSIACNHCDEPACTKVCPS
GAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEEKGHMTKCDGCYERVGQGLEPICVGSCPLRALEFGPIAELREK
YGTNADVAPLPSSLITKPNIVIKPNRNARPTDDQTGHLANPKEV
>Mature_204_residues
MKQYGFYIDSSKCTGCKTCQLSCKDNKDLDVGVNFRRIYEYAGGDWLKEGEIYRQSVYSYYLSIACNHCDEPACTKVCPS
GAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEEKGHMTKCDGCYERVGQGLEPICVGSCPLRALEFGPIAELREK
YGTNADVAPLPSSLITKPNIVIKPNRNARPTDDQTGHLANPKEV

Specific function: Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787872, Length=202, Percent_Identity=76.7326732673267, Blast_Score=335, Evalue=2e-93,
Organism=Escherichia coli, GI1787122, Length=202, Percent_Identity=75.7425742574257, Blast_Score=330, Evalue=4e-92,
Organism=Escherichia coli, GI1787749, Length=162, Percent_Identity=35.8024691358025, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1790326, Length=155, Percent_Identity=34.1935483870968, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI226510944, Length=151, Percent_Identity=34.4370860927152, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787478, Length=145, Percent_Identity=33.1034482758621, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789370, Length=179, Percent_Identity=31.8435754189944, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI2367345, Length=152, Percent_Identity=33.5526315789474, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI2367245, Length=152, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1787740, Length=144, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787963, Length=144, Percent_Identity=34.0277777777778, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1789067, Length=167, Percent_Identity=32.9341317365269, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI87082179, Length=161, Percent_Identity=29.1925465838509, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788811, Length=150, Percent_Identity=29.3333333333333, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI87082180, Length=149, Percent_Identity=30.2013422818792, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87082114, Length=100, Percent_Identity=32, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014297 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 22668; Mature: 22668

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYGFYIDSSKCTGCKTCQLSCKDNKDLDVGVNFRRIYEYAGGDWLKEGEIYRQSVYSY
CCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
YLSIACNHCDEPACTKVCPSGAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEEKG
HHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEECCHHEECCHHHEEECCCCCCCCCCCCC
HMTKCDGCYERVGQGLEPICVGSCPLRALEFGPIAELREKYGTNADVAPLPSSLITKPNI
CCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCE
VIKPNRNARPTDDQTGHLANPKEV
EECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQYGFYIDSSKCTGCKTCQLSCKDNKDLDVGVNFRRIYEYAGGDWLKEGEIYRQSVYSY
CCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
YLSIACNHCDEPACTKVCPSGAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEEKG
HHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEECCHHEECCHHHEEECCCCCCCCCCCCC
HMTKCDGCYERVGQGLEPICVGSCPLRALEFGPIAELREKYGTNADVAPLPSSLITKPNI
CCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCE
VIKPNRNARPTDDQTGHLANPKEV
EECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 2174699; 1653010 [H]